RNA–Protein interactions for RNA: ENST00000231338.7

C1QTNF3-201, Transcript of C1q and TNF related 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C1QTNF3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-201ENST00000231338 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
C1QTNF3-201ENST00000231338 ABCC9O60706 1549 aa27.04■■□□□ 1.92
C1QTNF3-201ENST00000231338 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
C1QTNF3-201ENST00000231338 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
C1QTNF3-201ENST00000231338 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
C1QTNF3-201ENST00000231338 NACADO15069 1562 aa25.27■■□□□ 1.64
C1QTNF3-201ENST00000231338 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
C1QTNF3-201ENST00000231338 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
C1QTNF3-201ENST00000231338 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
C1QTNF3-201ENST00000231338 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
C1QTNF3-201ENST00000231338 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
C1QTNF3-201ENST00000231338 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
C1QTNF3-201ENST00000231338 ZCCHC6Q5VYS8 1495 aaKnown RBP24.4■■□□□ 1.5
C1QTNF3-201ENST00000231338 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.5
C1QTNF3-201ENST00000231338 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
C1QTNF3-201ENST00000231338 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
C1QTNF3-201ENST00000231338 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
C1QTNF3-201ENST00000231338 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
C1QTNF3-201ENST00000231338 DNAJC5Q9H3Z4 198 aa23.82■■□□□ 1.4
C1QTNF3-201ENST00000231338 CUX2O14529 1486 aa23.43■■□□□ 1.34
C1QTNF3-201ENST00000231338 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
C1QTNF3-201ENST00000231338 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
C1QTNF3-201ENST00000231338 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
C1QTNF3-201ENST00000231338 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
C1QTNF3-201ENST00000231338 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
C1QTNF3-201ENST00000231338 NESP48681 1621 aa23.12■■□□□ 1.29
C1QTNF3-201ENST00000231338 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
C1QTNF3-201ENST00000231338 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
C1QTNF3-201ENST00000231338 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
C1QTNF3-201ENST00000231338 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
C1QTNF3-201ENST00000231338 PEG3Q9GZU2 1588 aa22.87■■□□□ 1.25
C1QTNF3-201ENST00000231338 LAMC3Q9Y6N6 1575 aa22.87■■□□□ 1.25
C1QTNF3-201ENST00000231338 KIF21AQ7Z4S6 1674 aa22.82■■□□□ 1.24
C1QTNF3-201ENST00000231338 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
C1QTNF3-201ENST00000231338 PDS5BQ9NTI5 1447 aa22.75■■□□□ 1.23
C1QTNF3-201ENST00000231338 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
C1QTNF3-201ENST00000231338 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
C1QTNF3-201ENST00000231338 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
C1QTNF3-201ENST00000231338 WDR62O43379 1518 aa22.55■■□□□ 1.2
C1QTNF3-201ENST00000231338 WIZO95785 1651 aa22.48■■□□□ 1.19
C1QTNF3-201ENST00000231338 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
C1QTNF3-201ENST00000231338 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
C1QTNF3-201ENST00000231338 OSCARQ8IYS5 282 aa22.28■■□□□ 1.16
C1QTNF3-201ENST00000231338 CFTRP13569 1480 aa22.28■■□□□ 1.16
C1QTNF3-201ENST00000231338 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
C1QTNF3-201ENST00000231338 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
C1QTNF3-201ENST00000231338 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
C1QTNF3-201ENST00000231338 RIMBP3CA6NJZ7 1639 aa22.07■■□□□ 1.12
C1QTNF3-201ENST00000231338 RIMBP3BA6NNM3 1639 aa22.07■■□□□ 1.12
C1QTNF3-201ENST00000231338 RIMBP3Q9UFD9 1639 aa22.07■■□□□ 1.12
C1QTNF3-201ENST00000231338 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
C1QTNF3-201ENST00000231338 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.11
C1QTNF3-201ENST00000231338 IFT140Q96RY7 1462 aa22■■□□□ 1.11
C1QTNF3-201ENST00000231338 ARHGEF11O15085 1522 aa21.95■■□□□ 1.1
C1QTNF3-201ENST00000231338 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
C1QTNF3-201ENST00000231338 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
C1QTNF3-201ENST00000231338 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
C1QTNF3-201ENST00000231338 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
C1QTNF3-201ENST00000231338 DNMBPQ6XZF7 1577 aa21.8■■□□□ 1.08
C1QTNF3-201ENST00000231338 CYB5RLQ6IPT4 315 aa21.8■■□□□ 1.08
C1QTNF3-201ENST00000231338 CHD1O14646 1710 aa21.78■■□□□ 1.08
C1QTNF3-201ENST00000231338 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.07
C1QTNF3-201ENST00000231338 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
C1QTNF3-201ENST00000231338 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
C1QTNF3-201ENST00000231338 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
C1QTNF3-201ENST00000231338 FBLN2P98095 1184 aa21.68■■□□□ 1.06
C1QTNF3-201ENST00000231338 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
C1QTNF3-201ENST00000231338 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
C1QTNF3-201ENST00000231338 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
C1QTNF3-201ENST00000231338 SOGA1O94964 1423 aa21.55■■□□□ 1.04
C1QTNF3-201ENST00000231338 SNAPC4Q5SXM2 1469 aa21.54■■□□□ 1.04
C1QTNF3-201ENST00000231338 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
C1QTNF3-201ENST00000231338 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
C1QTNF3-201ENST00000231338 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
C1QTNF3-201ENST00000231338 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
C1QTNF3-201ENST00000231338 CHMP7Q8WUX9 453 aaPredicted RBP21.45■■□□□ 1.02
C1QTNF3-201ENST00000231338 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
C1QTNF3-201ENST00000231338 GRIN2BQ13224 1484 aa21.41■■□□□ 1.02
C1QTNF3-201ENST00000231338 CUX1P39880 1505 aa21.41■■□□□ 1.02
C1QTNF3-201ENST00000231338 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
C1QTNF3-201ENST00000231338 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
C1QTNF3-201ENST00000231338 PBRM1Q86U86 1689 aa21.32■■□□□ 1
C1QTNF3-201ENST00000231338 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
C1QTNF3-201ENST00000231338 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
C1QTNF3-201ENST00000231338 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
C1QTNF3-201ENST00000231338 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
C1QTNF3-201ENST00000231338 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
C1QTNF3-201ENST00000231338 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
C1QTNF3-201ENST00000231338 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
C1QTNF3-201ENST00000231338 NUP160Q12769 1436 aa21.08■□□□□ 0.96
C1QTNF3-201ENST00000231338 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
C1QTNF3-201ENST00000231338 SHROOM2Q13796 1616 aa21.03■□□□□ 0.96
C1QTNF3-201ENST00000231338 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
C1QTNF3-201ENST00000231338 BIVM-ERCC5R4GMW8 1640 aa20.97■□□□□ 0.95
C1QTNF3-201ENST00000231338 KIF13AQ9H1H9 1805 aa20.95■□□□□ 0.94
C1QTNF3-201ENST00000231338 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
C1QTNF3-201ENST00000231338 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
C1QTNF3-201ENST00000231338 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
C1QTNF3-201ENST00000231338 PRG4Q92954 1404 aaPredicted RBP20.91■□□□□ 0.94
C1QTNF3-201ENST00000231338 JPH4Q96JJ6 628 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms