RNA–Protein interactions for RNA: ENST00000274990.4

CRIP3-201, Transcript of cysteine rich protein 3, humanhuman

TSL 1 (best) BASIC

Gene CRIP3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-201ENST00000274990 NISCHQ9Y2I1 1504 aa22.85■■□□□ 1.25
CRIP3-201ENST00000274990 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
CRIP3-201ENST00000274990 ABCC9O60706 1549 aa20.09■□□□□ 0.81
CRIP3-201ENST00000274990 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
CRIP3-201ENST00000274990 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
CRIP3-201ENST00000274990 NACADO15069 1562 aa19.06■□□□□ 0.64
CRIP3-201ENST00000274990 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
CRIP3-201ENST00000274990 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
CRIP3-201ENST00000274990 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
CRIP3-201ENST00000274990 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
CRIP3-201ENST00000274990 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
CRIP3-201ENST00000274990 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
CRIP3-201ENST00000274990 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
CRIP3-201ENST00000274990 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
CRIP3-201ENST00000274990 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
CRIP3-201ENST00000274990 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
CRIP3-201ENST00000274990 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
CRIP3-201ENST00000274990 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
CRIP3-201ENST00000274990 SMARCA4P51532 1647 aa17.77■□□□□ 0.44
CRIP3-201ENST00000274990 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
CRIP3-201ENST00000274990 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
CRIP3-201ENST00000274990 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
CRIP3-201ENST00000274990 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
CRIP3-201ENST00000274990 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
CRIP3-201ENST00000274990 WIZO95785 1651 aa17.53■□□□□ 0.4
CRIP3-201ENST00000274990 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
CRIP3-201ENST00000274990 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
CRIP3-201ENST00000274990 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
CRIP3-201ENST00000274990 RSF1Q96T23 1441 aaPredicted RBP17.42■□□□□ 0.38
CRIP3-201ENST00000274990 NESP48681 1621 aa17.39■□□□□ 0.38
CRIP3-201ENST00000274990 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
CRIP3-201ENST00000274990 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
CRIP3-201ENST00000274990 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
CRIP3-201ENST00000274990 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
CRIP3-201ENST00000274990 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
CRIP3-201ENST00000274990 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
CRIP3-201ENST00000274990 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.32
CRIP3-201ENST00000274990 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
CRIP3-201ENST00000274990 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
CRIP3-201ENST00000274990 CFTRP13569 1480 aa17■□□□□ 0.31
CRIP3-201ENST00000274990 CUX2O14529 1486 aa16.98■□□□□ 0.31
CRIP3-201ENST00000274990 FANCD2Q9BXW9 1451 aa16.97■□□□□ 0.31
CRIP3-201ENST00000274990 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
CRIP3-201ENST00000274990 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
CRIP3-201ENST00000274990 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
CRIP3-201ENST00000274990 WDR62O43379 1518 aa16.86■□□□□ 0.29
CRIP3-201ENST00000274990 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
CRIP3-201ENST00000274990 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
CRIP3-201ENST00000274990 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
CRIP3-201ENST00000274990 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
CRIP3-201ENST00000274990 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
CRIP3-201ENST00000274990 CUX1P39880 1505 aa16.59■□□□□ 0.25
CRIP3-201ENST00000274990 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
CRIP3-201ENST00000274990 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
CRIP3-201ENST00000274990 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
CRIP3-201ENST00000274990 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
CRIP3-201ENST00000274990 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
CRIP3-201ENST00000274990 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
CRIP3-201ENST00000274990 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.234e-9■■■■□ 20.8
CRIP3-201ENST00000274990 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
CRIP3-201ENST00000274990 SOGA1O94964 1423 aa16.48■□□□□ 0.23
CRIP3-201ENST00000274990 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
CRIP3-201ENST00000274990 SYNJ1O43426 1573 aa16.45■□□□□ 0.22
CRIP3-201ENST00000274990 WRNQ14191 1432 aaPredicted RBP eCLIP16.41■□□□□ 0.22
CRIP3-201ENST00000274990 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
CRIP3-201ENST00000274990 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
CRIP3-201ENST00000274990 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
CRIP3-201ENST00000274990 FBLN2P98095 1184 aa16.35■□□□□ 0.21
CRIP3-201ENST00000274990 CHD1O14646 1710 aa16.34■□□□□ 0.21
CRIP3-201ENST00000274990 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
CRIP3-201ENST00000274990 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
CRIP3-201ENST00000274990 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
CRIP3-201ENST00000274990 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
CRIP3-201ENST00000274990 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
CRIP3-201ENST00000274990 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.19
CRIP3-201ENST00000274990 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
CRIP3-201ENST00000274990 CHMP7Q8WUX9 453 aaPredicted RBP16.2■□□□□ 0.18
CRIP3-201ENST00000274990 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
CRIP3-201ENST00000274990 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
CRIP3-201ENST00000274990 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
CRIP3-201ENST00000274990 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
CRIP3-201ENST00000274990 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
CRIP3-201ENST00000274990 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
CRIP3-201ENST00000274990 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
CRIP3-201ENST00000274990 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
CRIP3-201ENST00000274990 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
CRIP3-201ENST00000274990 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
CRIP3-201ENST00000274990 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
CRIP3-201ENST00000274990 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
CRIP3-201ENST00000274990 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
CRIP3-201ENST00000274990 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
CRIP3-201ENST00000274990 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
CRIP3-201ENST00000274990 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
CRIP3-201ENST00000274990 IGF1RP08069 1367 aa16.02■□□□□ 0.16
CRIP3-201ENST00000274990 ARAP1Q96P48 1450 aa16■□□□□ 0.15
CRIP3-201ENST00000274990 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
CRIP3-201ENST00000274990 NUP160Q12769 1436 aa15.98■□□□□ 0.15
CRIP3-201ENST00000274990 CUL7Q14999 1698 aa15.92■□□□□ 0.14
CRIP3-201ENST00000274990 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
CRIP3-201ENST00000274990 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms