RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
SYCP3-201ENST00000266743 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
SYCP3-201ENST00000266743 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
SYCP3-201ENST00000266743 ABCC9O60706 1549 aa23.64■■□□□ 1.38
SYCP3-201ENST00000266743 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
SYCP3-201ENST00000266743 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
SYCP3-201ENST00000266743 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
SYCP3-201ENST00000266743 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
SYCP3-201ENST00000266743 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
SYCP3-201ENST00000266743 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
SYCP3-201ENST00000266743 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
SYCP3-201ENST00000266743 NACADO15069 1562 aa21.76■■□□□ 1.07
SYCP3-201ENST00000266743 BICRAQ9NZM4 1560 aa21.53■■□□□ 1.04
SYCP3-201ENST00000266743 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
SYCP3-201ENST00000266743 FOXD1Q16676 465 aa21.33■■□□□ 1.01
SYCP3-201ENST00000266743 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
SYCP3-201ENST00000266743 DNAJC5Q9H3Z4 198 aa21.23■□□□□ 0.99
SYCP3-201ENST00000266743 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
SYCP3-201ENST00000266743 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
SYCP3-201ENST00000266743 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
SYCP3-201ENST00000266743 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
SYCP3-201ENST00000266743 SHROOM4Q9ULL8 1493 aa20.99■□□□□ 0.95
SYCP3-201ENST00000266743 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
SYCP3-201ENST00000266743 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
SYCP3-201ENST00000266743 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
SYCP3-201ENST00000266743 CUX2O14529 1486 aa20.45■□□□□ 0.86
SYCP3-201ENST00000266743 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
SYCP3-201ENST00000266743 ADRA2BP18089 450 aa20.32■□□□□ 0.84
SYCP3-201ENST00000266743 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
SYCP3-201ENST00000266743 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
SYCP3-201ENST00000266743 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
SYCP3-201ENST00000266743 NESP48681 1621 aa20.16■□□□□ 0.82
SYCP3-201ENST00000266743 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
SYCP3-201ENST00000266743 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
SYCP3-201ENST00000266743 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
SYCP3-201ENST00000266743 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
SYCP3-201ENST00000266743 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
SYCP3-201ENST00000266743 MSH5O43196 834 aa19.87■□□□□ 0.77
SYCP3-201ENST00000266743 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
SYCP3-201ENST00000266743 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
SYCP3-201ENST00000266743 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
SYCP3-201ENST00000266743 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
SYCP3-201ENST00000266743 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
SYCP3-201ENST00000266743 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
SYCP3-201ENST00000266743 MRC2Q9UBG0 1479 aa19.59■□□□□ 0.73
SYCP3-201ENST00000266743 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
SYCP3-201ENST00000266743 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
SYCP3-201ENST00000266743 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
SYCP3-201ENST00000266743 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
SYCP3-201ENST00000266743 WDR62O43379 1518 aa19.51■□□□□ 0.71
SYCP3-201ENST00000266743 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
SYCP3-201ENST00000266743 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
SYCP3-201ENST00000266743 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
SYCP3-201ENST00000266743 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
SYCP3-201ENST00000266743 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
SYCP3-201ENST00000266743 WIZO95785 1651 aa19.27■□□□□ 0.67
SYCP3-201ENST00000266743 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
SYCP3-201ENST00000266743 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
SYCP3-201ENST00000266743 CFTRP13569 1480 aa19.2■□□□□ 0.66
SYCP3-201ENST00000266743 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
SYCP3-201ENST00000266743 TRHP20396 242 aaPredicted RBP19.18■□□□□ 0.66
SYCP3-201ENST00000266743 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
SYCP3-201ENST00000266743 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
SYCP3-201ENST00000266743 ARAP1Q96P48 1450 aa19■□□□□ 0.63
SYCP3-201ENST00000266743 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
SYCP3-201ENST00000266743 FBLN2P98095 1184 aa18.96■□□□□ 0.63
SYCP3-201ENST00000266743 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
SYCP3-201ENST00000266743 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYCP3-201ENST00000266743 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
SYCP3-201ENST00000266743 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.62
SYCP3-201ENST00000266743 CHD1O14646 1710 aa18.83■□□□□ 0.6
SYCP3-201ENST00000266743 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
SYCP3-201ENST00000266743 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
SYCP3-201ENST00000266743 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
SYCP3-201ENST00000266743 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
SYCP3-201ENST00000266743 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
SYCP3-201ENST00000266743 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
SYCP3-201ENST00000266743 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
SYCP3-201ENST00000266743 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
SYCP3-201ENST00000266743 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
SYCP3-201ENST00000266743 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
SYCP3-201ENST00000266743 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
SYCP3-201ENST00000266743 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.57
SYCP3-201ENST00000266743 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
SYCP3-201ENST00000266743 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
SYCP3-201ENST00000266743 SOGA1O94964 1423 aa18.62■□□□□ 0.57
SYCP3-201ENST00000266743 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
SYCP3-201ENST00000266743 SYNJ1O43426 1573 aa18.53■□□□□ 0.56
SYCP3-201ENST00000266743 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
SYCP3-201ENST00000266743 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
SYCP3-201ENST00000266743 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
SYCP3-201ENST00000266743 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
SYCP3-201ENST00000266743 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
SYCP3-201ENST00000266743 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
SYCP3-201ENST00000266743 CUX1P39880 1505 aa18.41■□□□□ 0.54
SYCP3-201ENST00000266743 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
SYCP3-201ENST00000266743 ILDR1Q86SU0 546 aaPredicted RBP18.3■□□□□ 0.52
SYCP3-201ENST00000266743 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
SYCP3-201ENST00000266743 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
SYCP3-201ENST00000266743 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms