RNA–Protein interactions for RNA: ENST00000265295.8

SPDL1-201, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDL1, Length 2,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-201ENST00000265295 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
SPDL1-201ENST00000265295 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
SPDL1-201ENST00000265295 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
SPDL1-201ENST00000265295 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
SPDL1-201ENST00000265295 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
SPDL1-201ENST00000265295 NACADO15069 1562 aa21.22■□□□□ 0.99
SPDL1-201ENST00000265295 RB1CC1Q8TDY2 1594 aa20.92■□□□□ 0.94
SPDL1-201ENST00000265295 ABCC9O60706 1549 aa20.9■□□□□ 0.94
SPDL1-201ENST00000265295 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
SPDL1-201ENST00000265295 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
SPDL1-201ENST00000265295 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
SPDL1-201ENST00000265295 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
SPDL1-201ENST00000265295 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
SPDL1-201ENST00000265295 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
SPDL1-201ENST00000265295 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
SPDL1-201ENST00000265295 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
SPDL1-201ENST00000265295 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
SPDL1-201ENST00000265295 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
SPDL1-201ENST00000265295 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
SPDL1-201ENST00000265295 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
SPDL1-201ENST00000265295 WIZO95785 1651 aa19.83■□□□□ 0.77
SPDL1-201ENST00000265295 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
SPDL1-201ENST00000265295 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
SPDL1-201ENST00000265295 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.72
SPDL1-201ENST00000265295 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
SPDL1-201ENST00000265295 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
SPDL1-201ENST00000265295 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
SPDL1-201ENST00000265295 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
SPDL1-201ENST00000265295 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
SPDL1-201ENST00000265295 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
SPDL1-201ENST00000265295 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
SPDL1-201ENST00000265295 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
SPDL1-201ENST00000265295 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
SPDL1-201ENST00000265295 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
SPDL1-201ENST00000265295 CFTRP13569 1480 aa19.04■□□□□ 0.64
SPDL1-201ENST00000265295 EEA1Q15075 1411 aa19.04■□□□□ 0.64
SPDL1-201ENST00000265295 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
SPDL1-201ENST00000265295 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
SPDL1-201ENST00000265295 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
SPDL1-201ENST00000265295 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
SPDL1-201ENST00000265295 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
SPDL1-201ENST00000265295 CADPSQ9ULU8 1353 aa18.87■□□□□ 0.61
SPDL1-201ENST00000265295 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
SPDL1-201ENST00000265295 KIF21BO75037 1637 aa18.74■□□□□ 0.59
SPDL1-201ENST00000265295 CUX1P39880 1505 aa18.71■□□□□ 0.59
SPDL1-201ENST00000265295 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.58
SPDL1-201ENST00000265295 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
SPDL1-201ENST00000265295 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
SPDL1-201ENST00000265295 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
SPDL1-201ENST00000265295 SOGA1O94964 1423 aa18.6■□□□□ 0.57
SPDL1-201ENST00000265295 GOLGA3Q08378 1498 aa18.59■□□□□ 0.57
SPDL1-201ENST00000265295 TNIKQ9UKE5 1360 aa18.58■□□□□ 0.56
SPDL1-201ENST00000265295 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
SPDL1-201ENST00000265295 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
SPDL1-201ENST00000265295 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
SPDL1-201ENST00000265295 KIF27Q86VH2 1401 aa18.52■□□□□ 0.55
SPDL1-201ENST00000265295 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
SPDL1-201ENST00000265295 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
SPDL1-201ENST00000265295 TOPBP1Q92547 1522 aa18.48■□□□□ 0.55
SPDL1-201ENST00000265295 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
SPDL1-201ENST00000265295 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
SPDL1-201ENST00000265295 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
SPDL1-201ENST00000265295 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
SPDL1-201ENST00000265295 NESP48681 1621 aa18.41■□□□□ 0.54
SPDL1-201ENST00000265295 CUL7Q14999 1698 aa18.39■□□□□ 0.53
SPDL1-201ENST00000265295 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
SPDL1-201ENST00000265295 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
SPDL1-201ENST00000265295 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
SPDL1-201ENST00000265295 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
SPDL1-201ENST00000265295 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
SPDL1-201ENST00000265295 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
SPDL1-201ENST00000265295 CUX2O14529 1486 aa18.31■□□□□ 0.52
SPDL1-201ENST00000265295 WDR62O43379 1518 aa18.3■□□□□ 0.52
SPDL1-201ENST00000265295 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
SPDL1-201ENST00000265295 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
SPDL1-201ENST00000265295 IGF1RP08069 1367 aa18.26■□□□□ 0.51
SPDL1-201ENST00000265295 CLIP1P30622 1438 aa18.18■□□□□ 0.5
SPDL1-201ENST00000265295 IFT140Q96RY7 1462 aa18.17■□□□□ 0.5
SPDL1-201ENST00000265295 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
SPDL1-201ENST00000265295 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
SPDL1-201ENST00000265295 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
SPDL1-201ENST00000265295 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
SPDL1-201ENST00000265295 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
SPDL1-201ENST00000265295 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
SPDL1-201ENST00000265295 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.49
SPDL1-201ENST00000265295 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
SPDL1-201ENST00000265295 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
SPDL1-201ENST00000265295 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
SPDL1-201ENST00000265295 EFCAB5A4FU69 1503 aa18.11■□□□□ 0.49
SPDL1-201ENST00000265295 MAP3K1Q13233 1512 aa18.07■□□□□ 0.48
SPDL1-201ENST00000265295 ADAMTS12P58397 1594 aa18.03■□□□□ 0.48
SPDL1-201ENST00000265295 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
SPDL1-201ENST00000265295 GRIN2BQ13224 1484 aa18.02■□□□□ 0.47
SPDL1-201ENST00000265295 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
SPDL1-201ENST00000265295 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
SPDL1-201ENST00000265295 ARHGAP35Q9NRY4 1499 aa17.98■□□□□ 0.47
SPDL1-201ENST00000265295 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.47
SPDL1-201ENST00000265295 SAMD9Q5K651 1589 aa17.96■□□□□ 0.47
SPDL1-201ENST00000265295 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
SPDL1-201ENST00000265295 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms