RNA–Protein interactions for RNA: ENST00000226524.3

PF4V1-201, Transcript of platelet factor 4 variant 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4V1, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1-201ENST00000226524 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
PF4V1-201ENST00000226524 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
PF4V1-201ENST00000226524 ABCC9O60706 1549 aa23.43■■□□□ 1.34
PF4V1-201ENST00000226524 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
PF4V1-201ENST00000226524 NACADO15069 1562 aa22.41■■□□□ 1.18
PF4V1-201ENST00000226524 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
PF4V1-201ENST00000226524 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
PF4V1-201ENST00000226524 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
PF4V1-201ENST00000226524 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
PF4V1-201ENST00000226524 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.09
PF4V1-201ENST00000226524 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.08
PF4V1-201ENST00000226524 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
PF4V1-201ENST00000226524 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
PF4V1-201ENST00000226524 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
PF4V1-201ENST00000226524 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
PF4V1-201ENST00000226524 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
PF4V1-201ENST00000226524 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.98
PF4V1-201ENST00000226524 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
PF4V1-201ENST00000226524 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
PF4V1-201ENST00000226524 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
PF4V1-201ENST00000226524 SMARCA4P51532 1647 aa20.59■□□□□ 0.89
PF4V1-201ENST00000226524 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
PF4V1-201ENST00000226524 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
PF4V1-201ENST00000226524 HMGXB3Q12766 1538 aa20.52■□□□□ 0.87
PF4V1-201ENST00000226524 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
PF4V1-201ENST00000226524 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
PF4V1-201ENST00000226524 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
PF4V1-201ENST00000226524 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
PF4V1-201ENST00000226524 CUX2O14529 1486 aa20.25■□□□□ 0.83
PF4V1-201ENST00000226524 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
PF4V1-201ENST00000226524 NESP48681 1621 aa20.13■□□□□ 0.81
PF4V1-201ENST00000226524 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
PF4V1-201ENST00000226524 WIZO95785 1651 aa20.07■□□□□ 0.8
PF4V1-201ENST00000226524 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
PF4V1-201ENST00000226524 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
PF4V1-201ENST00000226524 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
PF4V1-201ENST00000226524 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
PF4V1-201ENST00000226524 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
PF4V1-201ENST00000226524 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
PF4V1-201ENST00000226524 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
PF4V1-201ENST00000226524 CFTRP13569 1480 aa19.83■□□□□ 0.76
PF4V1-201ENST00000226524 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
PF4V1-201ENST00000226524 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
PF4V1-201ENST00000226524 WDR62O43379 1518 aa19.76■□□□□ 0.75
PF4V1-201ENST00000226524 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
PF4V1-201ENST00000226524 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
PF4V1-201ENST00000226524 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
PF4V1-201ENST00000226524 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
PF4V1-201ENST00000226524 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
PF4V1-201ENST00000226524 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
PF4V1-201ENST00000226524 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
PF4V1-201ENST00000226524 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
PF4V1-201ENST00000226524 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
PF4V1-201ENST00000226524 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
PF4V1-201ENST00000226524 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
PF4V1-201ENST00000226524 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
PF4V1-201ENST00000226524 TARBP1Q13395 1621 aaKnown RBP19.19■□□□□ 0.66
PF4V1-201ENST00000226524 SOGA1O94964 1423 aa19.18■□□□□ 0.66
PF4V1-201ENST00000226524 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
PF4V1-201ENST00000226524 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
PF4V1-201ENST00000226524 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.65
PF4V1-201ENST00000226524 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
PF4V1-201ENST00000226524 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
PF4V1-201ENST00000226524 CUX1P39880 1505 aa19.09■□□□□ 0.65
PF4V1-201ENST00000226524 FBLN2P98095 1184 aa19.06■□□□□ 0.64
PF4V1-201ENST00000226524 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
PF4V1-201ENST00000226524 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
PF4V1-201ENST00000226524 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
PF4V1-201ENST00000226524 CHD1O14646 1710 aa19■□□□□ 0.63
PF4V1-201ENST00000226524 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
PF4V1-201ENST00000226524 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
PF4V1-201ENST00000226524 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
PF4V1-201ENST00000226524 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
PF4V1-201ENST00000226524 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
PF4V1-201ENST00000226524 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
PF4V1-201ENST00000226524 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
PF4V1-201ENST00000226524 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
PF4V1-201ENST00000226524 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
PF4V1-201ENST00000226524 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
PF4V1-201ENST00000226524 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
PF4V1-201ENST00000226524 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
PF4V1-201ENST00000226524 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
PF4V1-201ENST00000226524 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
PF4V1-201ENST00000226524 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
PF4V1-201ENST00000226524 CYB5RLQ6IPT4 315 aa18.84■□□□□ 0.61
PF4V1-201ENST00000226524 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
PF4V1-201ENST00000226524 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
PF4V1-201ENST00000226524 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
PF4V1-201ENST00000226524 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
PF4V1-201ENST00000226524 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
PF4V1-201ENST00000226524 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
PF4V1-201ENST00000226524 NUP160Q12769 1436 aa18.66■□□□□ 0.58
PF4V1-201ENST00000226524 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
PF4V1-201ENST00000226524 KIF27Q86VH2 1401 aa18.61■□□□□ 0.57
PF4V1-201ENST00000226524 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
PF4V1-201ENST00000226524 SHROOM2Q13796 1616 aa18.53■□□□□ 0.56
PF4V1-201ENST00000226524 CUL7Q14999 1698 aa18.52■□□□□ 0.56
PF4V1-201ENST00000226524 JPH4Q96JJ6 628 aa18.51■□□□□ 0.55
PF4V1-201ENST00000226524 IGF1RP08069 1367 aa18.5■□□□□ 0.55
PF4V1-201ENST00000226524 PRG4Q92954 1404 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms