RNA–Protein interactions for RNA: ENST00000261464.9

TRAF5-201, Transcript of TNF receptor associated factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF5, Length 3,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-201ENST00000261464 NISCHQ9Y2I1 1504 aa14.63□□□□□ -0.07
TRAF5-201ENST00000261464 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
TRAF5-201ENST00000261464 ZCCHC6Q5VYS8 1495 aaKnown RBP12.37□□□□□ -0.43
TRAF5-201ENST00000261464 DCAF1Q9Y4B6 1507 aa12.36□□□□□ -0.43
TRAF5-201ENST00000261464 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
TRAF5-201ENST00000261464 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
TRAF5-201ENST00000261464 NACADO15069 1562 aa12□□□□□ -0.49
TRAF5-201ENST00000261464 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
TRAF5-201ENST00000261464 RB1CC1Q8TDY2 1594 aa11.83□□□□□ -0.52
TRAF5-201ENST00000261464 ABCC9O60706 1549 aa11.8□□□□□ -0.52
TRAF5-201ENST00000261464 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
TRAF5-201ENST00000261464 SHROOM4Q9ULL8 1493 aa11.61□□□□□ -0.55
TRAF5-201ENST00000261464 SCRIBQ14160 1630 aa11.61□□□□□ -0.55
TRAF5-201ENST00000261464 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
TRAF5-201ENST00000261464 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
TRAF5-201ENST00000261464 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
TRAF5-201ENST00000261464 BAZ1AQ9NRL2 1556 aaPredicted RBP11.26□□□□□ -0.61
TRAF5-201ENST00000261464 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
TRAF5-201ENST00000261464 MROH2BQ7Z745 1585 aa11.25□□□□□ -0.61
TRAF5-201ENST00000261464 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
TRAF5-201ENST00000261464 WIZO95785 1651 aa11.21□□□□□ -0.62
TRAF5-201ENST00000261464 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
TRAF5-201ENST00000261464 HMGXB3Q12766 1538 aa11.13□□□□□ -0.63
TRAF5-201ENST00000261464 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
TRAF5-201ENST00000261464 TOP2AP11388 1531 aaKnown RBP11.11□□□□□ -0.63
TRAF5-201ENST00000261464 PRDM2Q13029 1718 aa11.11□□□□□ -0.63
TRAF5-201ENST00000261464 ATAD2BQ9ULI0 1458 aa11.03□□□□□ -0.64
TRAF5-201ENST00000261464 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.65
TRAF5-201ENST00000261464 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
TRAF5-201ENST00000261464 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAF5-201ENST00000261464 CCDC88BA6NC98 1476 aa10.85□□□□□ -0.67
TRAF5-201ENST00000261464 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
TRAF5-201ENST00000261464 BAZ1BQ9UIG0 1483 aaKnown RBP10.8□□□□□ -0.68
TRAF5-201ENST00000261464 BIVM-ERCC5R4GMW8 1640 aa10.77□□□□□ -0.68
TRAF5-201ENST00000261464 CFTRP13569 1480 aa10.73□□□□□ -0.69
TRAF5-201ENST00000261464 LAMC3Q9Y6N6 1575 aa10.71□□□□□ -0.7
TRAF5-201ENST00000261464 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
TRAF5-201ENST00000261464 KIF21AQ7Z4S6 1674 aa10.67□□□□□ -0.7
TRAF5-201ENST00000261464 TOP2BQ02880 1626 aa10.65□□□□□ -0.71
TRAF5-201ENST00000261464 FAM9AQ8IZU1 332 aaPredicted RBP10.63□□□□□ -0.71
TRAF5-201ENST00000261464 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
TRAF5-201ENST00000261464 THOC2Q8NI27 1593 aaKnown RBP10.6□□□□□ -0.71
TRAF5-201ENST00000261464 CUX1P39880 1505 aa10.56□□□□□ -0.72
TRAF5-201ENST00000261464 DNAJC5BQ9UF47 199 aa10.55□□□□□ -0.72
TRAF5-201ENST00000261464 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
TRAF5-201ENST00000261464 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
TRAF5-201ENST00000261464 TARBP1Q13395 1621 aaKnown RBP10.51□□□□□ -0.73
TRAF5-201ENST00000261464 DNMBPQ6XZF7 1577 aa10.51□□□□□ -0.73
TRAF5-201ENST00000261464 WDR62O43379 1518 aa10.51□□□□□ -0.73
TRAF5-201ENST00000261464 NESP48681 1621 aa10.49□□□□□ -0.73
TRAF5-201ENST00000261464 ABCA5Q8WWZ7 1642 aa10.47□□□□□ -0.73
TRAF5-201ENST00000261464 URB2Q14146 1524 aaKnown RBP10.46□□□□□ -0.74
TRAF5-201ENST00000261464 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
TRAF5-201ENST00000261464 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
TRAF5-201ENST00000261464 TOPBP1Q92547 1522 aa10.4□□□□□ -0.74
TRAF5-201ENST00000261464 PBRM1Q86U86 1689 aa10.39□□□□□ -0.75
TRAF5-201ENST00000261464 TTBK1Q5TCY1 1321 aaPredicted RBP10.38□□□□□ -0.75
TRAF5-201ENST00000261464 KIF21BO75037 1637 aa10.38□□□□□ -0.75
TRAF5-201ENST00000261464 CHIC1Q5VXU3 224 aa10.38□□□□□ -0.75
TRAF5-201ENST00000261464 PCGF6Q9BYE7 350 aa10.38□□□□□ -0.75
TRAF5-201ENST00000261464 WRNQ14191 1432 aaPredicted RBP eCLIP10.37□□□□□ -0.75
TRAF5-201ENST00000261464 ABCA10Q8WWZ4 1543 aa10.35□□□□□ -0.75
TRAF5-201ENST00000261464 CUX2O14529 1486 aa10.35□□□□□ -0.75
TRAF5-201ENST00000261464 CEP164Q9UPV0 1460 aa10.34□□□□□ -0.75
TRAF5-201ENST00000261464 RANGAP1P46060 587 aaPredicted RBP10.34□□□□□ -0.75
TRAF5-201ENST00000261464 MRC2Q9UBG0 1479 aa10.33□□□□□ -0.76
TRAF5-201ENST00000261464 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
TRAF5-201ENST00000261464 FGD5Q6ZNL6 1462 aa10.3□□□□□ -0.76
TRAF5-201ENST00000261464 CUL7Q14999 1698 aa10.3□□□□□ -0.76
TRAF5-201ENST00000261464 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
TRAF5-201ENST00000261464 LOC105371045A0A1W2PR82 267 aa10.29□□□□□ -0.76
TRAF5-201ENST00000261464 ERICH3Q5RHP9 1530 aa10.28□□□□□ -0.76
TRAF5-201ENST00000261464 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
TRAF5-201ENST00000261464 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
TRAF5-201ENST00000261464 PRXQ9BXM0 1461 aa10.26□□□□□ -0.77
TRAF5-201ENST00000261464 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
TRAF5-201ENST00000261464 EEA1Q15075 1411 aa10.24□□□□□ -0.77
TRAF5-201ENST00000261464 ADAMTS12P58397 1594 aa10.23□□□□□ -0.77
TRAF5-201ENST00000261464 SOGA1O94964 1423 aa10.22□□□□□ -0.77
TRAF5-201ENST00000261464 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
TRAF5-201ENST00000261464 UBTFP17480 764 aaKnown RBP10.21□□□□□ -0.78
TRAF5-201ENST00000261464 APLP2Q06481 763 aa10.21□□□□□ -0.78
TRAF5-201ENST00000261464 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
TRAF5-201ENST00000261464 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
TRAF5-201ENST00000261464 SAMD9Q5K651 1589 aa10.15□□□□□ -0.78
TRAF5-201ENST00000261464 SHROOM2Q13796 1616 aa10.14□□□□□ -0.79
TRAF5-201ENST00000261464 LRRIQ1Q96JM4 1722 aa10.14□□□□□ -0.79
TRAF5-201ENST00000261464 CHD1O14646 1710 aa10.11□□□□□ -0.79
TRAF5-201ENST00000261464 ZNF608Q9ULD9 1512 aaPredicted RBP10.1□□□□□ -0.79
TRAF5-201ENST00000261464 IGF1RP08069 1367 aa10.09□□□□□ -0.79
TRAF5-201ENST00000261464 ATP1B4Q9UN42 357 aaPredicted RBP10.08□□□□□ -0.8
TRAF5-201ENST00000261464 RAPGEF2Q9Y4G8 1499 aa10.07□□□□□ -0.8
TRAF5-201ENST00000261464 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
TRAF5-201ENST00000261464 KIF27Q86VH2 1401 aa10.06□□□□□ -0.8
TRAF5-201ENST00000261464 CLASP1Q7Z460 1538 aa10.05□□□□□ -0.8
TRAF5-201ENST00000261464 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
TRAF5-201ENST00000261464 MAGI1Q96QZ7 1491 aaPredicted RBP10.05□□□□□ -0.8
TRAF5-201ENST00000261464 GOLGA3Q08378 1498 aa10.03□□□□□ -0.8
TRAF5-201ENST00000261464 GRIN2BQ13224 1484 aa10.02□□□□□ -0.8
TRAF5-201ENST00000261464 UGGT2Q9NYU1 1516 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms