RNA–Protein interactions for RNA: ENST00000201943.10

CACNB4-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-201ENST00000201943 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
CACNB4-201ENST00000201943 ABCC9O60706 1549 aa27.72■■■□□ 2.03
CACNB4-201ENST00000201943 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
CACNB4-201ENST00000201943 DNAJC5BQ9UF47 199 aa26.33■■□□□ 1.8
CACNB4-201ENST00000201943 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
CACNB4-201ENST00000201943 NACADO15069 1562 aa26.04■■□□□ 1.76
CACNB4-201ENST00000201943 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
CACNB4-201ENST00000201943 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
CACNB4-201ENST00000201943 UNC13AQ9UPW8 1703 aa25.65■■□□□ 1.7
CACNB4-201ENST00000201943 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
CACNB4-201ENST00000201943 BICRAQ9NZM4 1560 aa25.53■■□□□ 1.68
CACNB4-201ENST00000201943 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
CACNB4-201ENST00000201943 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
CACNB4-201ENST00000201943 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
CACNB4-201ENST00000201943 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
CACNB4-201ENST00000201943 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
CACNB4-201ENST00000201943 SCRIBQ14160 1630 aa24.96■■□□□ 1.59
CACNB4-201ENST00000201943 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
CACNB4-201ENST00000201943 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
CACNB4-201ENST00000201943 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
CACNB4-201ENST00000201943 CUX2O14529 1486 aa24.04■■□□□ 1.44
CACNB4-201ENST00000201943 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
CACNB4-201ENST00000201943 ATAD2BQ9ULI0 1458 aa23.93■■□□□ 1.42
CACNB4-201ENST00000201943 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
CACNB4-201ENST00000201943 HMGXB3Q12766 1538 aa23.83■■□□□ 1.41
CACNB4-201ENST00000201943 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
CACNB4-201ENST00000201943 NESP48681 1621 aa23.74■■□□□ 1.39
CACNB4-201ENST00000201943 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
CACNB4-201ENST00000201943 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
CACNB4-201ENST00000201943 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
CACNB4-201ENST00000201943 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
CACNB4-201ENST00000201943 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
CACNB4-201ENST00000201943 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
CACNB4-201ENST00000201943 PDS5BQ9NTI5 1447 aa23.43■■□□□ 1.34
CACNB4-201ENST00000201943 KIF21AQ7Z4S6 1674 aa23.39■■□□□ 1.34
CACNB4-201ENST00000201943 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
CACNB4-201ENST00000201943 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
CACNB4-201ENST00000201943 WDR62O43379 1518 aa23.17■■□□□ 1.3
CACNB4-201ENST00000201943 WIZO95785 1651 aa23.14■■□□□ 1.3
CACNB4-201ENST00000201943 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
CACNB4-201ENST00000201943 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
CACNB4-201ENST00000201943 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
CACNB4-201ENST00000201943 CFTRP13569 1480 aa22.98■■□□□ 1.27
CACNB4-201ENST00000201943 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
CACNB4-201ENST00000201943 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
CACNB4-201ENST00000201943 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
CACNB4-201ENST00000201943 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
CACNB4-201ENST00000201943 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
CACNB4-201ENST00000201943 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
CACNB4-201ENST00000201943 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
CACNB4-201ENST00000201943 CCDC88BA6NC98 1476 aa22.61■■□□□ 1.21
CACNB4-201ENST00000201943 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
CACNB4-201ENST00000201943 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
CACNB4-201ENST00000201943 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
CACNB4-201ENST00000201943 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
CACNB4-201ENST00000201943 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
CACNB4-201ENST00000201943 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
CACNB4-201ENST00000201943 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
CACNB4-201ENST00000201943 DNMBPQ6XZF7 1577 aa22.44■■□□□ 1.18
CACNB4-201ENST00000201943 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.17
CACNB4-201ENST00000201943 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
CACNB4-201ENST00000201943 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
CACNB4-201ENST00000201943 CHD1O14646 1710 aa22.33■■□□□ 1.17
CACNB4-201ENST00000201943 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
CACNB4-201ENST00000201943 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
CACNB4-201ENST00000201943 FBLN2P98095 1184 aa22.26■■□□□ 1.15
CACNB4-201ENST00000201943 RAD54L2Q9Y4B4 1467 aa22.23■■□□□ 1.15
CACNB4-201ENST00000201943 SOGA1O94964 1423 aa22.21■■□□□ 1.15
CACNB4-201ENST00000201943 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
CACNB4-201ENST00000201943 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
CACNB4-201ENST00000201943 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
CACNB4-201ENST00000201943 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
CACNB4-201ENST00000201943 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
CACNB4-201ENST00000201943 CLASP1Q7Z460 1538 aa22.1■■□□□ 1.13
CACNB4-201ENST00000201943 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
CACNB4-201ENST00000201943 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
CACNB4-201ENST00000201943 CUX1P39880 1505 aa22.06■■□□□ 1.12
CACNB4-201ENST00000201943 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
CACNB4-201ENST00000201943 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
CACNB4-201ENST00000201943 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
CACNB4-201ENST00000201943 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
CACNB4-201ENST00000201943 PBRM1Q86U86 1689 aa21.89■■□□□ 1.09
CACNB4-201ENST00000201943 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
CACNB4-201ENST00000201943 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.09
CACNB4-201ENST00000201943 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
CACNB4-201ENST00000201943 GRIN2AQ12879 1464 aa21.75■■□□□ 1.07
CACNB4-201ENST00000201943 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
CACNB4-201ENST00000201943 ERCC6L2Q5T890 1561 aa21.72■■□□□ 1.07
CACNB4-201ENST00000201943 NUP160Q12769 1436 aa21.72■■□□□ 1.07
CACNB4-201ENST00000201943 ADAMTS12P58397 1594 aa21.69■■□□□ 1.06
CACNB4-201ENST00000201943 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
CACNB4-201ENST00000201943 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
CACNB4-201ENST00000201943 SHROOM2Q13796 1616 aa21.63■■□□□ 1.05
CACNB4-201ENST00000201943 TOP2BQ02880 1626 aa21.62■■□□□ 1.05
CACNB4-201ENST00000201943 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
CACNB4-201ENST00000201943 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
CACNB4-201ENST00000201943 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.05
CACNB4-201ENST00000201943 PRG4Q92954 1404 aaPredicted RBP21.51■■□□□ 1.03
CACNB4-201ENST00000201943 JPH4Q96JJ6 628 aa21.5■■□□□ 1.03
CACNB4-201ENST00000201943 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms