RNA–Protein interactions for RNA: ENST00000276105.3

SNX12-201, Transcript of sorting nexin 12, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene SNX12, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-201ENST00000276105 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
SNX12-201ENST00000276105 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
SNX12-201ENST00000276105 ABCC9O60706 1549 aa22.3■■□□□ 1.16
SNX12-201ENST00000276105 DNAJC5BQ9UF47 199 aa21.46■■□□□ 1.03
SNX12-201ENST00000276105 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
SNX12-201ENST00000276105 NACADO15069 1562 aa21.28■■□□□ 1
SNX12-201ENST00000276105 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
SNX12-201ENST00000276105 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
SNX12-201ENST00000276105 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
SNX12-201ENST00000276105 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
SNX12-201ENST00000276105 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
SNX12-201ENST00000276105 UNC13AQ9UPW8 1703 aa20.82■□□□□ 0.92
SNX12-201ENST00000276105 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
SNX12-201ENST00000276105 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
SNX12-201ENST00000276105 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
SNX12-201ENST00000276105 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
SNX12-201ENST00000276105 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
SNX12-201ENST00000276105 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
SNX12-201ENST00000276105 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
SNX12-201ENST00000276105 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
SNX12-201ENST00000276105 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
SNX12-201ENST00000276105 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
SNX12-201ENST00000276105 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
SNX12-201ENST00000276105 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
SNX12-201ENST00000276105 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
SNX12-201ENST00000276105 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
SNX12-201ENST00000276105 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
SNX12-201ENST00000276105 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.69
SNX12-201ENST00000276105 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
SNX12-201ENST00000276105 CUX2O14529 1486 aa19.25■□□□□ 0.67
SNX12-201ENST00000276105 NESP48681 1621 aa19.18■□□□□ 0.66
SNX12-201ENST00000276105 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
SNX12-201ENST00000276105 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
SNX12-201ENST00000276105 WIZO95785 1651 aa19.09■□□□□ 0.65
SNX12-201ENST00000276105 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
SNX12-201ENST00000276105 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
SNX12-201ENST00000276105 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
SNX12-201ENST00000276105 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
SNX12-201ENST00000276105 KIF21AQ7Z4S6 1674 aa18.96■□□□□ 0.63
SNX12-201ENST00000276105 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
SNX12-201ENST00000276105 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
SNX12-201ENST00000276105 CFTRP13569 1480 aa18.84■□□□□ 0.61
SNX12-201ENST00000276105 WDR62O43379 1518 aa18.81■□□□□ 0.6
SNX12-201ENST00000276105 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
SNX12-201ENST00000276105 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
SNX12-201ENST00000276105 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
SNX12-201ENST00000276105 CCDC88BA6NC98 1476 aa18.67■□□□□ 0.58
SNX12-201ENST00000276105 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
SNX12-201ENST00000276105 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
SNX12-201ENST00000276105 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
SNX12-201ENST00000276105 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
SNX12-201ENST00000276105 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
SNX12-201ENST00000276105 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
SNX12-201ENST00000276105 OSCARQ8IYS5 282 aa18.37■□□□□ 0.53
SNX12-201ENST00000276105 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
SNX12-201ENST00000276105 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
SNX12-201ENST00000276105 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
SNX12-201ENST00000276105 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
SNX12-201ENST00000276105 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
SNX12-201ENST00000276105 SOGA1O94964 1423 aa18.19■□□□□ 0.5
SNX12-201ENST00000276105 WDR97A6NE52 1622 aa18.19■□□□□ 0.5
SNX12-201ENST00000276105 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNX12-201ENST00000276105 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
SNX12-201ENST00000276105 FGD5Q6ZNL6 1462 aa18.16■□□□□ 0.5
SNX12-201ENST00000276105 CUX1P39880 1505 aa18.16■□□□□ 0.5
SNX12-201ENST00000276105 RAD54L2Q9Y4B4 1467 aa18.15■□□□□ 0.5
SNX12-201ENST00000276105 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
SNX12-201ENST00000276105 CHD1O14646 1710 aa18.09■□□□□ 0.49
SNX12-201ENST00000276105 RIMBP3CA6NJZ7 1639 aa18.07■□□□□ 0.48
SNX12-201ENST00000276105 RIMBP3BA6NNM3 1639 aa18.07■□□□□ 0.48
SNX12-201ENST00000276105 RIMBP3Q9UFD9 1639 aa18.07■□□□□ 0.48
SNX12-201ENST00000276105 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
SNX12-201ENST00000276105 GRIN2BQ13224 1484 aa18.04■□□□□ 0.48
SNX12-201ENST00000276105 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
SNX12-201ENST00000276105 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
SNX12-201ENST00000276105 FBLN2P98095 1184 aa18.02■□□□□ 0.48
SNX12-201ENST00000276105 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
SNX12-201ENST00000276105 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
SNX12-201ENST00000276105 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
SNX12-201ENST00000276105 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
SNX12-201ENST00000276105 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
SNX12-201ENST00000276105 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
SNX12-201ENST00000276105 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
SNX12-201ENST00000276105 BIVM-ERCC5R4GMW8 1640 aa17.94■□□□□ 0.46
SNX12-201ENST00000276105 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
SNX12-201ENST00000276105 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
SNX12-201ENST00000276105 CLASP1Q7Z460 1538 aa17.92■□□□□ 0.46
SNX12-201ENST00000276105 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
SNX12-201ENST00000276105 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
SNX12-201ENST00000276105 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
SNX12-201ENST00000276105 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
SNX12-201ENST00000276105 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
SNX12-201ENST00000276105 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
SNX12-201ENST00000276105 NUP160Q12769 1436 aa17.74■□□□□ 0.43
SNX12-201ENST00000276105 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
SNX12-201ENST00000276105 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
SNX12-201ENST00000276105 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
SNX12-201ENST00000276105 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
SNX12-201ENST00000276105 ERCC6L2Q5T890 1561 aa17.58■□□□□ 0.41
SNX12-201ENST00000276105 IGF1RP08069 1367 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms