RNA–Protein interactions for RNA: ENST00000265421.8

POLB-201, Transcript of DNA polymerase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLB, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-201ENST00000265421 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
POLB-201ENST00000265421 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
POLB-201ENST00000265421 ABCC9O60706 1549 aa23.68■■□□□ 1.38
POLB-201ENST00000265421 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
POLB-201ENST00000265421 RB1CC1Q8TDY2 1594 aa22.68■■□□□ 1.22
POLB-201ENST00000265421 NACADO15069 1562 aa22.67■■□□□ 1.22
POLB-201ENST00000265421 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
POLB-201ENST00000265421 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
POLB-201ENST00000265421 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
POLB-201ENST00000265421 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
POLB-201ENST00000265421 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
POLB-201ENST00000265421 BICRAQ9NZM4 1560 aa21.98■■□□□ 1.11
POLB-201ENST00000265421 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
POLB-201ENST00000265421 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
POLB-201ENST00000265421 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
POLB-201ENST00000265421 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
POLB-201ENST00000265421 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
POLB-201ENST00000265421 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
POLB-201ENST00000265421 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
POLB-201ENST00000265421 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
POLB-201ENST00000265421 ATAD2BQ9ULI0 1458 aa20.96■□□□□ 0.95
POLB-201ENST00000265421 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
POLB-201ENST00000265421 SMARCA4P51532 1647 aa20.88■□□□□ 0.93
POLB-201ENST00000265421 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
POLB-201ENST00000265421 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
POLB-201ENST00000265421 HMGXB3Q12766 1538 aa20.77■□□□□ 0.92
POLB-201ENST00000265421 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
POLB-201ENST00000265421 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
POLB-201ENST00000265421 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
POLB-201ENST00000265421 NESP48681 1621 aa20.43■□□□□ 0.86
POLB-201ENST00000265421 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
POLB-201ENST00000265421 WIZO95785 1651 aa20.42■□□□□ 0.86
POLB-201ENST00000265421 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
POLB-201ENST00000265421 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
POLB-201ENST00000265421 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
POLB-201ENST00000265421 CUX2O14529 1486 aa20.32■□□□□ 0.84
POLB-201ENST00000265421 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
POLB-201ENST00000265421 CFTRP13569 1480 aa20.21■□□□□ 0.83
POLB-201ENST00000265421 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
POLB-201ENST00000265421 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
POLB-201ENST00000265421 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.8
POLB-201ENST00000265421 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
POLB-201ENST00000265421 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
POLB-201ENST00000265421 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
POLB-201ENST00000265421 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
POLB-201ENST00000265421 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
POLB-201ENST00000265421 WDR62O43379 1518 aa19.97■□□□□ 0.79
POLB-201ENST00000265421 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
POLB-201ENST00000265421 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
POLB-201ENST00000265421 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
POLB-201ENST00000265421 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
POLB-201ENST00000265421 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
POLB-201ENST00000265421 PRDM2Q13029 1718 aa19.64■□□□□ 0.74
POLB-201ENST00000265421 DNMBPQ6XZF7 1577 aa19.63■□□□□ 0.73
POLB-201ENST00000265421 OSCARQ8IYS5 282 aa19.58■□□□□ 0.73
POLB-201ENST00000265421 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
POLB-201ENST00000265421 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
POLB-201ENST00000265421 SOGA1O94964 1423 aa19.54■□□□□ 0.72
POLB-201ENST00000265421 CUX1P39880 1505 aa19.49■□□□□ 0.71
POLB-201ENST00000265421 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
POLB-201ENST00000265421 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
POLB-201ENST00000265421 FGD5Q6ZNL6 1462 aa19.46■□□□□ 0.71
POLB-201ENST00000265421 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
POLB-201ENST00000265421 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
POLB-201ENST00000265421 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
POLB-201ENST00000265421 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
POLB-201ENST00000265421 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
POLB-201ENST00000265421 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
POLB-201ENST00000265421 FBLN2P98095 1184 aa19.3■□□□□ 0.68
POLB-201ENST00000265421 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
POLB-201ENST00000265421 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
POLB-201ENST00000265421 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
POLB-201ENST00000265421 MAGI1Q96QZ7 1491 aaPredicted RBP19.25■□□□□ 0.67
POLB-201ENST00000265421 TOP2BQ02880 1626 aa19.24■□□□□ 0.67
POLB-201ENST00000265421 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
POLB-201ENST00000265421 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
POLB-201ENST00000265421 SYNJ2O15056 1496 aa19.18■□□□□ 0.66
POLB-201ENST00000265421 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
POLB-201ENST00000265421 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
POLB-201ENST00000265421 ABCA5Q8WWZ7 1642 aa19.12■□□□□ 0.65
POLB-201ENST00000265421 ARHGEF11O15085 1522 aa19.08■□□□□ 0.65
POLB-201ENST00000265421 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
POLB-201ENST00000265421 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
POLB-201ENST00000265421 CYB5RLQ6IPT4 315 aa19.04■□□□□ 0.64
POLB-201ENST00000265421 IGF1RP08069 1367 aa19.02■□□□□ 0.64
POLB-201ENST00000265421 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.64
POLB-201ENST00000265421 CHD1O14646 1710 aa19.02■□□□□ 0.64
POLB-201ENST00000265421 RIMBP3CA6NJZ7 1639 aa19.01■□□□□ 0.63
POLB-201ENST00000265421 RIMBP3BA6NNM3 1639 aa19.01■□□□□ 0.63
POLB-201ENST00000265421 RIMBP3Q9UFD9 1639 aa19.01■□□□□ 0.63
POLB-201ENST00000265421 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
POLB-201ENST00000265421 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
POLB-201ENST00000265421 NUP160Q12769 1436 aa18.99■□□□□ 0.63
POLB-201ENST00000265421 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
POLB-201ENST00000265421 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
POLB-201ENST00000265421 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
POLB-201ENST00000265421 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
POLB-201ENST00000265421 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
POLB-201ENST00000265421 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
POLB-201ENST00000265421 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms