RNA–Protein interactions for RNA: ENST00000262929.9

SIRPB1-201, Transcript of signal regulatory protein beta 1, humanhuman

TSL 5 BASIC

Gene SIRPB1, Length 1,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-201ENST00000262929 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
SIRPB1-201ENST00000262929 ABCC9O60706 1549 aa20.89■□□□□ 0.94
SIRPB1-201ENST00000262929 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
SIRPB1-201ENST00000262929 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
SIRPB1-201ENST00000262929 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
SIRPB1-201ENST00000262929 NACADO15069 1562 aa19.61■□□□□ 0.73
SIRPB1-201ENST00000262929 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
SIRPB1-201ENST00000262929 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
SIRPB1-201ENST00000262929 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
SIRPB1-201ENST00000262929 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
SIRPB1-201ENST00000262929 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
SIRPB1-201ENST00000262929 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
SIRPB1-201ENST00000262929 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
SIRPB1-201ENST00000262929 SHROOM4Q9ULL8 1493 aa18.98■□□□□ 0.63
SIRPB1-201ENST00000262929 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
SIRPB1-201ENST00000262929 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
SIRPB1-201ENST00000262929 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
SIRPB1-201ENST00000262929 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
SIRPB1-201ENST00000262929 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
SIRPB1-201ENST00000262929 CUX2O14529 1486 aa18.13■□□□□ 0.49
SIRPB1-201ENST00000262929 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
SIRPB1-201ENST00000262929 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
SIRPB1-201ENST00000262929 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
SIRPB1-201ENST00000262929 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.47
SIRPB1-201ENST00000262929 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
SIRPB1-201ENST00000262929 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
SIRPB1-201ENST00000262929 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
SIRPB1-201ENST00000262929 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
SIRPB1-201ENST00000262929 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
SIRPB1-201ENST00000262929 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
SIRPB1-201ENST00000262929 NESP48681 1621 aa17.89■□□□□ 0.45
SIRPB1-201ENST00000262929 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
SIRPB1-201ENST00000262929 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
SIRPB1-201ENST00000262929 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
SIRPB1-201ENST00000262929 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
SIRPB1-201ENST00000262929 WIZO95785 1651 aa17.74■□□□□ 0.43
SIRPB1-201ENST00000262929 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
SIRPB1-201ENST00000262929 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
SIRPB1-201ENST00000262929 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.41
SIRPB1-201ENST00000262929 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
SIRPB1-201ENST00000262929 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
SIRPB1-201ENST00000262929 WDR62O43379 1518 aa17.48■□□□□ 0.39
SIRPB1-201ENST00000262929 AEBP2Q6ZN18 517 aaPredicted RBP17.46■□□□□ 0.39
SIRPB1-201ENST00000262929 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
SIRPB1-201ENST00000262929 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
SIRPB1-201ENST00000262929 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
SIRPB1-201ENST00000262929 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
SIRPB1-201ENST00000262929 CFTRP13569 1480 aa17.3■□□□□ 0.36
SIRPB1-201ENST00000262929 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
SIRPB1-201ENST00000262929 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
SIRPB1-201ENST00000262929 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
SIRPB1-201ENST00000262929 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
SIRPB1-201ENST00000262929 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
SIRPB1-201ENST00000262929 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
SIRPB1-201ENST00000262929 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
SIRPB1-201ENST00000262929 IFT140Q96RY7 1462 aa17.04■□□□□ 0.32
SIRPB1-201ENST00000262929 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
SIRPB1-201ENST00000262929 ARHGEF11O15085 1522 aa16.99■□□□□ 0.31
SIRPB1-201ENST00000262929 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
SIRPB1-201ENST00000262929 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
SIRPB1-201ENST00000262929 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
SIRPB1-201ENST00000262929 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
SIRPB1-201ENST00000262929 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
SIRPB1-201ENST00000262929 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
SIRPB1-201ENST00000262929 CHD1O14646 1710 aa16.87■□□□□ 0.29
SIRPB1-201ENST00000262929 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
SIRPB1-201ENST00000262929 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
SIRPB1-201ENST00000262929 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
SIRPB1-201ENST00000262929 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
SIRPB1-201ENST00000262929 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
SIRPB1-201ENST00000262929 CUX1P39880 1505 aa16.77■□□□□ 0.28
SIRPB1-201ENST00000262929 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
SIRPB1-201ENST00000262929 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
SIRPB1-201ENST00000262929 FBLN2P98095 1184 aa16.73■□□□□ 0.27
SIRPB1-201ENST00000262929 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
SIRPB1-201ENST00000262929 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
SIRPB1-201ENST00000262929 SOGA1O94964 1423 aa16.69■□□□□ 0.26
SIRPB1-201ENST00000262929 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
SIRPB1-201ENST00000262929 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
SIRPB1-201ENST00000262929 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
SIRPB1-201ENST00000262929 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
SIRPB1-201ENST00000262929 FAM9AQ8IZU1 332 aaPredicted RBP16.66■□□□□ 0.26
SIRPB1-201ENST00000262929 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
SIRPB1-201ENST00000262929 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
SIRPB1-201ENST00000262929 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
SIRPB1-201ENST00000262929 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
SIRPB1-201ENST00000262929 EEA1Q15075 1411 aa16.58■□□□□ 0.25
SIRPB1-201ENST00000262929 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
SIRPB1-201ENST00000262929 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
SIRPB1-201ENST00000262929 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
SIRPB1-201ENST00000262929 KIF27Q86VH2 1401 aa16.52■□□□□ 0.24
SIRPB1-201ENST00000262929 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
SIRPB1-201ENST00000262929 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
SIRPB1-201ENST00000262929 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
SIRPB1-201ENST00000262929 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
SIRPB1-201ENST00000262929 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
SIRPB1-201ENST00000262929 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
SIRPB1-201ENST00000262929 ERCC6L2Q5T890 1561 aa16.39■□□□□ 0.21
SIRPB1-201ENST00000262929 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
SIRPB1-201ENST00000262929 IGF1RP08069 1367 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms