RNA–Protein interactions for RNA: ENST00000243325.6

RAB9A-201, Transcript of RAB9A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB9A, Length 393 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB9A-201ENST00000243325 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
RAB9A-201ENST00000243325 CCDC180Q9P1Z9 1646 aa36.14■■■■□ 3.38
RAB9A-201ENST00000243325 ABCC9O60706 1549 aa35.83■■■■□ 3.33
RAB9A-201ENST00000243325 DCAF8L2P0C7V8 631 aa34.26■■■■□ 3.08
RAB9A-201ENST00000243325 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
RAB9A-201ENST00000243325 NACADO15069 1562 aa34.12■■■■□ 3.05
RAB9A-201ENST00000243325 MYO15BQ96JP2 1530 aa33.78■■■■□ 3
RAB9A-201ENST00000243325 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
RAB9A-201ENST00000243325 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
RAB9A-201ENST00000243325 PABPN1Q86U42 306 aaKnown RBP eCLIP33.52■■■□□ 2.96
RAB9A-201ENST00000243325 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
RAB9A-201ENST00000243325 DNAJC5BQ9UF47 199 aa33.26■■■□□ 2.91
RAB9A-201ENST00000243325 BICRAQ9NZM4 1560 aa33.22■■■□□ 2.91
RAB9A-201ENST00000243325 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
RAB9A-201ENST00000243325 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
RAB9A-201ENST00000243325 EIF4G1Q04637 1599 aaKnown RBP32.38■■■□□ 2.77
RAB9A-201ENST00000243325 CC2D2AQ9P2K1 1620 aa32.34■■■□□ 2.77
RAB9A-201ENST00000243325 CECR2Q9BXF3 1484 aa32.22■■■□□ 2.75
RAB9A-201ENST00000243325 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
RAB9A-201ENST00000243325 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
RAB9A-201ENST00000243325 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
RAB9A-201ENST00000243325 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
RAB9A-201ENST00000243325 SMARCA2P51531 1590 aa31.41■■■□□ 2.62
RAB9A-201ENST00000243325 MROH2BQ7Z745 1585 aa31.32■■■□□ 2.6
RAB9A-201ENST00000243325 HMGXB3Q12766 1538 aa31.28■■■□□ 2.6
RAB9A-201ENST00000243325 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
RAB9A-201ENST00000243325 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
RAB9A-201ENST00000243325 WIZO95785 1651 aa30.96■■■□□ 2.55
RAB9A-201ENST00000243325 NESP48681 1621 aa30.91■■■□□ 2.54
RAB9A-201ENST00000243325 ERCC6Q03468 1493 aa30.89■■■□□ 2.54
RAB9A-201ENST00000243325 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
RAB9A-201ENST00000243325 LAMC3Q9Y6N6 1575 aa30.7■■■□□ 2.5
RAB9A-201ENST00000243325 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
RAB9A-201ENST00000243325 CUX2O14529 1486 aa30.63■■■□□ 2.49
RAB9A-201ENST00000243325 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.49
RAB9A-201ENST00000243325 PDS5BQ9NTI5 1447 aa30.57■■■□□ 2.48
RAB9A-201ENST00000243325 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
RAB9A-201ENST00000243325 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
RAB9A-201ENST00000243325 CFTRP13569 1480 aa30.34■■■□□ 2.45
RAB9A-201ENST00000243325 CCDC88BA6NC98 1476 aa30.29■■■□□ 2.44
RAB9A-201ENST00000243325 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.44
RAB9A-201ENST00000243325 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
RAB9A-201ENST00000243325 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
RAB9A-201ENST00000243325 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
RAB9A-201ENST00000243325 WDR62O43379 1518 aa30.13■■■□□ 2.41
RAB9A-201ENST00000243325 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
RAB9A-201ENST00000243325 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
RAB9A-201ENST00000243325 PRDM2Q13029 1718 aa29.96■■■□□ 2.39
RAB9A-201ENST00000243325 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
RAB9A-201ENST00000243325 ABCC8Q09428 1581 aa29.68■■■□□ 2.34
RAB9A-201ENST00000243325 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
RAB9A-201ENST00000243325 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
RAB9A-201ENST00000243325 ZNF608Q9ULD9 1512 aaPredicted RBP29.55■■■□□ 2.32
RAB9A-201ENST00000243325 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
RAB9A-201ENST00000243325 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
RAB9A-201ENST00000243325 TARBP1Q13395 1621 aaKnown RBP29.39■■■□□ 2.3
RAB9A-201ENST00000243325 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
RAB9A-201ENST00000243325 CUX1P39880 1505 aa29.39■■■□□ 2.3
RAB9A-201ENST00000243325 SOGA1O94964 1423 aa29.38■■■□□ 2.29
RAB9A-201ENST00000243325 AQRO60306 1485 aaKnown RBP eCLIP29.37■■■□□ 2.29
RAB9A-201ENST00000243325 FGD5Q6ZNL6 1462 aa29.35■■■□□ 2.29
RAB9A-201ENST00000243325 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
RAB9A-201ENST00000243325 TDRD9Q8NDG6 1382 aaKnown RBP29.28■■■□□ 2.28
RAB9A-201ENST00000243325 FBLN2P98095 1184 aa29.15■■■□□ 2.26
RAB9A-201ENST00000243325 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
RAB9A-201ENST00000243325 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
RAB9A-201ENST00000243325 WDR97A6NE52 1622 aa29.08■■■□□ 2.25
RAB9A-201ENST00000243325 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
RAB9A-201ENST00000243325 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
RAB9A-201ENST00000243325 GRIN2BQ13224 1484 aa29.03■■■□□ 2.24
RAB9A-201ENST00000243325 CHD1O14646 1710 aa29.03■■■□□ 2.24
RAB9A-201ENST00000243325 SYNJ1O43426 1573 aa29.02■■■□□ 2.24
RAB9A-201ENST00000243325 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
RAB9A-201ENST00000243325 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
RAB9A-201ENST00000243325 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
RAB9A-201ENST00000243325 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
RAB9A-201ENST00000243325 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
RAB9A-201ENST00000243325 ABCA5Q8WWZ7 1642 aa28.9■■■□□ 2.22
RAB9A-201ENST00000243325 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
RAB9A-201ENST00000243325 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
RAB9A-201ENST00000243325 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
RAB9A-201ENST00000243325 PBRM1Q86U86 1689 aa28.88■■■□□ 2.21
RAB9A-201ENST00000243325 SYNJ2O15056 1496 aa28.86■■■□□ 2.21
RAB9A-201ENST00000243325 ARHGEF11O15085 1522 aa28.85■■■□□ 2.21
RAB9A-201ENST00000243325 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
RAB9A-201ENST00000243325 CLASP1Q7Z460 1538 aa28.72■■■□□ 2.19
RAB9A-201ENST00000243325 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
RAB9A-201ENST00000243325 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
RAB9A-201ENST00000243325 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
RAB9A-201ENST00000243325 GRIN2AQ12879 1464 aa28.65■■■□□ 2.18
RAB9A-201ENST00000243325 ARAP1Q96P48 1450 aa28.61■■■□□ 2.17
RAB9A-201ENST00000243325 NUP160Q12769 1436 aa28.53■■■□□ 2.16
RAB9A-201ENST00000243325 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
RAB9A-201ENST00000243325 CEP170Q5SW79 1584 aa28.51■■■□□ 2.15
RAB9A-201ENST00000243325 IGF1RP08069 1367 aa28.49■■■□□ 2.15
RAB9A-201ENST00000243325 ERCC6L2Q5T890 1561 aa28.36■■■□□ 2.13
RAB9A-201ENST00000243325 JPH4Q96JJ6 628 aa28.33■■■□□ 2.13
RAB9A-201ENST00000243325 CUL7Q14999 1698 aa28.3■■■□□ 2.12
RAB9A-201ENST00000243325 SHROOM2Q13796 1616 aa28.3■■■□□ 2.12
RAB9A-201ENST00000243325 CARMIL1Q5VZK9 1371 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms