RNA–Protein interactions for RNA: ENST00000246554.7

COX6B1-201, Transcript of cytochrome c oxidase subunit 6B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6B1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6B1-201ENST00000246554 NISCHQ9Y2I1 1504 aa29.46■■■□□ 2.31
COX6B1-201ENST00000246554 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
COX6B1-201ENST00000246554 ABCC9O60706 1549 aa25.78■■□□□ 1.72
COX6B1-201ENST00000246554 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
COX6B1-201ENST00000246554 NACADO15069 1562 aa24.82■■□□□ 1.56
COX6B1-201ENST00000246554 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
COX6B1-201ENST00000246554 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
COX6B1-201ENST00000246554 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
COX6B1-201ENST00000246554 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
COX6B1-201ENST00000246554 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
COX6B1-201ENST00000246554 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
COX6B1-201ENST00000246554 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
COX6B1-201ENST00000246554 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
COX6B1-201ENST00000246554 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
COX6B1-201ENST00000246554 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
COX6B1-201ENST00000246554 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
COX6B1-201ENST00000246554 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
COX6B1-201ENST00000246554 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
COX6B1-201ENST00000246554 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.26
COX6B1-201ENST00000246554 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
COX6B1-201ENST00000246554 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
COX6B1-201ENST00000246554 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
COX6B1-201ENST00000246554 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
COX6B1-201ENST00000246554 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
COX6B1-201ENST00000246554 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
COX6B1-201ENST00000246554 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
COX6B1-201ENST00000246554 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
COX6B1-201ENST00000246554 WIZO95785 1651 aa22.37■■□□□ 1.17
COX6B1-201ENST00000246554 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
COX6B1-201ENST00000246554 ERCC6Q03468 1493 aa22.33■■□□□ 1.16
COX6B1-201ENST00000246554 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
COX6B1-201ENST00000246554 NESP48681 1621 aa22.22■■□□□ 1.15
COX6B1-201ENST00000246554 CUX2O14529 1486 aa22.21■■□□□ 1.15
COX6B1-201ENST00000246554 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
COX6B1-201ENST00000246554 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
COX6B1-201ENST00000246554 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
COX6B1-201ENST00000246554 CFTRP13569 1480 aa22.01■■□□□ 1.11
COX6B1-201ENST00000246554 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
COX6B1-201ENST00000246554 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
COX6B1-201ENST00000246554 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
COX6B1-201ENST00000246554 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
COX6B1-201ENST00000246554 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
COX6B1-201ENST00000246554 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
COX6B1-201ENST00000246554 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
COX6B1-201ENST00000246554 WDR62O43379 1518 aa21.83■■□□□ 1.09
COX6B1-201ENST00000246554 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
COX6B1-201ENST00000246554 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
COX6B1-201ENST00000246554 URB2Q14146 1524 aaKnown RBP21.63■■□□□ 1.05
COX6B1-201ENST00000246554 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
COX6B1-201ENST00000246554 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
COX6B1-201ENST00000246554 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
COX6B1-201ENST00000246554 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
COX6B1-201ENST00000246554 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
COX6B1-201ENST00000246554 TARBP1Q13395 1621 aaKnown RBP21.28■■□□□ 1
COX6B1-201ENST00000246554 OSCARQ8IYS5 282 aa21.27■■□□□ 1
COX6B1-201ENST00000246554 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
COX6B1-201ENST00000246554 SOGA1O94964 1423 aa21.27■■□□□ 1
COX6B1-201ENST00000246554 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
COX6B1-201ENST00000246554 CUX1P39880 1505 aa21.24■□□□□ 0.99
COX6B1-201ENST00000246554 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
COX6B1-201ENST00000246554 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
COX6B1-201ENST00000246554 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.98
COX6B1-201ENST00000246554 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
COX6B1-201ENST00000246554 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
COX6B1-201ENST00000246554 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
COX6B1-201ENST00000246554 TOP2BQ02880 1626 aa21.09■□□□□ 0.97
COX6B1-201ENST00000246554 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
COX6B1-201ENST00000246554 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
COX6B1-201ENST00000246554 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
COX6B1-201ENST00000246554 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
COX6B1-201ENST00000246554 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
COX6B1-201ENST00000246554 CHD1O14646 1710 aa20.99■□□□□ 0.95
COX6B1-201ENST00000246554 FBLN2P98095 1184 aa20.99■□□□□ 0.95
COX6B1-201ENST00000246554 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
COX6B1-201ENST00000246554 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
COX6B1-201ENST00000246554 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
COX6B1-201ENST00000246554 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
COX6B1-201ENST00000246554 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
COX6B1-201ENST00000246554 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
COX6B1-201ENST00000246554 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
COX6B1-201ENST00000246554 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.93
COX6B1-201ENST00000246554 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.93
COX6B1-201ENST00000246554 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.93
COX6B1-201ENST00000246554 ARHGEF11O15085 1522 aa20.83■□□□□ 0.92
COX6B1-201ENST00000246554 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
COX6B1-201ENST00000246554 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
COX6B1-201ENST00000246554 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
COX6B1-201ENST00000246554 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
COX6B1-201ENST00000246554 GRIN2AQ12879 1464 aa20.75■□□□□ 0.91
COX6B1-201ENST00000246554 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
COX6B1-201ENST00000246554 NUP160Q12769 1436 aa20.67■□□□□ 0.9
COX6B1-201ENST00000246554 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
COX6B1-201ENST00000246554 CUL7Q14999 1698 aa20.63■□□□□ 0.89
COX6B1-201ENST00000246554 IGF1RP08069 1367 aa20.61■□□□□ 0.89
COX6B1-201ENST00000246554 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
COX6B1-201ENST00000246554 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
COX6B1-201ENST00000246554 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
COX6B1-201ENST00000246554 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
COX6B1-201ENST00000246554 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
COX6B1-201ENST00000246554 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms