RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
RTCB-201ENST00000216038 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
RTCB-201ENST00000216038 ABCC9O60706 1549 aa19.64■□□□□ 0.73
RTCB-201ENST00000216038 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
RTCB-201ENST00000216038 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
RTCB-201ENST00000216038 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
RTCB-201ENST00000216038 NACADO15069 1562 aa19.02■□□□□ 0.64
RTCB-201ENST00000216038 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
RTCB-201ENST00000216038 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
RTCB-201ENST00000216038 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
RTCB-201ENST00000216038 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
RTCB-201ENST00000216038 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
RTCB-201ENST00000216038 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
RTCB-201ENST00000216038 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
RTCB-201ENST00000216038 CECR2Q9BXF3 1484 aa18.09■□□□□ 0.49
RTCB-201ENST00000216038 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
RTCB-201ENST00000216038 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
RTCB-201ENST00000216038 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
RTCB-201ENST00000216038 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
RTCB-201ENST00000216038 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.46
RTCB-201ENST00000216038 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
RTCB-201ENST00000216038 WIZO95785 1651 aa17.78■□□□□ 0.44
RTCB-201ENST00000216038 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
RTCB-201ENST00000216038 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
RTCB-201ENST00000216038 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
RTCB-201ENST00000216038 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
RTCB-201ENST00000216038 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
RTCB-201ENST00000216038 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
RTCB-201ENST00000216038 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
RTCB-201ENST00000216038 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
RTCB-201ENST00000216038 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
RTCB-201ENST00000216038 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
RTCB-201ENST00000216038 NESP48681 1621 aa17.14■□□□□ 0.33
RTCB-201ENST00000216038 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
RTCB-201ENST00000216038 CFTRP13569 1480 aa17.1■□□□□ 0.33
RTCB-201ENST00000216038 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
RTCB-201ENST00000216038 PRDM2Q13029 1718 aa17■□□□□ 0.31
RTCB-201ENST00000216038 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
RTCB-201ENST00000216038 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
RTCB-201ENST00000216038 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
RTCB-201ENST00000216038 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
RTCB-201ENST00000216038 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
RTCB-201ENST00000216038 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
RTCB-201ENST00000216038 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
RTCB-201ENST00000216038 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
RTCB-201ENST00000216038 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
RTCB-201ENST00000216038 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
RTCB-201ENST00000216038 CUX1P39880 1505 aa16.78■□□□□ 0.28
RTCB-201ENST00000216038 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
RTCB-201ENST00000216038 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
RTCB-201ENST00000216038 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
RTCB-201ENST00000216038 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
RTCB-201ENST00000216038 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
RTCB-201ENST00000216038 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
RTCB-201ENST00000216038 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
RTCB-201ENST00000216038 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
RTCB-201ENST00000216038 WDR62O43379 1518 aa16.64■□□□□ 0.25
RTCB-201ENST00000216038 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
RTCB-201ENST00000216038 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
RTCB-201ENST00000216038 SOGA1O94964 1423 aa16.56■□□□□ 0.24
RTCB-201ENST00000216038 FAM9AQ8IZU1 332 aaPredicted RBP16.55■□□□□ 0.24
RTCB-201ENST00000216038 CUX2O14529 1486 aa16.55■□□□□ 0.24
RTCB-201ENST00000216038 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
RTCB-201ENST00000216038 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
RTCB-201ENST00000216038 TDRD9Q8NDG6 1382 aaKnown RBP16.46■□□□□ 0.23
RTCB-201ENST00000216038 ABCA10Q8WWZ4 1543 aa16.46■□□□□ 0.23
RTCB-201ENST00000216038 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
RTCB-201ENST00000216038 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
RTCB-201ENST00000216038 ZNF608Q9ULD9 1512 aaPredicted RBP16.44■□□□□ 0.22
RTCB-201ENST00000216038 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
RTCB-201ENST00000216038 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.222e-7■■■■□ 20.7
RTCB-201ENST00000216038 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
RTCB-201ENST00000216038 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
RTCB-201ENST00000216038 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
RTCB-201ENST00000216038 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
RTCB-201ENST00000216038 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
RTCB-201ENST00000216038 EEA1Q15075 1411 aa16.34■□□□□ 0.21
RTCB-201ENST00000216038 IGF1RP08069 1367 aa16.32■□□□□ 0.2
RTCB-201ENST00000216038 PBRM1Q86U86 1689 aa16.31■□□□□ 0.2
RTCB-201ENST00000216038 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
RTCB-201ENST00000216038 GRIN2BQ13224 1484 aa16.27■□□□□ 0.2
RTCB-201ENST00000216038 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
RTCB-201ENST00000216038 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
RTCB-201ENST00000216038 CARMIL1Q5VZK9 1371 aa16.23■□□□□ 0.19
RTCB-201ENST00000216038 PRXQ9BXM0 1461 aa16.21■□□□□ 0.19
RTCB-201ENST00000216038 RAPGEF2Q9Y4G8 1499 aa16.21■□□□□ 0.19
RTCB-201ENST00000216038 CUL7Q14999 1698 aa16.2■□□□□ 0.18
RTCB-201ENST00000216038 FBLN2P98095 1184 aa16.19■□□□□ 0.18
RTCB-201ENST00000216038 KIF21BO75037 1637 aa16.18■□□□□ 0.18
RTCB-201ENST00000216038 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
RTCB-201ENST00000216038 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
RTCB-201ENST00000216038 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
RTCB-201ENST00000216038 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
RTCB-201ENST00000216038 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
RTCB-201ENST00000216038 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
RTCB-201ENST00000216038 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
RTCB-201ENST00000216038 CHD1O14646 1710 aa16.09■□□□□ 0.17
RTCB-201ENST00000216038 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
RTCB-201ENST00000216038 GRIN2AQ12879 1464 aa16.08■□□□□ 0.17
RTCB-201ENST00000216038 TNIKQ9UKE5 1360 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms