RNA–Protein interactions for RNA: ENST00000295908.11

PPM1K-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1K, humanhuman

TSL 5 BASIC

Gene PPM1K, Length 1,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1K-201ENST00000295908 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
PPM1K-201ENST00000295908 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
PPM1K-201ENST00000295908 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
PPM1K-201ENST00000295908 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
PPM1K-201ENST00000295908 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
PPM1K-201ENST00000295908 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
PPM1K-201ENST00000295908 ABCC9O60706 1549 aa24.94■■□□□ 1.58
PPM1K-201ENST00000295908 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
PPM1K-201ENST00000295908 NACADO15069 1562 aa24.49■■□□□ 1.51
PPM1K-201ENST00000295908 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
PPM1K-201ENST00000295908 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
PPM1K-201ENST00000295908 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
PPM1K-201ENST00000295908 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
PPM1K-201ENST00000295908 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
PPM1K-201ENST00000295908 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
PPM1K-201ENST00000295908 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
PPM1K-201ENST00000295908 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
PPM1K-201ENST00000295908 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
PPM1K-201ENST00000295908 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
PPM1K-201ENST00000295908 WIZO95785 1651 aa23.3■■□□□ 1.32
PPM1K-201ENST00000295908 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
PPM1K-201ENST00000295908 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
PPM1K-201ENST00000295908 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
PPM1K-201ENST00000295908 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
PPM1K-201ENST00000295908 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
PPM1K-201ENST00000295908 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
PPM1K-201ENST00000295908 SMARCA2P51531 1590 aa22.83■■□□□ 1.24
PPM1K-201ENST00000295908 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
PPM1K-201ENST00000295908 BAZ1BQ9UIG0 1483 aaKnown RBP22.78■■□□□ 1.24
PPM1K-201ENST00000295908 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
PPM1K-201ENST00000295908 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
PPM1K-201ENST00000295908 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
PPM1K-201ENST00000295908 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
PPM1K-201ENST00000295908 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
PPM1K-201ENST00000295908 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
PPM1K-201ENST00000295908 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
PPM1K-201ENST00000295908 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
PPM1K-201ENST00000295908 CFTRP13569 1480 aa22.18■■□□□ 1.14
PPM1K-201ENST00000295908 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
PPM1K-201ENST00000295908 CADPSQ9ULU8 1353 aa22.1■■□□□ 1.13
PPM1K-201ENST00000295908 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
PPM1K-201ENST00000295908 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
PPM1K-201ENST00000295908 SOGA1O94964 1423 aa22.04■■□□□ 1.12
PPM1K-201ENST00000295908 PRDM2Q13029 1718 aa22■■□□□ 1.11
PPM1K-201ENST00000295908 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
PPM1K-201ENST00000295908 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
PPM1K-201ENST00000295908 NESP48681 1621 aa21.94■■□□□ 1.1
PPM1K-201ENST00000295908 CUX1P39880 1505 aa21.94■■□□□ 1.1
PPM1K-201ENST00000295908 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
PPM1K-201ENST00000295908 EEA1Q15075 1411 aa21.88■■□□□ 1.09
PPM1K-201ENST00000295908 FANCD2Q9BXW9 1451 aa21.87■■□□□ 1.09
PPM1K-201ENST00000295908 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
PPM1K-201ENST00000295908 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
PPM1K-201ENST00000295908 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.07
PPM1K-201ENST00000295908 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
PPM1K-201ENST00000295908 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
PPM1K-201ENST00000295908 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
PPM1K-201ENST00000295908 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
PPM1K-201ENST00000295908 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
PPM1K-201ENST00000295908 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
PPM1K-201ENST00000295908 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
PPM1K-201ENST00000295908 KIF21AQ7Z4S6 1674 aa21.61■■□□□ 1.05
PPM1K-201ENST00000295908 KIF21BO75037 1637 aa21.61■■□□□ 1.05
PPM1K-201ENST00000295908 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
PPM1K-201ENST00000295908 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
PPM1K-201ENST00000295908 CUX2O14529 1486 aa21.58■■□□□ 1.04
PPM1K-201ENST00000295908 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
PPM1K-201ENST00000295908 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
PPM1K-201ENST00000295908 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
PPM1K-201ENST00000295908 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
PPM1K-201ENST00000295908 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
PPM1K-201ENST00000295908 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
PPM1K-201ENST00000295908 IGF1RP08069 1367 aa21.45■■□□□ 1.02
PPM1K-201ENST00000295908 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
PPM1K-201ENST00000295908 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
PPM1K-201ENST00000295908 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
PPM1K-201ENST00000295908 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
PPM1K-201ENST00000295908 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
PPM1K-201ENST00000295908 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
PPM1K-201ENST00000295908 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
PPM1K-201ENST00000295908 CLIP1P30622 1438 aa21.34■■□□□ 1.01
PPM1K-201ENST00000295908 TDRD9Q8NDG6 1382 aaKnown RBP21.32■■□□□ 1
PPM1K-201ENST00000295908 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
PPM1K-201ENST00000295908 TARBP1Q13395 1621 aaKnown RBP21.28■■□□□ 1
PPM1K-201ENST00000295908 WDR62O43379 1518 aa21.27■■□□□ 1
PPM1K-201ENST00000295908 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
PPM1K-201ENST00000295908 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
PPM1K-201ENST00000295908 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
PPM1K-201ENST00000295908 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
PPM1K-201ENST00000295908 CUL7Q14999 1698 aa21.19■□□□□ 0.98
PPM1K-201ENST00000295908 AQRO60306 1485 aaKnown RBP eCLIP21.17■□□□□ 0.98
PPM1K-201ENST00000295908 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
PPM1K-201ENST00000295908 VPS8Q8N3P4 1428 aa21.14■□□□□ 0.97
PPM1K-201ENST00000295908 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
PPM1K-201ENST00000295908 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
PPM1K-201ENST00000295908 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
PPM1K-201ENST00000295908 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
PPM1K-201ENST00000295908 PBRM1Q86U86 1689 aa21.08■□□□□ 0.97
PPM1K-201ENST00000295908 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
PPM1K-201ENST00000295908 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms