RNA–Protein interactions for RNA: ENST00000240159.8

RNF170-201, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 2,023 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-201ENST00000240159 NISCHQ9Y2I1 1504 aa51.13■■■■■ 5.77
RNF170-201ENST00000240159 CCDC180Q9P1Z9 1646 aa44.48■■■■■ 4.71
RNF170-201ENST00000240159 ZCCHC6Q5VYS8 1495 aaKnown RBP42.97■■■■■ 4.47
RNF170-201ENST00000240159 DCAF1Q9Y4B6 1507 aa42.24■■■■■ 4.35
RNF170-201ENST00000240159 DCAF8L2P0C7V8 631 aa42.2■■■■■ 4.35
RNF170-201ENST00000240159 ABCC9O60706 1549 aa42■■■■■ 4.31
RNF170-201ENST00000240159 SHROOM4Q9ULL8 1493 aa41.84■■■■■ 4.29
RNF170-201ENST00000240159 MYO15BQ96JP2 1530 aa41.68■■■■■ 4.26
RNF170-201ENST00000240159 NACADO15069 1562 aa41.4■■■■■ 4.22
RNF170-201ENST00000240159 RB1CC1Q8TDY2 1594 aa41.02■■■■■ 4.16
RNF170-201ENST00000240159 SCRIBQ14160 1630 aa40.97■■■■■ 4.15
RNF170-201ENST00000240159 SUPT5HO00267 1087 aaKnown RBP40.32■■■■■ 4.05
RNF170-201ENST00000240159 UNC13AQ9UPW8 1703 aa40.23■■■■■ 4.03
RNF170-201ENST00000240159 BICRAQ9NZM4 1560 aa39.82■■■■□ 3.97
RNF170-201ENST00000240159 CECR2Q9BXF3 1484 aa39.75■■■■□ 3.95
RNF170-201ENST00000240159 RSF1Q96T23 1441 aaPredicted RBP39.73■■■■□ 3.95
RNF170-201ENST00000240159 PABPN1Q86U42 306 aaKnown RBP eCLIP39.65■■■■□ 3.94
RNF170-201ENST00000240159 MROH2BQ7Z745 1585 aa39.52■■■■□ 3.92
RNF170-201ENST00000240159 BAZ1AQ9NRL2 1556 aaPredicted RBP39.45■■■■□ 3.91
RNF170-201ENST00000240159 SMARCA4P51532 1647 aa39.27■■■■□ 3.88
RNF170-201ENST00000240159 WIZO95785 1651 aa39.21■■■■□ 3.87
RNF170-201ENST00000240159 TOP2AP11388 1531 aaKnown RBP38.78■■■■□ 3.8
RNF170-201ENST00000240159 PEG3Q9GZU2 1588 aa38.77■■■■□ 3.8
RNF170-201ENST00000240159 CHIC1Q5VXU3 224 aa38.66■■■■□ 3.78
RNF170-201ENST00000240159 ATAD2BQ9ULI0 1458 aa38.6■■■■□ 3.77
RNF170-201ENST00000240159 EIF4G1Q04637 1599 aaKnown RBP38.59■■■■□ 3.77
RNF170-201ENST00000240159 SMARCA2P51531 1590 aa38.55■■■■□ 3.76
RNF170-201ENST00000240159 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
RNF170-201ENST00000240159 BAZ1BQ9UIG0 1483 aaKnown RBP38.38■■■■□ 3.73
RNF170-201ENST00000240159 NCAPD3P42695 1498 aa38.23■■■■□ 3.71
RNF170-201ENST00000240159 HMGXB3Q12766 1538 aa38.18■■■■□ 3.7
RNF170-201ENST00000240159 CC2D2AQ9P2K1 1620 aa38■■■■□ 3.67
RNF170-201ENST00000240159 TRIM41Q8WV44 630 aa37.88■■■■□ 3.65
RNF170-201ENST00000240159 ABCC8Q09428 1581 aa37.66■■■■□ 3.62
RNF170-201ENST00000240159 CFTRP13569 1480 aa37.43■■■■□ 3.58
RNF170-201ENST00000240159 WRNQ14191 1432 aaPredicted RBP eCLIP37.38■■■■□ 3.57
RNF170-201ENST00000240159 CADPSQ9ULU8 1353 aa37.27■■■■□ 3.56
RNF170-201ENST00000240159 SYNJ1O43426 1573 aa37.23■■■■□ 3.55
RNF170-201ENST00000240159 FAM9AQ8IZU1 332 aaPredicted RBP37.22■■■■□ 3.55
RNF170-201ENST00000240159 PRDM2Q13029 1718 aa37.21■■■■□ 3.55
RNF170-201ENST00000240159 LOC105371045A0A1W2PR82 267 aa37.21■■■■□ 3.55
RNF170-201ENST00000240159 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
RNF170-201ENST00000240159 TOP2BQ02880 1626 aa37.05■■■■□ 3.52
RNF170-201ENST00000240159 BIVM-ERCC5R4GMW8 1640 aa37.01■■■■□ 3.51
RNF170-201ENST00000240159 SOGA1O94964 1423 aa36.98■■■■□ 3.51
RNF170-201ENST00000240159 CUX1P39880 1505 aa36.94■■■■□ 3.5
RNF170-201ENST00000240159 NESP48681 1621 aa36.93■■■■□ 3.5
RNF170-201ENST00000240159 LAMC3Q9Y6N6 1575 aa36.89■■■■□ 3.5
RNF170-201ENST00000240159 EEA1Q15075 1411 aa36.88■■■■□ 3.49
RNF170-201ENST00000240159 FANCD2Q9BXW9 1451 aa36.86■■■■□ 3.49
RNF170-201ENST00000240159 RUSC2Q8N2Y8 1516 aa36.85■■■■□ 3.49
RNF170-201ENST00000240159 EHMT2Q96KQ7 1210 aa36.71■■■■□ 3.47
RNF170-201ENST00000240159 CSRNP3Q8WYN3 585 aa36.7■■■■□ 3.47
RNF170-201ENST00000240159 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
RNF170-201ENST00000240159 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
RNF170-201ENST00000240159 DNMBPQ6XZF7 1577 aa36.55■■■■□ 3.44
RNF170-201ENST00000240159 FGD5Q6ZNL6 1462 aa36.51■■■■□ 3.44
RNF170-201ENST00000240159 TOPBP1Q92547 1522 aa36.48■■■■□ 3.43
RNF170-201ENST00000240159 KIF21AQ7Z4S6 1674 aa36.46■■■■□ 3.43
RNF170-201ENST00000240159 KIF21BO75037 1637 aa36.42■■■■□ 3.42
RNF170-201ENST00000240159 KIF27Q86VH2 1401 aa36.42■■■■□ 3.42
RNF170-201ENST00000240159 URB2Q14146 1524 aaKnown RBP36.41■■■■□ 3.42
RNF170-201ENST00000240159 GOLGA3Q08378 1498 aa36.41■■■■□ 3.42
RNF170-201ENST00000240159 POLA1P09884 1462 aaPredicted RBP36.32■■■■□ 3.41
RNF170-201ENST00000240159 TNIKQ9UKE5 1360 aa36.32■■■■□ 3.4
RNF170-201ENST00000240159 CUX2O14529 1486 aa36.3■■■■□ 3.4
RNF170-201ENST00000240159 UBTFP17480 764 aaKnown RBP36.25■■■■□ 3.39
RNF170-201ENST00000240159 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
RNF170-201ENST00000240159 RAPGEF2Q9Y4G8 1499 aa36.22■■■■□ 3.39
RNF170-201ENST00000240159 PRXQ9BXM0 1461 aa36.21■■■■□ 3.39
RNF170-201ENST00000240159 ABCA10Q8WWZ4 1543 aa36.18■■■■□ 3.38
RNF170-201ENST00000240159 CEP162Q5TB80 1403 aa36.15■■■■□ 3.38
RNF170-201ENST00000240159 ERICH3Q5RHP9 1530 aa36.15■■■■□ 3.38
RNF170-201ENST00000240159 MRC2Q9UBG0 1479 aa36.14■■■■□ 3.38
RNF170-201ENST00000240159 IGF1RP08069 1367 aa36.1■■■■□ 3.37
RNF170-201ENST00000240159 WDR97A6NE52 1622 aa36.05■■■■□ 3.36
RNF170-201ENST00000240159 ERCC6Q03468 1493 aa35.97■■■■□ 3.35
RNF170-201ENST00000240159 WDR62O43379 1518 aa35.95■■■■□ 3.35
RNF170-201ENST00000240159 TARBP1Q13395 1621 aaKnown RBP35.92■■■■□ 3.34
RNF170-201ENST00000240159 CARMIL1Q5VZK9 1371 aa35.91■■■■□ 3.34
RNF170-201ENST00000240159 ABCA5Q8WWZ7 1642 aa35.88■■■■□ 3.33
RNF170-201ENST00000240159 TDRD9Q8NDG6 1382 aaKnown RBP35.85■■■■□ 3.33
RNF170-201ENST00000240159 CLIP1P30622 1438 aa35.83■■■■□ 3.33
RNF170-201ENST00000240159 THOC2Q8NI27 1593 aaKnown RBP35.82■■■■□ 3.32
RNF170-201ENST00000240159 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
RNF170-201ENST00000240159 CUL7Q14999 1698 aa35.77■■■■□ 3.32
RNF170-201ENST00000240159 IFT140Q96RY7 1462 aa35.72■■■■□ 3.31
RNF170-201ENST00000240159 RANGAP1P46060 587 aaPredicted RBP35.66■■■■□ 3.3
RNF170-201ENST00000240159 PCGF6Q9BYE7 350 aa35.63■■■■□ 3.29
RNF170-201ENST00000240159 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.29
RNF170-201ENST00000240159 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
RNF170-201ENST00000240159 TRIM26Q12899 539 aaPredicted RBP35.57■■■■□ 3.29
RNF170-201ENST00000240159 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
RNF170-201ENST00000240159 VPS8Q8N3P4 1428 aa35.54■■■■□ 3.28
RNF170-201ENST00000240159 GRIN2BQ13224 1484 aa35.49■■■■□ 3.27
RNF170-201ENST00000240159 ARAP1Q96P48 1450 aa35.48■■■■□ 3.27
RNF170-201ENST00000240159 PPARGC1BQ86YN6 1023 aaKnown RBP35.47■■■■□ 3.27
RNF170-201ENST00000240159 ARHGAP35Q9NRY4 1499 aa35.45■■■■□ 3.27
RNF170-201ENST00000240159 EIF4G3O43432 1585 aaKnown RBP35.42■■■■□ 3.26
RNF170-201ENST00000240159 FHAD1B1AJZ9 1412 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms