RNA–Protein interactions for RNA: ENST00000274545.9

GABRA6-201, Transcript of gamma-aminobutyric acid type A receptor alpha6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA6, Length 2,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA6-201ENST00000274545 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
GABRA6-201ENST00000274545 CCDC180Q9P1Z9 1646 aa14.34□□□□□ -0.11
GABRA6-201ENST00000274545 AEBP2Q6ZN18 517 aaPredicted RBP14.08□□□□□ -0.16
GABRA6-201ENST00000274545 ZCCHC6Q5VYS8 1495 aaKnown RBP14.01□□□□□ -0.17
GABRA6-201ENST00000274545 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
GABRA6-201ENST00000274545 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
GABRA6-201ENST00000274545 DCAF1Q9Y4B6 1507 aa13.7□□□□□ -0.22
GABRA6-201ENST00000274545 ABCC9O60706 1549 aa13.57□□□□□ -0.24
GABRA6-201ENST00000274545 MYO15BQ96JP2 1530 aa13.47□□□□□ -0.25
GABRA6-201ENST00000274545 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
GABRA6-201ENST00000274545 NACADO15069 1562 aa13.37□□□□□ -0.27
GABRA6-201ENST00000274545 SCRIBQ14160 1630 aa13.33□□□□□ -0.28
GABRA6-201ENST00000274545 CHIC1Q5VXU3 224 aa13.29□□□□□ -0.28
GABRA6-201ENST00000274545 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
GABRA6-201ENST00000274545 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.32
GABRA6-201ENST00000274545 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
GABRA6-201ENST00000274545 UNC13AQ9UPW8 1703 aa12.94□□□□□ -0.34
GABRA6-201ENST00000274545 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
GABRA6-201ENST00000274545 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
GABRA6-201ENST00000274545 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.36
GABRA6-201ENST00000274545 BICRAQ9NZM4 1560 aa12.83□□□□□ -0.36
GABRA6-201ENST00000274545 WIZO95785 1651 aa12.79□□□□□ -0.36
GABRA6-201ENST00000274545 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
GABRA6-201ENST00000274545 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
GABRA6-201ENST00000274545 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
GABRA6-201ENST00000274545 CCDC88BA6NC98 1476 aa12.56□□□□□ -0.4
GABRA6-201ENST00000274545 PEG3Q9GZU2 1588 aa12.55□□□□□ -0.4
GABRA6-201ENST00000274545 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
GABRA6-201ENST00000274545 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
GABRA6-201ENST00000274545 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
GABRA6-201ENST00000274545 BAZ1BQ9UIG0 1483 aaKnown RBP12.47□□□□□ -0.41
GABRA6-201ENST00000274545 EIF4G1Q04637 1599 aaKnown RBP12.45□□□□□ -0.42
GABRA6-201ENST00000274545 FAM9AQ8IZU1 332 aaPredicted RBP12.42□□□□□ -0.42
GABRA6-201ENST00000274545 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
GABRA6-201ENST00000274545 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
GABRA6-201ENST00000274545 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
GABRA6-201ENST00000274545 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
GABRA6-201ENST00000274545 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
GABRA6-201ENST00000274545 WRNQ14191 1432 aaPredicted RBP eCLIP12.26□□□□□ -0.45
GABRA6-201ENST00000274545 CC2D2AQ9P2K1 1620 aa12.23□□□□□ -0.45
GABRA6-201ENST00000274545 SOGA1O94964 1423 aa12.2□□□□□ -0.46
GABRA6-201ENST00000274545 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
GABRA6-201ENST00000274545 CFTRP13569 1480 aa12.16□□□□□ -0.46
GABRA6-201ENST00000274545 MYT1Q01538 1121 aa12.15□□□□□ -0.46
GABRA6-201ENST00000274545 RUSC2Q8N2Y8 1516 aa12.14□□□□□ -0.47
GABRA6-201ENST00000274545 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
GABRA6-201ENST00000274545 EEA1Q15075 1411 aa12.13□□□□□ -0.47
GABRA6-201ENST00000274545 PCGF6Q9BYE7 350 aa12.11□□□□□ -0.47
GABRA6-201ENST00000274545 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
GABRA6-201ENST00000274545 TOP2BQ02880 1626 aa12.08□□□□□ -0.47
GABRA6-201ENST00000274545 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
GABRA6-201ENST00000274545 CUX1P39880 1505 aa12.03□□□□□ -0.48
GABRA6-201ENST00000274545 BIVM-ERCC5R4GMW8 1640 aa12.03□□□□□ -0.48
GABRA6-201ENST00000274545 TNIKQ9UKE5 1360 aa12.01□□□□□ -0.49
GABRA6-201ENST00000274545 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
GABRA6-201ENST00000274545 GOLGA3Q08378 1498 aa12□□□□□ -0.49
GABRA6-201ENST00000274545 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
GABRA6-201ENST00000274545 PRDM2Q13029 1718 aa11.99□□□□□ -0.49
GABRA6-201ENST00000274545 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
GABRA6-201ENST00000274545 CEP162Q5TB80 1403 aa11.97□□□□□ -0.49
GABRA6-201ENST00000274545 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
GABRA6-201ENST00000274545 NESP48681 1621 aa11.96□□□□□ -0.49
GABRA6-201ENST00000274545 SENP3Q9H4L4 574 aaPredicted RBP11.94□□□□□ -0.5
GABRA6-201ENST00000274545 KIF21BO75037 1637 aa11.93□□□□□ -0.5
GABRA6-201ENST00000274545 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
GABRA6-201ENST00000274545 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
GABRA6-201ENST00000274545 PPARGC1BQ86YN6 1023 aaKnown RBP11.92□□□□□ -0.5
GABRA6-201ENST00000274545 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
GABRA6-201ENST00000274545 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
GABRA6-201ENST00000274545 PRXQ9BXM0 1461 aa11.87□□□□□ -0.51
GABRA6-201ENST00000274545 CUX2O14529 1486 aa11.87□□□□□ -0.51
GABRA6-201ENST00000274545 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
GABRA6-201ENST00000274545 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
GABRA6-201ENST00000274545 CLIP1P30622 1438 aa11.84□□□□□ -0.51
GABRA6-201ENST00000274545 TOPBP1Q92547 1522 aa11.84□□□□□ -0.51
GABRA6-201ENST00000274545 HRCP23327 699 aa11.84□□□□□ -0.51
GABRA6-201ENST00000274545 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
GABRA6-201ENST00000274545 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
GABRA6-201ENST00000274545 IGF1RP08069 1367 aa11.83□□□□□ -0.52
GABRA6-201ENST00000274545 POLA1P09884 1462 aaPredicted RBP11.81□□□□□ -0.52
GABRA6-201ENST00000274545 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
GABRA6-201ENST00000274545 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
GABRA6-201ENST00000274545 TTBK1Q5TCY1 1321 aaPredicted RBP11.8□□□□□ -0.52
GABRA6-201ENST00000274545 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
GABRA6-201ENST00000274545 CARMIL1Q5VZK9 1371 aa11.77□□□□□ -0.52
GABRA6-201ENST00000274545 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
GABRA6-201ENST00000274545 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
GABRA6-201ENST00000274545 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
GABRA6-201ENST00000274545 APLP2Q06481 763 aa11.72□□□□□ -0.53
GABRA6-201ENST00000274545 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.54
GABRA6-201ENST00000274545 ARAP1Q96P48 1450 aa11.67□□□□□ -0.54
GABRA6-201ENST00000274545 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
GABRA6-201ENST00000274545 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
GABRA6-201ENST00000274545 ARHGAP35Q9NRY4 1499 aa11.65□□□□□ -0.54
GABRA6-201ENST00000274545 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
GABRA6-201ENST00000274545 CUL7Q14999 1698 aa11.62□□□□□ -0.55
GABRA6-201ENST00000274545 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
GABRA6-201ENST00000274545 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
GABRA6-201ENST00000274545 ERCC6Q03468 1493 aa11.61□□□□□ -0.55
GABRA6-201ENST00000274545 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms