RNA–Protein interactions for RNA: ENST00000273139.13

RBMS3-201, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBMS3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-201ENST00000273139 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
RBMS3-201ENST00000273139 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
RBMS3-201ENST00000273139 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
RBMS3-201ENST00000273139 ABCC9O60706 1549 aa21.68■■□□□ 1.06
RBMS3-201ENST00000273139 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
RBMS3-201ENST00000273139 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
RBMS3-201ENST00000273139 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
RBMS3-201ENST00000273139 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
RBMS3-201ENST00000273139 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
RBMS3-201ENST00000273139 PABPN1Q86U42 306 aaKnown RBP eCLIP20.16■□□□□ 0.82
RBMS3-201ENST00000273139 NACADO15069 1562 aa20.14■□□□□ 0.82
RBMS3-201ENST00000273139 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
RBMS3-201ENST00000273139 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
RBMS3-201ENST00000273139 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.76
RBMS3-201ENST00000273139 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
RBMS3-201ENST00000273139 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
RBMS3-201ENST00000273139 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.72
RBMS3-201ENST00000273139 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
RBMS3-201ENST00000273139 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
RBMS3-201ENST00000273139 SCRIBQ14160 1630 aa19.39■□□□□ 0.69
RBMS3-201ENST00000273139 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
RBMS3-201ENST00000273139 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
RBMS3-201ENST00000273139 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
RBMS3-201ENST00000273139 DNAJC5Q9H3Z4 198 aa19.23■□□□□ 0.67
RBMS3-201ENST00000273139 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
RBMS3-201ENST00000273139 CUX2O14529 1486 aa18.77■□□□□ 0.6
RBMS3-201ENST00000273139 FOXD1Q16676 465 aa18.63■□□□□ 0.57
RBMS3-201ENST00000273139 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
RBMS3-201ENST00000273139 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
RBMS3-201ENST00000273139 NESP48681 1621 aa18.49■□□□□ 0.55
RBMS3-201ENST00000273139 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
RBMS3-201ENST00000273139 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
RBMS3-201ENST00000273139 SMARCA4P51532 1647 aa18.39■□□□□ 0.54
RBMS3-201ENST00000273139 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
RBMS3-201ENST00000273139 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
RBMS3-201ENST00000273139 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
RBMS3-201ENST00000273139 ADRA2BP18089 450 aa18.35■□□□□ 0.53
RBMS3-201ENST00000273139 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
RBMS3-201ENST00000273139 LAMC3Q9Y6N6 1575 aa18.26■□□□□ 0.51
RBMS3-201ENST00000273139 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
RBMS3-201ENST00000273139 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
RBMS3-201ENST00000273139 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
RBMS3-201ENST00000273139 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
RBMS3-201ENST00000273139 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
RBMS3-201ENST00000273139 MRC2Q9UBG0 1479 aa18.06■□□□□ 0.48
RBMS3-201ENST00000273139 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
RBMS3-201ENST00000273139 WDR62O43379 1518 aa17.98■□□□□ 0.47
RBMS3-201ENST00000273139 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
RBMS3-201ENST00000273139 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
RBMS3-201ENST00000273139 WIZO95785 1651 aa17.88■□□□□ 0.45
RBMS3-201ENST00000273139 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
RBMS3-201ENST00000273139 CFTRP13569 1480 aa17.73■□□□□ 0.43
RBMS3-201ENST00000273139 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
RBMS3-201ENST00000273139 RIMBP3CA6NJZ7 1639 aa17.7■□□□□ 0.42
RBMS3-201ENST00000273139 RIMBP3BA6NNM3 1639 aa17.7■□□□□ 0.42
RBMS3-201ENST00000273139 RIMBP3Q9UFD9 1639 aa17.7■□□□□ 0.42
RBMS3-201ENST00000273139 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
RBMS3-201ENST00000273139 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
RBMS3-201ENST00000273139 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
RBMS3-201ENST00000273139 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.41
RBMS3-201ENST00000273139 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.41
RBMS3-201ENST00000273139 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
RBMS3-201ENST00000273139 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
RBMS3-201ENST00000273139 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
RBMS3-201ENST00000273139 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
RBMS3-201ENST00000273139 FBLN2P98095 1184 aa17.49■□□□□ 0.39
RBMS3-201ENST00000273139 KCNA4P22459 653 aa17.47■□□□□ 0.39
RBMS3-201ENST00000273139 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
RBMS3-201ENST00000273139 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
RBMS3-201ENST00000273139 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
RBMS3-201ENST00000273139 CHD1O14646 1710 aa17.42■□□□□ 0.38
RBMS3-201ENST00000273139 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.38
RBMS3-201ENST00000273139 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
RBMS3-201ENST00000273139 ARAP1Q96P48 1450 aa17.38■□□□□ 0.37
RBMS3-201ENST00000273139 DNMBPQ6XZF7 1577 aa17.37■□□□□ 0.37
RBMS3-201ENST00000273139 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
RBMS3-201ENST00000273139 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
RBMS3-201ENST00000273139 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
RBMS3-201ENST00000273139 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
RBMS3-201ENST00000273139 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
RBMS3-201ENST00000273139 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
RBMS3-201ENST00000273139 SOGA1O94964 1423 aa17.22■□□□□ 0.35
RBMS3-201ENST00000273139 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
RBMS3-201ENST00000273139 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
RBMS3-201ENST00000273139 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
RBMS3-201ENST00000273139 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
RBMS3-201ENST00000273139 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
RBMS3-201ENST00000273139 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
RBMS3-201ENST00000273139 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
RBMS3-201ENST00000273139 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
RBMS3-201ENST00000273139 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
RBMS3-201ENST00000273139 CUX1P39880 1505 aa17.02■□□□□ 0.32
RBMS3-201ENST00000273139 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
RBMS3-201ENST00000273139 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.3
RBMS3-201ENST00000273139 MSH5O43196 834 aa16.89■□□□□ 0.29
RBMS3-201ENST00000273139 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
RBMS3-201ENST00000273139 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
RBMS3-201ENST00000273139 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
RBMS3-201ENST00000273139 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
RBMS3-201ENST00000273139 CEP170Q5SW79 1584 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms