RNA–Protein interactions for RNA: ENST00000165086.8

NPIPB4-201, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 464 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-201ENST00000165086 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
NPIPB4-201ENST00000165086 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
NPIPB4-201ENST00000165086 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
NPIPB4-201ENST00000165086 ABCC9O60706 1549 aa18.63■□□□□ 0.57
NPIPB4-201ENST00000165086 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
NPIPB4-201ENST00000165086 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
NPIPB4-201ENST00000165086 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
NPIPB4-201ENST00000165086 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
NPIPB4-201ENST00000165086 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.39
NPIPB4-201ENST00000165086 NACADO15069 1562 aa17.27■□□□□ 0.35
NPIPB4-201ENST00000165086 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
NPIPB4-201ENST00000165086 FOXD1Q16676 465 aa17.17■□□□□ 0.34
NPIPB4-201ENST00000165086 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
NPIPB4-201ENST00000165086 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
NPIPB4-201ENST00000165086 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
NPIPB4-201ENST00000165086 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
NPIPB4-201ENST00000165086 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
NPIPB4-201ENST00000165086 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
NPIPB4-201ENST00000165086 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
NPIPB4-201ENST00000165086 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
NPIPB4-201ENST00000165086 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
NPIPB4-201ENST00000165086 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
NPIPB4-201ENST00000165086 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
NPIPB4-201ENST00000165086 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
NPIPB4-201ENST00000165086 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
NPIPB4-201ENST00000165086 CUX2O14529 1486 aa16.29■□□□□ 0.2
NPIPB4-201ENST00000165086 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
NPIPB4-201ENST00000165086 ADRA2BP18089 450 aa16.2■□□□□ 0.18
NPIPB4-201ENST00000165086 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
NPIPB4-201ENST00000165086 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
NPIPB4-201ENST00000165086 MSH5O43196 834 aa15.97■□□□□ 0.15
NPIPB4-201ENST00000165086 NCAPD3P42695 1498 aa15.93■□□□□ 0.14
NPIPB4-201ENST00000165086 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
NPIPB4-201ENST00000165086 NESP48681 1621 aa15.86■□□□□ 0.13
NPIPB4-201ENST00000165086 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
NPIPB4-201ENST00000165086 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
NPIPB4-201ENST00000165086 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
NPIPB4-201ENST00000165086 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
NPIPB4-201ENST00000165086 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
NPIPB4-201ENST00000165086 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
NPIPB4-201ENST00000165086 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
NPIPB4-201ENST00000165086 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
NPIPB4-201ENST00000165086 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
NPIPB4-201ENST00000165086 PEG3Q9GZU2 1588 aa15.56■□□□□ 0.08
NPIPB4-201ENST00000165086 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
NPIPB4-201ENST00000165086 WDR62O43379 1518 aa15.52■□□□□ 0.07
NPIPB4-201ENST00000165086 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
NPIPB4-201ENST00000165086 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
NPIPB4-201ENST00000165086 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
NPIPB4-201ENST00000165086 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
NPIPB4-201ENST00000165086 RIMBP3CA6NJZ7 1639 aa15.34■□□□□ 0.05
NPIPB4-201ENST00000165086 RIMBP3BA6NNM3 1639 aa15.34■□□□□ 0.05
NPIPB4-201ENST00000165086 RIMBP3Q9UFD9 1639 aa15.34■□□□□ 0.05
NPIPB4-201ENST00000165086 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
NPIPB4-201ENST00000165086 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
NPIPB4-201ENST00000165086 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
NPIPB4-201ENST00000165086 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
NPIPB4-201ENST00000165086 WIZO95785 1651 aa15.16■□□□□ 0.02
NPIPB4-201ENST00000165086 CFTRP13569 1480 aa15.14■□□□□ 0.01
NPIPB4-201ENST00000165086 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
NPIPB4-201ENST00000165086 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
NPIPB4-201ENST00000165086 ARAP1Q96P48 1450 aa15.05■□□□□ -0
NPIPB4-201ENST00000165086 IFT140Q96RY7 1462 aa15.04■□□□□ -0
NPIPB4-201ENST00000165086 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
NPIPB4-201ENST00000165086 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
NPIPB4-201ENST00000165086 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
NPIPB4-201ENST00000165086 PRDM2Q13029 1718 aa15□□□□□ -0.01
NPIPB4-201ENST00000165086 CHD1O14646 1710 aa14.98□□□□□ -0.01
NPIPB4-201ENST00000165086 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
NPIPB4-201ENST00000165086 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
NPIPB4-201ENST00000165086 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
NPIPB4-201ENST00000165086 TARBP1Q13395 1621 aaKnown RBP14.85□□□□□ -0.03
NPIPB4-201ENST00000165086 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
NPIPB4-201ENST00000165086 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.03
NPIPB4-201ENST00000165086 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
NPIPB4-201ENST00000165086 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
NPIPB4-201ENST00000165086 MAPK8IP2Q13387 824 aaPredicted RBP14.81□□□□□ -0.04
NPIPB4-201ENST00000165086 CLASP1Q7Z460 1538 aa14.81□□□□□ -0.04
NPIPB4-201ENST00000165086 FBLN2P98095 1184 aa14.77□□□□□ -0.05
NPIPB4-201ENST00000165086 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
NPIPB4-201ENST00000165086 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
NPIPB4-201ENST00000165086 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
NPIPB4-201ENST00000165086 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
NPIPB4-201ENST00000165086 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
NPIPB4-201ENST00000165086 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
NPIPB4-201ENST00000165086 WDR97A6NE52 1622 aa14.67□□□□□ -0.06
NPIPB4-201ENST00000165086 RAD54L2Q9Y4B4 1467 aa14.66□□□□□ -0.06
NPIPB4-201ENST00000165086 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
NPIPB4-201ENST00000165086 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
NPIPB4-201ENST00000165086 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
NPIPB4-201ENST00000165086 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
NPIPB4-201ENST00000165086 SOGA1O94964 1423 aa14.59□□□□□ -0.07
NPIPB4-201ENST00000165086 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
NPIPB4-201ENST00000165086 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
NPIPB4-201ENST00000165086 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
NPIPB4-201ENST00000165086 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
NPIPB4-201ENST00000165086 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.08
NPIPB4-201ENST00000165086 KIF13AQ9H1H9 1805 aa14.5□□□□□ -0.09
NPIPB4-201ENST00000165086 CUX1P39880 1505 aa14.47□□□□□ -0.09
NPIPB4-201ENST00000165086 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms