RNA–Protein interactions for RNA: ENST00000242607.12

HVCN1-201, Transcript of hydrogen voltage gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HVCN1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-201ENST00000242607 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
HVCN1-201ENST00000242607 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
HVCN1-201ENST00000242607 ABCC9O60706 1549 aa21.79■■□□□ 1.08
HVCN1-201ENST00000242607 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
HVCN1-201ENST00000242607 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
HVCN1-201ENST00000242607 NACADO15069 1562 aa20.78■□□□□ 0.92
HVCN1-201ENST00000242607 ZCCHC6Q5VYS8 1495 aaKnown RBP20.6■□□□□ 0.89
HVCN1-201ENST00000242607 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
HVCN1-201ENST00000242607 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
HVCN1-201ENST00000242607 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
HVCN1-201ENST00000242607 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
HVCN1-201ENST00000242607 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
HVCN1-201ENST00000242607 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
HVCN1-201ENST00000242607 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
HVCN1-201ENST00000242607 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
HVCN1-201ENST00000242607 EIF4G1Q04637 1599 aaKnown RBP19.68■□□□□ 0.74
HVCN1-201ENST00000242607 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
HVCN1-201ENST00000242607 CECR2Q9BXF3 1484 aa19.59■□□□□ 0.73
HVCN1-201ENST00000242607 BAZ1AQ9NRL2 1556 aaPredicted RBP19.24■□□□□ 0.67
HVCN1-201ENST00000242607 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
HVCN1-201ENST00000242607 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
HVCN1-201ENST00000242607 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
HVCN1-201ENST00000242607 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
HVCN1-201ENST00000242607 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
HVCN1-201ENST00000242607 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
HVCN1-201ENST00000242607 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
HVCN1-201ENST00000242607 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
HVCN1-201ENST00000242607 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
HVCN1-201ENST00000242607 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
HVCN1-201ENST00000242607 WIZO95785 1651 aa18.85■□□□□ 0.61
HVCN1-201ENST00000242607 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
HVCN1-201ENST00000242607 NESP48681 1621 aa18.78■□□□□ 0.6
HVCN1-201ENST00000242607 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
HVCN1-201ENST00000242607 CADPSQ9ULU8 1353 aa18.69■□□□□ 0.58
HVCN1-201ENST00000242607 TOP2AP11388 1531 aaKnown RBP18.68■□□□□ 0.58
HVCN1-201ENST00000242607 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
HVCN1-201ENST00000242607 CUX2O14529 1486 aa18.6■□□□□ 0.57
HVCN1-201ENST00000242607 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
HVCN1-201ENST00000242607 CFTRP13569 1480 aa18.51■□□□□ 0.55
HVCN1-201ENST00000242607 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
HVCN1-201ENST00000242607 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
HVCN1-201ENST00000242607 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
HVCN1-201ENST00000242607 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
HVCN1-201ENST00000242607 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
HVCN1-201ENST00000242607 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
HVCN1-201ENST00000242607 MRC2Q9UBG0 1479 aa18.43■□□□□ 0.54
HVCN1-201ENST00000242607 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
HVCN1-201ENST00000242607 WDR62O43379 1518 aa18.32■□□□□ 0.52
HVCN1-201ENST00000242607 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
HVCN1-201ENST00000242607 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
HVCN1-201ENST00000242607 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
HVCN1-201ENST00000242607 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
HVCN1-201ENST00000242607 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
HVCN1-201ENST00000242607 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
HVCN1-201ENST00000242607 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
HVCN1-201ENST00000242607 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
HVCN1-201ENST00000242607 SOGA1O94964 1423 aa17.96■□□□□ 0.47
HVCN1-201ENST00000242607 OSCARQ8IYS5 282 aa17.92■□□□□ 0.46
HVCN1-201ENST00000242607 FGD5Q6ZNL6 1462 aa17.92■□□□□ 0.46
HVCN1-201ENST00000242607 CUX1P39880 1505 aa17.92■□□□□ 0.46
HVCN1-201ENST00000242607 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
HVCN1-201ENST00000242607 AQRO60306 1485 aaKnown RBP eCLIP17.9■□□□□ 0.46
HVCN1-201ENST00000242607 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
HVCN1-201ENST00000242607 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
HVCN1-201ENST00000242607 FBLN2P98095 1184 aa17.85■□□□□ 0.45
HVCN1-201ENST00000242607 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
HVCN1-201ENST00000242607 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
HVCN1-201ENST00000242607 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
HVCN1-201ENST00000242607 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
HVCN1-201ENST00000242607 GRIN2BQ13224 1484 aa17.73■□□□□ 0.43
HVCN1-201ENST00000242607 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
HVCN1-201ENST00000242607 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
HVCN1-201ENST00000242607 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
HVCN1-201ENST00000242607 SNAPC4Q5SXM2 1469 aa17.71■□□□□ 0.43
HVCN1-201ENST00000242607 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
HVCN1-201ENST00000242607 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
HVCN1-201ENST00000242607 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
HVCN1-201ENST00000242607 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
HVCN1-201ENST00000242607 HRCP23327 699 aa17.65■□□□□ 0.42
HVCN1-201ENST00000242607 SYNJ2O15056 1496 aa17.61■□□□□ 0.41
HVCN1-201ENST00000242607 CHD1O14646 1710 aa17.59■□□□□ 0.41
HVCN1-201ENST00000242607 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
HVCN1-201ENST00000242607 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
HVCN1-201ENST00000242607 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.39
HVCN1-201ENST00000242607 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
HVCN1-201ENST00000242607 KIF27Q86VH2 1401 aa17.51■□□□□ 0.39
HVCN1-201ENST00000242607 ERICH3Q5RHP9 1530 aa17.5■□□□□ 0.39
HVCN1-201ENST00000242607 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
HVCN1-201ENST00000242607 RIMBP3CA6NJZ7 1639 aa17.48■□□□□ 0.39
HVCN1-201ENST00000242607 RIMBP3BA6NNM3 1639 aa17.48■□□□□ 0.39
HVCN1-201ENST00000242607 RIMBP3Q9UFD9 1639 aa17.48■□□□□ 0.39
HVCN1-201ENST00000242607 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
HVCN1-201ENST00000242607 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
HVCN1-201ENST00000242607 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
HVCN1-201ENST00000242607 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
HVCN1-201ENST00000242607 IGF1RP08069 1367 aa17.41■□□□□ 0.38
HVCN1-201ENST00000242607 NUP160Q12769 1436 aa17.38■□□□□ 0.37
HVCN1-201ENST00000242607 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
HVCN1-201ENST00000242607 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
HVCN1-201ENST00000242607 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms