RNA–Protein interactions for RNA: ENST00000283027.9

NUBP1-201, Transcript of nucleotide binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUBP1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-201ENST00000283027 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
NUBP1-201ENST00000283027 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
NUBP1-201ENST00000283027 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.2
NUBP1-201ENST00000283027 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
NUBP1-201ENST00000283027 ABCC9O60706 1549 aa22.2■■□□□ 1.14
NUBP1-201ENST00000283027 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.13
NUBP1-201ENST00000283027 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
NUBP1-201ENST00000283027 SHROOM4Q9ULL8 1493 aa21.94■■□□□ 1.1
NUBP1-201ENST00000283027 NACADO15069 1562 aa21.74■■□□□ 1.07
NUBP1-201ENST00000283027 RB1CC1Q8TDY2 1594 aa21.51■■□□□ 1.03
NUBP1-201ENST00000283027 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
NUBP1-201ENST00000283027 SUPT5HO00267 1087 aaKnown RBP21.37■■□□□ 1.01
NUBP1-201ENST00000283027 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
NUBP1-201ENST00000283027 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
NUBP1-201ENST00000283027 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
NUBP1-201ENST00000283027 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
NUBP1-201ENST00000283027 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
NUBP1-201ENST00000283027 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
NUBP1-201ENST00000283027 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
NUBP1-201ENST00000283027 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
NUBP1-201ENST00000283027 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
NUBP1-201ENST00000283027 WIZO95785 1651 aa20.51■□□□□ 0.87
NUBP1-201ENST00000283027 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
NUBP1-201ENST00000283027 PEG3Q9GZU2 1588 aa20.35■□□□□ 0.85
NUBP1-201ENST00000283027 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
NUBP1-201ENST00000283027 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
NUBP1-201ENST00000283027 ATAD2BQ9ULI0 1458 aa20.26■□□□□ 0.83
NUBP1-201ENST00000283027 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
NUBP1-201ENST00000283027 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
NUBP1-201ENST00000283027 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
NUBP1-201ENST00000283027 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
NUBP1-201ENST00000283027 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
NUBP1-201ENST00000283027 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
NUBP1-201ENST00000283027 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
NUBP1-201ENST00000283027 HMGXB3Q12766 1538 aa20.02■□□□□ 0.8
NUBP1-201ENST00000283027 LOC105371045A0A1W2PR82 267 aa19.9■□□□□ 0.78
NUBP1-201ENST00000283027 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
NUBP1-201ENST00000283027 EEA1Q15075 1411 aa19.75■□□□□ 0.75
NUBP1-201ENST00000283027 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
NUBP1-201ENST00000283027 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
NUBP1-201ENST00000283027 CFTRP13569 1480 aa19.67■□□□□ 0.74
NUBP1-201ENST00000283027 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
NUBP1-201ENST00000283027 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
NUBP1-201ENST00000283027 PRDM2Q13029 1718 aa19.52■□□□□ 0.72
NUBP1-201ENST00000283027 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
NUBP1-201ENST00000283027 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
NUBP1-201ENST00000283027 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
NUBP1-201ENST00000283027 SOGA1O94964 1423 aa19.5■□□□□ 0.71
NUBP1-201ENST00000283027 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
NUBP1-201ENST00000283027 PCGF6Q9BYE7 350 aa19.48■□□□□ 0.71
NUBP1-201ENST00000283027 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
NUBP1-201ENST00000283027 KIF21BO75037 1637 aa19.41■□□□□ 0.7
NUBP1-201ENST00000283027 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
NUBP1-201ENST00000283027 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
NUBP1-201ENST00000283027 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
NUBP1-201ENST00000283027 HRCP23327 699 aa19.37■□□□□ 0.69
NUBP1-201ENST00000283027 CUX1P39880 1505 aa19.35■□□□□ 0.69
NUBP1-201ENST00000283027 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
NUBP1-201ENST00000283027 FANCD2Q9BXW9 1451 aa19.33■□□□□ 0.68
NUBP1-201ENST00000283027 NESP48681 1621 aa19.3■□□□□ 0.68
NUBP1-201ENST00000283027 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
NUBP1-201ENST00000283027 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
NUBP1-201ENST00000283027 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
NUBP1-201ENST00000283027 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
NUBP1-201ENST00000283027 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
NUBP1-201ENST00000283027 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
NUBP1-201ENST00000283027 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
NUBP1-201ENST00000283027 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
NUBP1-201ENST00000283027 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
NUBP1-201ENST00000283027 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
NUBP1-201ENST00000283027 RAPGEF2Q9Y4G8 1499 aa19.1■□□□□ 0.65
NUBP1-201ENST00000283027 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
NUBP1-201ENST00000283027 CLIP1P30622 1438 aa19.07■□□□□ 0.64
NUBP1-201ENST00000283027 ZEB1P37275 1124 aaPredicted RBP19.06■□□□□ 0.64
NUBP1-201ENST00000283027 ERCC6Q03468 1493 aa19.05■□□□□ 0.64
NUBP1-201ENST00000283027 CUX2O14529 1486 aa19.03■□□□□ 0.64
NUBP1-201ENST00000283027 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
NUBP1-201ENST00000283027 IGF1RP08069 1367 aa19.01■□□□□ 0.63
NUBP1-201ENST00000283027 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
NUBP1-201ENST00000283027 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
NUBP1-201ENST00000283027 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
NUBP1-201ENST00000283027 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
NUBP1-201ENST00000283027 MRC2Q9UBG0 1479 aa18.96■□□□□ 0.63
NUBP1-201ENST00000283027 THOC2Q8NI27 1593 aaKnown RBP18.9■□□□□ 0.62
NUBP1-201ENST00000283027 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
NUBP1-201ENST00000283027 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
NUBP1-201ENST00000283027 WDR97A6NE52 1622 aa18.83■□□□□ 0.61
NUBP1-201ENST00000283027 APLP2Q06481 763 aa18.83■□□□□ 0.6
NUBP1-201ENST00000283027 WDR62O43379 1518 aa18.83■□□□□ 0.6
NUBP1-201ENST00000283027 CUL7Q14999 1698 aa18.82■□□□□ 0.6
NUBP1-201ENST00000283027 TARBP1Q13395 1621 aaKnown RBP18.81■□□□□ 0.6
NUBP1-201ENST00000283027 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
NUBP1-201ENST00000283027 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
NUBP1-201ENST00000283027 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
NUBP1-201ENST00000283027 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
NUBP1-201ENST00000283027 IFT140Q96RY7 1462 aa18.77■□□□□ 0.59
NUBP1-201ENST00000283027 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
NUBP1-201ENST00000283027 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
NUBP1-201ENST00000283027 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
NUBP1-201ENST00000283027 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms