RNA–Protein interactions for RNA: ENST00000268057.8

BBS4-201, Transcript of Bardet-Biedl syndrome 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBS4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-201ENST00000268057 NISCHQ9Y2I1 1504 aa17.46■□□□□ 0.39
BBS4-201ENST00000268057 ABCC9O60706 1549 aa16.29■□□□□ 0.2
BBS4-201ENST00000268057 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
BBS4-201ENST00000268057 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
BBS4-201ENST00000268057 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
BBS4-201ENST00000268057 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
BBS4-201ENST00000268057 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
BBS4-201ENST00000268057 NACADO15069 1562 aa15.4■□□□□ 0.06
BBS4-201ENST00000268057 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
BBS4-201ENST00000268057 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
BBS4-201ENST00000268057 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
BBS4-201ENST00000268057 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
BBS4-201ENST00000268057 BICRAQ9NZM4 1560 aa14.99□□□□□ -0.01
BBS4-201ENST00000268057 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
BBS4-201ENST00000268057 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
BBS4-201ENST00000268057 CC2D2AQ9P2K1 1620 aa14.85□□□□□ -0.03
BBS4-201ENST00000268057 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
BBS4-201ENST00000268057 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
BBS4-201ENST00000268057 CUX2O14529 1486 aa14.69□□□□□ -0.06
BBS4-201ENST00000268057 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
BBS4-201ENST00000268057 DCAF8L2P0C7V8 631 aa14.53□□□□□ -0.08
BBS4-201ENST00000268057 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
BBS4-201ENST00000268057 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
BBS4-201ENST00000268057 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
BBS4-201ENST00000268057 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
BBS4-201ENST00000268057 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
BBS4-201ENST00000268057 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
BBS4-201ENST00000268057 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
BBS4-201ENST00000268057 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
BBS4-201ENST00000268057 HRCP23327 699 aa13.97□□□□□ -0.17
BBS4-201ENST00000268057 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
BBS4-201ENST00000268057 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
BBS4-201ENST00000268057 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
BBS4-201ENST00000268057 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
BBS4-201ENST00000268057 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
BBS4-201ENST00000268057 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
BBS4-201ENST00000268057 NESP48681 1621 aa13.77□□□□□ -0.2
BBS4-201ENST00000268057 WDR62O43379 1518 aa13.76□□□□□ -0.21
BBS4-201ENST00000268057 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
BBS4-201ENST00000268057 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
BBS4-201ENST00000268057 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
BBS4-201ENST00000268057 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
BBS4-201ENST00000268057 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
BBS4-201ENST00000268057 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
BBS4-201ENST00000268057 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
BBS4-201ENST00000268057 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
BBS4-201ENST00000268057 TRIM26Q12899 539 aaPredicted RBP13.59□□□□□ -0.23
BBS4-201ENST00000268057 RIMBP3CA6NJZ7 1639 aa13.58□□□□□ -0.24
BBS4-201ENST00000268057 RIMBP3BA6NNM3 1639 aa13.58□□□□□ -0.24
BBS4-201ENST00000268057 RIMBP3Q9UFD9 1639 aa13.58□□□□□ -0.24
BBS4-201ENST00000268057 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.24
BBS4-201ENST00000268057 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
BBS4-201ENST00000268057 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
BBS4-201ENST00000268057 ARHGEF11O15085 1522 aa13.46□□□□□ -0.25
BBS4-201ENST00000268057 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
BBS4-201ENST00000268057 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
BBS4-201ENST00000268057 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
BBS4-201ENST00000268057 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
BBS4-201ENST00000268057 IFT140Q96RY7 1462 aa13.35□□□□□ -0.27
BBS4-201ENST00000268057 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
BBS4-201ENST00000268057 CFTRP13569 1480 aa13.33□□□□□ -0.28
BBS4-201ENST00000268057 WIZO95785 1651 aa13.33□□□□□ -0.28
BBS4-201ENST00000268057 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
BBS4-201ENST00000268057 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
BBS4-201ENST00000268057 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
BBS4-201ENST00000268057 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
BBS4-201ENST00000268057 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
BBS4-201ENST00000268057 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
BBS4-201ENST00000268057 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
BBS4-201ENST00000268057 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
BBS4-201ENST00000268057 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
BBS4-201ENST00000268057 CYB5RLQ6IPT4 315 aa13.2□□□□□ -0.3
BBS4-201ENST00000268057 EEA1Q15075 1411 aa13.19□□□□□ -0.3
BBS4-201ENST00000268057 CHD1O14646 1710 aa13.16□□□□□ -0.3
BBS4-201ENST00000268057 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
BBS4-201ENST00000268057 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
BBS4-201ENST00000268057 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
BBS4-201ENST00000268057 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
BBS4-201ENST00000268057 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
BBS4-201ENST00000268057 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
BBS4-201ENST00000268057 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
BBS4-201ENST00000268057 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
BBS4-201ENST00000268057 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
BBS4-201ENST00000268057 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
BBS4-201ENST00000268057 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
BBS4-201ENST00000268057 CEP162Q5TB80 1403 aa13□□□□□ -0.33
BBS4-201ENST00000268057 MAGI1Q96QZ7 1491 aaPredicted RBP13□□□□□ -0.33
BBS4-201ENST00000268057 KIF21BO75037 1637 aa12.97□□□□□ -0.33
BBS4-201ENST00000268057 GOLGA3Q08378 1498 aa12.96□□□□□ -0.33
BBS4-201ENST00000268057 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
BBS4-201ENST00000268057 SOGA1O94964 1423 aa12.91□□□□□ -0.34
BBS4-201ENST00000268057 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
BBS4-201ENST00000268057 AQRO60306 1485 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■■■■ 31
BBS4-201ENST00000268057 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
BBS4-201ENST00000268057 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
BBS4-201ENST00000268057 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
BBS4-201ENST00000268057 SNAPC4Q5SXM2 1469 aa12.86□□□□□ -0.35
BBS4-201ENST00000268057 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
BBS4-201ENST00000268057 CCER1Q8TC90 406 aaPredicted RBP12.84□□□□□ -0.35
BBS4-201ENST00000268057 FBLN2P98095 1184 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms