RNA–Protein interactions for RNA: ENST00000237724.9

RAB3GAP2-201, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 3

Gene RAB3GAP2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-201ENST00000237724 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
RAB3GAP2-201ENST00000237724 ABCC9O60706 1549 aa36.03■■■■□ 3.36
RAB3GAP2-201ENST00000237724 CCDC180Q9P1Z9 1646 aa35.44■■■■□ 3.26
RAB3GAP2-201ENST00000237724 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
RAB3GAP2-201ENST00000237724 RB1CC1Q8TDY2 1594 aa34.01■■■■□ 3.03
RAB3GAP2-201ENST00000237724 NACADO15069 1562 aa33.61■■■□□ 2.97
RAB3GAP2-201ENST00000237724 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
RAB3GAP2-201ENST00000237724 PABPN1Q86U42 306 aaKnown RBP eCLIP33.49■■■□□ 2.95
RAB3GAP2-201ENST00000237724 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
RAB3GAP2-201ENST00000237724 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
RAB3GAP2-201ENST00000237724 MYO15BQ96JP2 1530 aa32.88■■■□□ 2.85
RAB3GAP2-201ENST00000237724 CC2D2AQ9P2K1 1620 aa32.51■■■□□ 2.79
RAB3GAP2-201ENST00000237724 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
RAB3GAP2-201ENST00000237724 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
RAB3GAP2-201ENST00000237724 ZCCHC6Q5VYS8 1495 aaKnown RBP32.38■■■□□ 2.77
RAB3GAP2-201ENST00000237724 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
RAB3GAP2-201ENST00000237724 DCAF1Q9Y4B6 1507 aa32.3■■■□□ 2.76
RAB3GAP2-201ENST00000237724 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
RAB3GAP2-201ENST00000237724 DNAJC5Q9H3Z4 198 aa31.79■■■□□ 2.68
RAB3GAP2-201ENST00000237724 CUX2O14529 1486 aa31.18■■■□□ 2.58
RAB3GAP2-201ENST00000237724 ERCC6Q03468 1493 aa31.14■■■□□ 2.58
RAB3GAP2-201ENST00000237724 NCAPD3P42695 1498 aa31.01■■■□□ 2.55
RAB3GAP2-201ENST00000237724 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
RAB3GAP2-201ENST00000237724 NESP48681 1621 aa30.8■■■□□ 2.52
RAB3GAP2-201ENST00000237724 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
RAB3GAP2-201ENST00000237724 SMARCA4P51532 1647 aa30.76■■■□□ 2.51
RAB3GAP2-201ENST00000237724 HMGXB3Q12766 1538 aa30.75■■■□□ 2.51
RAB3GAP2-201ENST00000237724 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
RAB3GAP2-201ENST00000237724 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
RAB3GAP2-201ENST00000237724 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
RAB3GAP2-201ENST00000237724 LAMC3Q9Y6N6 1575 aa30.44■■■□□ 2.46
RAB3GAP2-201ENST00000237724 KIF21AQ7Z4S6 1674 aa30.43■■■□□ 2.46
RAB3GAP2-201ENST00000237724 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
RAB3GAP2-201ENST00000237724 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
RAB3GAP2-201ENST00000237724 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
RAB3GAP2-201ENST00000237724 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
RAB3GAP2-201ENST00000237724 CADPSQ9ULU8 1353 aa30.08■■■□□ 2.41
RAB3GAP2-201ENST00000237724 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
RAB3GAP2-201ENST00000237724 WDR62O43379 1518 aa29.98■■■□□ 2.39
RAB3GAP2-201ENST00000237724 WIZO95785 1651 aa29.94■■■□□ 2.38
RAB3GAP2-201ENST00000237724 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
RAB3GAP2-201ENST00000237724 FANCD2Q9BXW9 1451 aa29.77■■■□□ 2.36
RAB3GAP2-201ENST00000237724 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
RAB3GAP2-201ENST00000237724 CFTRP13569 1480 aa29.61■■■□□ 2.33
RAB3GAP2-201ENST00000237724 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
RAB3GAP2-201ENST00000237724 RIMBP3CA6NJZ7 1639 aa29.43■■■□□ 2.3
RAB3GAP2-201ENST00000237724 RIMBP3BA6NNM3 1639 aa29.43■■■□□ 2.3
RAB3GAP2-201ENST00000237724 RIMBP3Q9UFD9 1639 aa29.43■■■□□ 2.3
RAB3GAP2-201ENST00000237724 TOP2AP11388 1531 aaKnown RBP29.43■■■□□ 2.3
RAB3GAP2-201ENST00000237724 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
RAB3GAP2-201ENST00000237724 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
RAB3GAP2-201ENST00000237724 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
RAB3GAP2-201ENST00000237724 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
RAB3GAP2-201ENST00000237724 ARHGEF11O15085 1522 aa29.24■■■□□ 2.27
RAB3GAP2-201ENST00000237724 TOPBP1Q92547 1522 aa29.15■■■□□ 2.26
RAB3GAP2-201ENST00000237724 CCDC88BA6NC98 1476 aa29.13■■■□□ 2.25
RAB3GAP2-201ENST00000237724 CYB5RLQ6IPT4 315 aa29.12■■■□□ 2.25
RAB3GAP2-201ENST00000237724 EIF4G3O43432 1585 aaKnown RBP29.11■■■□□ 2.25
RAB3GAP2-201ENST00000237724 CHD1O14646 1710 aa29.08■■■□□ 2.25
RAB3GAP2-201ENST00000237724 TRHP20396 242 aaPredicted RBP29.01■■■□□ 2.23
RAB3GAP2-201ENST00000237724 ABCC8Q09428 1581 aa29.01■■■□□ 2.23
RAB3GAP2-201ENST00000237724 DNMBPQ6XZF7 1577 aa28.99■■■□□ 2.23
RAB3GAP2-201ENST00000237724 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.23
RAB3GAP2-201ENST00000237724 FBLN2P98095 1184 aa28.97■■■□□ 2.23
RAB3GAP2-201ENST00000237724 TARBP1Q13395 1621 aaKnown RBP28.93■■■□□ 2.22
RAB3GAP2-201ENST00000237724 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
RAB3GAP2-201ENST00000237724 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
RAB3GAP2-201ENST00000237724 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
RAB3GAP2-201ENST00000237724 TDRD9Q8NDG6 1382 aaKnown RBP28.72■■■□□ 2.19
RAB3GAP2-201ENST00000237724 SOGA1O94964 1423 aa28.69■■■□□ 2.18
RAB3GAP2-201ENST00000237724 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
RAB3GAP2-201ENST00000237724 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
RAB3GAP2-201ENST00000237724 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
RAB3GAP2-201ENST00000237724 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
RAB3GAP2-201ENST00000237724 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
RAB3GAP2-201ENST00000237724 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
RAB3GAP2-201ENST00000237724 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
RAB3GAP2-201ENST00000237724 MAGI1Q96QZ7 1491 aaPredicted RBP28.51■■■□□ 2.15
RAB3GAP2-201ENST00000237724 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
RAB3GAP2-201ENST00000237724 CUX1P39880 1505 aa28.47■■■□□ 2.15
RAB3GAP2-201ENST00000237724 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
RAB3GAP2-201ENST00000237724 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
RAB3GAP2-201ENST00000237724 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
RAB3GAP2-201ENST00000237724 ABCA5Q8WWZ7 1642 aa28.21■■■□□ 2.11
RAB3GAP2-201ENST00000237724 ERCC6L2Q5T890 1561 aa28.2■■■□□ 2.1
RAB3GAP2-201ENST00000237724 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
RAB3GAP2-201ENST00000237724 GRIN2AQ12879 1464 aa28.11■■■□□ 2.09
RAB3GAP2-201ENST00000237724 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
RAB3GAP2-201ENST00000237724 ADAMTS12P58397 1594 aa28.03■■■□□ 2.08
RAB3GAP2-201ENST00000237724 NUP160Q12769 1436 aa28■■■□□ 2.07
RAB3GAP2-201ENST00000237724 KIF13AQ9H1H9 1805 aa27.99■■■□□ 2.07
RAB3GAP2-201ENST00000237724 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.07
RAB3GAP2-201ENST00000237724 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
RAB3GAP2-201ENST00000237724 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
RAB3GAP2-201ENST00000237724 BIVM-ERCC5R4GMW8 1640 aa27.88■■■□□ 2.05
RAB3GAP2-201ENST00000237724 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
RAB3GAP2-201ENST00000237724 TOP2BQ02880 1626 aa27.85■■■□□ 2.05
RAB3GAP2-201ENST00000237724 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
RAB3GAP2-201ENST00000237724 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
RAB3GAP2-201ENST00000237724 JPH4Q96JJ6 628 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms