RNA–Protein interactions for RNA: ENST00000243219.7

LAMA4-202, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-202ENST00000243219 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
LAMA4-202ENST00000243219 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
LAMA4-202ENST00000243219 ABCC9O60706 1549 aa32.5■■■□□ 2.79
LAMA4-202ENST00000243219 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
LAMA4-202ENST00000243219 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
LAMA4-202ENST00000243219 NACADO15069 1562 aa30.75■■■□□ 2.51
LAMA4-202ENST00000243219 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
LAMA4-202ENST00000243219 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
LAMA4-202ENST00000243219 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
LAMA4-202ENST00000243219 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
LAMA4-202ENST00000243219 DNAJC5BQ9UF47 199 aa30.21■■■□□ 2.43
LAMA4-202ENST00000243219 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
LAMA4-202ENST00000243219 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
LAMA4-202ENST00000243219 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
LAMA4-202ENST00000243219 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
LAMA4-202ENST00000243219 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
LAMA4-202ENST00000243219 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
LAMA4-202ENST00000243219 CECR2Q9BXF3 1484 aa29.18■■■□□ 2.26
LAMA4-202ENST00000243219 SMARCA4P51532 1647 aa28.45■■■□□ 2.14
LAMA4-202ENST00000243219 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
LAMA4-202ENST00000243219 NCAPD3P42695 1498 aa28.39■■■□□ 2.13
LAMA4-202ENST00000243219 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.12
LAMA4-202ENST00000243219 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
LAMA4-202ENST00000243219 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
LAMA4-202ENST00000243219 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
LAMA4-202ENST00000243219 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
LAMA4-202ENST00000243219 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
LAMA4-202ENST00000243219 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
LAMA4-202ENST00000243219 NESP48681 1621 aa28■■■□□ 2.07
LAMA4-202ENST00000243219 WIZO95785 1651 aa27.91■■■□□ 2.06
LAMA4-202ENST00000243219 CUX2O14529 1486 aa27.73■■■□□ 2.03
LAMA4-202ENST00000243219 RSF1Q96T23 1441 aaPredicted RBP27.72■■■□□ 2.03
LAMA4-202ENST00000243219 LAMC3Q9Y6N6 1575 aa27.71■■■□□ 2.03
LAMA4-202ENST00000243219 KIF21AQ7Z4S6 1674 aa27.6■■■□□ 2.01
LAMA4-202ENST00000243219 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
LAMA4-202ENST00000243219 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2
LAMA4-202ENST00000243219 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
LAMA4-202ENST00000243219 TOP2AP11388 1531 aaKnown RBP27.51■■■□□ 2
LAMA4-202ENST00000243219 DNAJC5Q9H3Z4 198 aa27.44■■□□□ 1.98
LAMA4-202ENST00000243219 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
LAMA4-202ENST00000243219 CFTRP13569 1480 aa27.32■■□□□ 1.96
LAMA4-202ENST00000243219 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
LAMA4-202ENST00000243219 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
LAMA4-202ENST00000243219 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
LAMA4-202ENST00000243219 WDR62O43379 1518 aa27.22■■□□□ 1.95
LAMA4-202ENST00000243219 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
LAMA4-202ENST00000243219 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
LAMA4-202ENST00000243219 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
LAMA4-202ENST00000243219 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
LAMA4-202ENST00000243219 ZNF608Q9ULD9 1512 aaPredicted RBP26.73■■□□□ 1.87
LAMA4-202ENST00000243219 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
LAMA4-202ENST00000243219 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
LAMA4-202ENST00000243219 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
LAMA4-202ENST00000243219 OSCARQ8IYS5 282 aa26.6■■□□□ 1.85
LAMA4-202ENST00000243219 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
LAMA4-202ENST00000243219 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
LAMA4-202ENST00000243219 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
LAMA4-202ENST00000243219 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.84
LAMA4-202ENST00000243219 RAD54L2Q9Y4B4 1467 aa26.54■■□□□ 1.84
LAMA4-202ENST00000243219 TARBP1Q13395 1621 aaKnown RBP26.52■■□□□ 1.84
LAMA4-202ENST00000243219 CUX1P39880 1505 aa26.49■■□□□ 1.83
LAMA4-202ENST00000243219 SOGA1O94964 1423 aa26.48■■□□□ 1.83
LAMA4-202ENST00000243219 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
LAMA4-202ENST00000243219 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
LAMA4-202ENST00000243219 FBLN2P98095 1184 aa26.4■■□□□ 1.82
LAMA4-202ENST00000243219 CHD1O14646 1710 aa26.31■■□□□ 1.8
LAMA4-202ENST00000243219 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
LAMA4-202ENST00000243219 RIMBP3CA6NJZ7 1639 aa26.22■■□□□ 1.79
LAMA4-202ENST00000243219 RIMBP3BA6NNM3 1639 aa26.22■■□□□ 1.79
LAMA4-202ENST00000243219 RIMBP3Q9UFD9 1639 aa26.22■■□□□ 1.79
LAMA4-202ENST00000243219 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
LAMA4-202ENST00000243219 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
LAMA4-202ENST00000243219 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
LAMA4-202ENST00000243219 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
LAMA4-202ENST00000243219 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
LAMA4-202ENST00000243219 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
LAMA4-202ENST00000243219 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
LAMA4-202ENST00000243219 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
LAMA4-202ENST00000243219 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
LAMA4-202ENST00000243219 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
LAMA4-202ENST00000243219 TOP2BQ02880 1626 aa26.1■■□□□ 1.77
LAMA4-202ENST00000243219 BIVM-ERCC5R4GMW8 1640 aa26.08■■□□□ 1.77
LAMA4-202ENST00000243219 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
LAMA4-202ENST00000243219 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
LAMA4-202ENST00000243219 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
LAMA4-202ENST00000243219 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
LAMA4-202ENST00000243219 ARAP1Q96P48 1450 aa25.94■■□□□ 1.74
LAMA4-202ENST00000243219 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
LAMA4-202ENST00000243219 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
LAMA4-202ENST00000243219 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
LAMA4-202ENST00000243219 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
LAMA4-202ENST00000243219 CEP170Q5SW79 1584 aa25.76■■□□□ 1.71
LAMA4-202ENST00000243219 TRHP20396 242 aaPredicted RBP25.71■■□□□ 1.71
LAMA4-202ENST00000243219 NUP160Q12769 1436 aa25.71■■□□□ 1.71
LAMA4-202ENST00000243219 ERCC6L2Q5T890 1561 aa25.68■■□□□ 1.7
LAMA4-202ENST00000243219 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
LAMA4-202ENST00000243219 IGF1RP08069 1367 aa25.58■■□□□ 1.69
LAMA4-202ENST00000243219 SHROOM2Q13796 1616 aa25.53■■□□□ 1.68
LAMA4-202ENST00000243219 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
LAMA4-202ENST00000243219 PRG4Q92954 1404 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms