RNA–Protein interactions for RNA: ENST00000260276.7

C11orf1-201, Transcript of chromosome 11 open reading frame 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf1, Length 2,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1-201ENST00000260276 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
C11orf1-201ENST00000260276 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
C11orf1-201ENST00000260276 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
C11orf1-201ENST00000260276 ABCC9O60706 1549 aa24.29■■□□□ 1.48
C11orf1-201ENST00000260276 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
C11orf1-201ENST00000260276 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
C11orf1-201ENST00000260276 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
C11orf1-201ENST00000260276 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
C11orf1-201ENST00000260276 NACADO15069 1562 aa23.73■■□□□ 1.39
C11orf1-201ENST00000260276 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
C11orf1-201ENST00000260276 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
C11orf1-201ENST00000260276 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
C11orf1-201ENST00000260276 BICRAQ9NZM4 1560 aa22.97■■□□□ 1.27
C11orf1-201ENST00000260276 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
C11orf1-201ENST00000260276 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
C11orf1-201ENST00000260276 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
C11orf1-201ENST00000260276 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.21
C11orf1-201ENST00000260276 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.2
C11orf1-201ENST00000260276 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
C11orf1-201ENST00000260276 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
C11orf1-201ENST00000260276 WIZO95785 1651 aa22.43■■□□□ 1.18
C11orf1-201ENST00000260276 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
C11orf1-201ENST00000260276 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
C11orf1-201ENST00000260276 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
C11orf1-201ENST00000260276 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
C11orf1-201ENST00000260276 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
C11orf1-201ENST00000260276 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
C11orf1-201ENST00000260276 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
C11orf1-201ENST00000260276 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
C11orf1-201ENST00000260276 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
C11orf1-201ENST00000260276 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
C11orf1-201ENST00000260276 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
C11orf1-201ENST00000260276 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
C11orf1-201ENST00000260276 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
C11orf1-201ENST00000260276 CFTRP13569 1480 aa21.4■■□□□ 1.02
C11orf1-201ENST00000260276 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
C11orf1-201ENST00000260276 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
C11orf1-201ENST00000260276 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
C11orf1-201ENST00000260276 NESP48681 1621 aa21.32■■□□□ 1
C11orf1-201ENST00000260276 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
C11orf1-201ENST00000260276 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
C11orf1-201ENST00000260276 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
C11orf1-201ENST00000260276 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.97
C11orf1-201ENST00000260276 CUX1P39880 1505 aa21.12■□□□□ 0.97
C11orf1-201ENST00000260276 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
C11orf1-201ENST00000260276 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
C11orf1-201ENST00000260276 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.96
C11orf1-201ENST00000260276 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
C11orf1-201ENST00000260276 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
C11orf1-201ENST00000260276 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
C11orf1-201ENST00000260276 SOGA1O94964 1423 aa20.99■□□□□ 0.95
C11orf1-201ENST00000260276 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
C11orf1-201ENST00000260276 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
C11orf1-201ENST00000260276 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
C11orf1-201ENST00000260276 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
C11orf1-201ENST00000260276 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
C11orf1-201ENST00000260276 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
C11orf1-201ENST00000260276 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
C11orf1-201ENST00000260276 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
C11orf1-201ENST00000260276 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
C11orf1-201ENST00000260276 MRC2Q9UBG0 1479 aa20.79■□□□□ 0.92
C11orf1-201ENST00000260276 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
C11orf1-201ENST00000260276 EEA1Q15075 1411 aa20.77■□□□□ 0.92
C11orf1-201ENST00000260276 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
C11orf1-201ENST00000260276 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
C11orf1-201ENST00000260276 CUX2O14529 1486 aa20.71■□□□□ 0.91
C11orf1-201ENST00000260276 WDR62O43379 1518 aa20.71■□□□□ 0.91
C11orf1-201ENST00000260276 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
C11orf1-201ENST00000260276 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
C11orf1-201ENST00000260276 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
C11orf1-201ENST00000260276 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
C11orf1-201ENST00000260276 KIF21BO75037 1637 aa20.61■□□□□ 0.89
C11orf1-201ENST00000260276 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
C11orf1-201ENST00000260276 RAPGEF2Q9Y4G8 1499 aa20.56■□□□□ 0.88
C11orf1-201ENST00000260276 GOLGA3Q08378 1498 aa20.55■□□□□ 0.88
C11orf1-201ENST00000260276 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
C11orf1-201ENST00000260276 IGF1RP08069 1367 aa20.54■□□□□ 0.88
C11orf1-201ENST00000260276 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
C11orf1-201ENST00000260276 IFT140Q96RY7 1462 aa20.49■□□□□ 0.87
C11orf1-201ENST00000260276 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
C11orf1-201ENST00000260276 GAPVD1Q14C86 1478 aa20.47■□□□□ 0.87
C11orf1-201ENST00000260276 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
C11orf1-201ENST00000260276 UBTFP17480 764 aaKnown RBP20.46■□□□□ 0.87
C11orf1-201ENST00000260276 PBRM1Q86U86 1689 aa20.46■□□□□ 0.87
C11orf1-201ENST00000260276 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.87
C11orf1-201ENST00000260276 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
C11orf1-201ENST00000260276 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
C11orf1-201ENST00000260276 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
C11orf1-201ENST00000260276 CUL7Q14999 1698 aa20.4■□□□□ 0.86
C11orf1-201ENST00000260276 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
C11orf1-201ENST00000260276 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
C11orf1-201ENST00000260276 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
C11orf1-201ENST00000260276 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
C11orf1-201ENST00000260276 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
C11orf1-201ENST00000260276 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
C11orf1-201ENST00000260276 CLIP1P30622 1438 aa20.22■□□□□ 0.83
C11orf1-201ENST00000260276 CTTNBP2Q8WZ74 1663 aa20.22■□□□□ 0.83
C11orf1-201ENST00000260276 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
C11orf1-201ENST00000260276 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
C11orf1-201ENST00000260276 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms