RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
GPATCH1-201ENST00000170564 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
GPATCH1-201ENST00000170564 ZCCHC6Q5VYS8 1495 aaKnown RBP21.1■□□□□ 0.97
GPATCH1-201ENST00000170564 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
GPATCH1-201ENST00000170564 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
GPATCH1-201ENST00000170564 DCAF8L2P0C7V8 631 aa20.6■□□□□ 0.89
GPATCH1-201ENST00000170564 ABCC9O60706 1549 aa20.41■□□□□ 0.86
GPATCH1-201ENST00000170564 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
GPATCH1-201ENST00000170564 NACADO15069 1562 aa20.1■□□□□ 0.81
GPATCH1-201ENST00000170564 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
GPATCH1-201ENST00000170564 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
GPATCH1-201ENST00000170564 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.77
GPATCH1-201ENST00000170564 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
GPATCH1-201ENST00000170564 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
GPATCH1-201ENST00000170564 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
GPATCH1-201ENST00000170564 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
GPATCH1-201ENST00000170564 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
GPATCH1-201ENST00000170564 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
GPATCH1-201ENST00000170564 WIZO95785 1651 aa19.32■□□□□ 0.68
GPATCH1-201ENST00000170564 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
GPATCH1-201ENST00000170564 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
GPATCH1-201ENST00000170564 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
GPATCH1-201ENST00000170564 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
GPATCH1-201ENST00000170564 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
GPATCH1-201ENST00000170564 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
GPATCH1-201ENST00000170564 SMARCA2P51531 1590 aa18.9■□□□□ 0.62
GPATCH1-201ENST00000170564 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
GPATCH1-201ENST00000170564 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
GPATCH1-201ENST00000170564 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
GPATCH1-201ENST00000170564 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
GPATCH1-201ENST00000170564 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
GPATCH1-201ENST00000170564 NCAPD3P42695 1498 aa18.6■□□□□ 0.57
GPATCH1-201ENST00000170564 HMGXB3Q12766 1538 aa18.58■□□□□ 0.57
GPATCH1-201ENST00000170564 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
GPATCH1-201ENST00000170564 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
GPATCH1-201ENST00000170564 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
GPATCH1-201ENST00000170564 HRCP23327 699 aa18.37■□□□□ 0.53
GPATCH1-201ENST00000170564 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
GPATCH1-201ENST00000170564 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
GPATCH1-201ENST00000170564 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
GPATCH1-201ENST00000170564 SOGA1O94964 1423 aa18.29■□□□□ 0.52
GPATCH1-201ENST00000170564 CFTRP13569 1480 aa18.28■□□□□ 0.52
GPATCH1-201ENST00000170564 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
GPATCH1-201ENST00000170564 PPARGC1BQ86YN6 1023 aaKnown RBP18.24■□□□□ 0.51
GPATCH1-201ENST00000170564 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
GPATCH1-201ENST00000170564 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
GPATCH1-201ENST00000170564 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
GPATCH1-201ENST00000170564 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
GPATCH1-201ENST00000170564 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
GPATCH1-201ENST00000170564 CUX1P39880 1505 aa18.15■□□□□ 0.5
GPATCH1-201ENST00000170564 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
GPATCH1-201ENST00000170564 NESP48681 1621 aa18.07■□□□□ 0.48
GPATCH1-201ENST00000170564 EEA1Q15075 1411 aa18.05■□□□□ 0.48
GPATCH1-201ENST00000170564 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
GPATCH1-201ENST00000170564 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
GPATCH1-201ENST00000170564 KIF21BO75037 1637 aa17.93■□□□□ 0.46
GPATCH1-201ENST00000170564 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
GPATCH1-201ENST00000170564 GOLGA3Q08378 1498 aa17.89■□□□□ 0.46
GPATCH1-201ENST00000170564 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
GPATCH1-201ENST00000170564 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
GPATCH1-201ENST00000170564 CEP162Q5TB80 1403 aa17.88■□□□□ 0.45
GPATCH1-201ENST00000170564 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
GPATCH1-201ENST00000170564 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
GPATCH1-201ENST00000170564 KIF21AQ7Z4S6 1674 aa17.82■□□□□ 0.44
GPATCH1-201ENST00000170564 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
GPATCH1-201ENST00000170564 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
GPATCH1-201ENST00000170564 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
GPATCH1-201ENST00000170564 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
GPATCH1-201ENST00000170564 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
GPATCH1-201ENST00000170564 KIF27Q86VH2 1401 aa17.78■□□□□ 0.44
GPATCH1-201ENST00000170564 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.43
GPATCH1-201ENST00000170564 CUX2O14529 1486 aa17.76■□□□□ 0.43
GPATCH1-201ENST00000170564 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
GPATCH1-201ENST00000170564 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
GPATCH1-201ENST00000170564 IGF1RP08069 1367 aa17.71■□□□□ 0.43
GPATCH1-201ENST00000170564 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
GPATCH1-201ENST00000170564 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
GPATCH1-201ENST00000170564 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
GPATCH1-201ENST00000170564 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
GPATCH1-201ENST00000170564 CLIP1P30622 1438 aa17.65■□□□□ 0.42
GPATCH1-201ENST00000170564 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.41
GPATCH1-201ENST00000170564 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
GPATCH1-201ENST00000170564 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
GPATCH1-201ENST00000170564 CARMIL1Q5VZK9 1371 aa17.56■□□□□ 0.4
GPATCH1-201ENST00000170564 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
GPATCH1-201ENST00000170564 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
GPATCH1-201ENST00000170564 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
GPATCH1-201ENST00000170564 VPS8Q8N3P4 1428 aa17.52■□□□□ 0.4
GPATCH1-201ENST00000170564 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
GPATCH1-201ENST00000170564 ARHGAP35Q9NRY4 1499 aa17.48■□□□□ 0.39
GPATCH1-201ENST00000170564 CUL7Q14999 1698 aa17.48■□□□□ 0.39
GPATCH1-201ENST00000170564 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
GPATCH1-201ENST00000170564 WDR62O43379 1518 aa17.48■□□□□ 0.39
GPATCH1-201ENST00000170564 GAPVD1Q14C86 1478 aa17.46■□□□□ 0.39
GPATCH1-201ENST00000170564 THOC2Q8NI27 1593 aaKnown RBP17.44■□□□□ 0.38
GPATCH1-201ENST00000170564 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
GPATCH1-201ENST00000170564 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■■□ 24.2
GPATCH1-201ENST00000170564 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
GPATCH1-201ENST00000170564 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
GPATCH1-201ENST00000170564 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms