RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 NISCHQ9Y2I1 1504 aa13.96□□□□□ -0.17
SGIP1-201ENST00000237247 CCDC180Q9P1Z9 1646 aa12.57□□□□□ -0.4
SGIP1-201ENST00000237247 DCAF1Q9Y4B6 1507 aa11.92□□□□□ -0.5
SGIP1-201ENST00000237247 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
SGIP1-201ENST00000237247 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
SGIP1-201ENST00000237247 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
SGIP1-201ENST00000237247 NACADO15069 1562 aa11.35□□□□□ -0.59
SGIP1-201ENST00000237247 ABCC9O60706 1549 aa11.21□□□□□ -0.61
SGIP1-201ENST00000237247 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
SGIP1-201ENST00000237247 PELP1Q8IZL8 1130 aaKnown RBP11.09□□□□□ -0.63
SGIP1-201ENST00000237247 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
SGIP1-201ENST00000237247 EIF4G1Q04637 1599 aaKnown RBP11.05□□□□□ -0.64
SGIP1-201ENST00000237247 SHROOM4Q9ULL8 1493 aa11.03□□□□□ -0.64
SGIP1-201ENST00000237247 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
SGIP1-201ENST00000237247 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
SGIP1-201ENST00000237247 MYT1Q01538 1121 aa10.93□□□□□ -0.66
SGIP1-201ENST00000237247 BAZ1AQ9NRL2 1556 aaPredicted RBP10.83□□□□□ -0.68
SGIP1-201ENST00000237247 SMARCA4P51532 1647 aa10.82□□□□□ -0.68
SGIP1-201ENST00000237247 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
SGIP1-201ENST00000237247 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
SGIP1-201ENST00000237247 WIZO95785 1651 aa10.71□□□□□ -0.69
SGIP1-201ENST00000237247 RSF1Q96T23 1441 aaPredicted RBP10.69□□□□□ -0.7
SGIP1-201ENST00000237247 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
SGIP1-201ENST00000237247 TOP2AP11388 1531 aaKnown RBP10.63□□□□□ -0.71
SGIP1-201ENST00000237247 SMARCA2P51531 1590 aa10.61□□□□□ -0.71
SGIP1-201ENST00000237247 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
SGIP1-201ENST00000237247 TTBK1Q5TCY1 1321 aaPredicted RBP10.55□□□□□ -0.72
SGIP1-201ENST00000237247 ATAD2BQ9ULI0 1458 aa10.42□□□□□ -0.74
SGIP1-201ENST00000237247 BIVM-ERCC5R4GMW8 1640 aa10.41□□□□□ -0.74
SGIP1-201ENST00000237247 NCAPD3P42695 1498 aa10.4□□□□□ -0.74
SGIP1-201ENST00000237247 HRCP23327 699 aa10.38□□□□□ -0.75
SGIP1-201ENST00000237247 CHIC1Q5VXU3 224 aa10.35□□□□□ -0.75
SGIP1-201ENST00000237247 SUPT5HO00267 1087 aaKnown RBP10.35□□□□□ -0.75
SGIP1-201ENST00000237247 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
SGIP1-201ENST00000237247 CCDC88BA6NC98 1476 aa10.32□□□□□ -0.76
SGIP1-201ENST00000237247 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
SGIP1-201ENST00000237247 TOP2BQ02880 1626 aa10.22□□□□□ -0.77
SGIP1-201ENST00000237247 SYNJ1O43426 1573 aa10.2□□□□□ -0.78
SGIP1-201ENST00000237247 CFTRP13569 1480 aa10.18□□□□□ -0.78
SGIP1-201ENST00000237247 BAZ1BQ9UIG0 1483 aaKnown RBP10.11□□□□□ -0.79
SGIP1-201ENST00000237247 LAMC3Q9Y6N6 1575 aa10.09□□□□□ -0.79
SGIP1-201ENST00000237247 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
SGIP1-201ENST00000237247 CUX1P39880 1505 aa10.07□□□□□ -0.8
SGIP1-201ENST00000237247 SCAF1Q9H7N4 1312 aaKnown RBP10.07□□□□□ -0.8
SGIP1-201ENST00000237247 KIF21BO75037 1637 aa10.05□□□□□ -0.8
SGIP1-201ENST00000237247 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
SGIP1-201ENST00000237247 TARBP1Q13395 1621 aaKnown RBP10.04□□□□□ -0.8
SGIP1-201ENST00000237247 THOC2Q8NI27 1593 aaKnown RBP10.04□□□□□ -0.8
SGIP1-201ENST00000237247 ABCA5Q8WWZ7 1642 aa10.03□□□□□ -0.8
SGIP1-201ENST00000237247 PCGF6Q9BYE7 350 aa10.03□□□□□ -0.8
SGIP1-201ENST00000237247 TRIM26Q12899 539 aaPredicted RBP10.01□□□□□ -0.81
SGIP1-201ENST00000237247 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
SGIP1-201ENST00000237247 ZEB1P37275 1124 aaPredicted RBP9.97□□□□□ -0.81
SGIP1-201ENST00000237247 DNMBPQ6XZF7 1577 aa9.96□□□□□ -0.81
SGIP1-201ENST00000237247 WDR62O43379 1518 aa9.94□□□□□ -0.82
SGIP1-201ENST00000237247 APLP2Q06481 763 aa9.93□□□□□ -0.82
SGIP1-201ENST00000237247 PBRM1Q86U86 1689 aa9.91□□□□□ -0.82
SGIP1-201ENST00000237247 ERICH3Q5RHP9 1530 aa9.91□□□□□ -0.82
SGIP1-201ENST00000237247 ERICH6Q7L0X2 663 aa9.9□□□□□ -0.82
SGIP1-201ENST00000237247 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
SGIP1-201ENST00000237247 DCAF8L2P0C7V8 631 aa9.89□□□□□ -0.83
SGIP1-201ENST00000237247 LRRIQ1Q96JM4 1722 aa9.89□□□□□ -0.83
SGIP1-201ENST00000237247 URB2Q14146 1524 aaKnown RBP9.88□□□□□ -0.83
SGIP1-201ENST00000237247 LOC105371045A0A1W2PR82 267 aa9.86□□□□□ -0.83
SGIP1-201ENST00000237247 PPARGC1BQ86YN6 1023 aaKnown RBP9.86□□□□□ -0.83
SGIP1-201ENST00000237247 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
SGIP1-201ENST00000237247 PRXQ9BXM0 1461 aa9.86□□□□□ -0.83
SGIP1-201ENST00000237247 CTTNBP2Q8WZ74 1663 aa9.85□□□□□ -0.83
SGIP1-201ENST00000237247 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
SGIP1-201ENST00000237247 CUL7Q14999 1698 aa9.83□□□□□ -0.84
SGIP1-201ENST00000237247 RUSC2Q8N2Y8 1516 aa9.83□□□□□ -0.84
SGIP1-201ENST00000237247 CADPSQ9ULU8 1353 aa9.83□□□□□ -0.84
SGIP1-201ENST00000237247 TOPBP1Q92547 1522 aa9.81□□□□□ -0.84
SGIP1-201ENST00000237247 WRNQ14191 1432 aaPredicted RBP eCLIP9.8□□□□□ -0.84
SGIP1-201ENST00000237247 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
SGIP1-201ENST00000237247 NESP48681 1621 aa9.79□□□□□ -0.84
SGIP1-201ENST00000237247 EEA1Q15075 1411 aa9.79□□□□□ -0.84
SGIP1-201ENST00000237247 CUX2O14529 1486 aa9.78□□□□□ -0.84
SGIP1-201ENST00000237247 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
SGIP1-201ENST00000237247 FANCD2Q9BXW9 1451 aa9.75□□□□□ -0.85
SGIP1-201ENST00000237247 SOGA1O94964 1423 aa9.75□□□□□ -0.85
SGIP1-201ENST00000237247 POLA1P09884 1462 aaPredicted RBP9.74□□□□□ -0.85
SGIP1-201ENST00000237247 ADAMTS12P58397 1594 aa9.73□□□□□ -0.85
SGIP1-201ENST00000237247 FAM9AQ8IZU1 332 aaPredicted RBP9.73□□□□□ -0.85
SGIP1-201ENST00000237247 CFAP43Q8NDM7 1665 aa9.72□□□□□ -0.85
SGIP1-201ENST00000237247 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.86
SGIP1-201ENST00000237247 SHROOM2Q13796 1616 aa9.7□□□□□ -0.86
SGIP1-201ENST00000237247 CENPBP07199 599 aaPredicted RBP9.69□□□□□ -0.86
SGIP1-201ENST00000237247 ACIN1Q9UKV3 1341 aaKnown RBP9.69□□□□□ -0.86
SGIP1-201ENST00000237247 DNAJC5BQ9UF47 199 aa9.69□□□□□ -0.86
SGIP1-201ENST00000237247 EIF4G3O43432 1585 aaKnown RBP9.68□□□□□ -0.86
SGIP1-201ENST00000237247 MRC2Q9UBG0 1479 aa9.64□□□□□ -0.87
SGIP1-201ENST00000237247 CEP164Q9UPV0 1460 aa9.64□□□□□ -0.87
SGIP1-201ENST00000237247 MAP3K1Q13233 1512 aa9.62□□□□□ -0.87
SGIP1-201ENST00000237247 ARAP1Q96P48 1450 aa9.62□□□□□ -0.87
SGIP1-201ENST00000237247 RAPGEF2Q9Y4G8 1499 aa9.61□□□□□ -0.87
SGIP1-201ENST00000237247 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
SGIP1-201ENST00000237247 ARHGEF11O15085 1522 aa9.59□□□□□ -0.87
SGIP1-201ENST00000237247 TNIKQ9UKE5 1360 aa9.59□□□□□ -0.87
SGIP1-201ENST00000237247 GOLGA3Q08378 1498 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms