RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
MSS18	YPR134W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
MSS18	YPR134W	SRO9	P25567	434 aa	Known RBP	4.63	□□□□□ -1.67
MSS18	YPR134W	SSF1	P38789	453 aa	Predicted RBP	4.63	□□□□□ -1.67
MSS18	YPR134W	NMD3	P38861	518 aa	Known RBP	4.63	□□□□□ -1.67
MSS18	YPR134W	XKS1	P42826	600 aa		4.63	□□□□□ -1.67
MSS18	YPR134W	VPS53	P47061	822 aa		4.63	□□□□□ -1.67
MSS18	YPR134W	ENV11	P53246	860 aa		4.63	□□□□□ -1.67
MSS18	YPR134W	RSA3	Q05942	220 aa	Known RBP	4.63	□□□□□ -1.67
MSS18	YPR134W	CDA2	Q06703	312 aa		4.63	□□□□□ -1.67
MSS18	YPR134W	LPX1	Q12405	387 aa	Known RBP	4.63	□□□□□ -1.67
MSS18	YPR134W	PHO4	P07270	312 aa	Known RBP	4.62	□□□□□ -1.67
MSS18	YPR134W	TSA1	P34760	196 aa	Known RBP	4.62	□□□□□ -1.67
MSS18	YPR134W	YKL222C	P35995	705 aa		4.62	□□□□□ -1.67
MSS18	YPR134W	GTS1	P40956	396 aa		4.62	□□□□□ -1.67
MSS18	YPR134W	DAL4	Q04895	635 aa		4.62	□□□□□ -1.67
MSS18	YPR134W	NBA1	Q08229	501 aa	Known RBP	4.62	□□□□□ -1.67
MSS18	YPR134W	PRP6	P19735	899 aa	Predicted RBP	4.61	□□□□□ -1.67
MSS18	YPR134W	SEC20	P28791	383 aa		4.61	□□□□□ -1.67
MSS18	YPR134W	ULP1	Q02724	621 aa		4.61	□□□□□ -1.67
MSS18	YPR134W	TAF13	P11747	167 aa		4.6	□□□□□ -1.67
MSS18	YPR134W	SAM35	P14693	329 aa		4.6	□□□□□ -1.67
MSS18	YPR134W	YCR015C	P25616	317 aa		4.6	□□□□□ -1.67
MSS18	YPR134W	ADD66	P36040	267 aa		4.6	□□□□□ -1.67
MSS18	YPR134W	PEX28	P38848	579 aa		4.6	□□□□□ -1.67
MSS18	YPR134W	MRPL22	P53881	309 aa		4.6	□□□□□ -1.67
MSS18	YPR134W	ADI1	Q03677	179 aa		4.6	□□□□□ -1.67
MSS18	YPR134W	MSC6	Q08818	692 aa	Known RBP	4.6	□□□□□ -1.67
MSS18	YPR134W	QNS1	P38795	714 aa	Known RBP	4.59	□□□□□ -1.67
MSS18	YPR134W	DAK2	P43550	591 aa		4.59	□□□□□ -1.67
MSS18	YPR134W	ESC8	Q08119	714 aa		4.59	□□□□□ -1.67
MSS18	YPR134W	COQ4	O13525	335 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	THI12	P42883	340 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	THI5	P43534	340 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	THI11	P47183	340 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	RIM8	P53179	542 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	YNR063W	P53749	607 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	SNO2	P53823	222 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	THI13	Q07748	340 aa		4.58	□□□□□ -1.68
MSS18	YPR134W	MET4	P32389	672 aa		4.57	□□□□□ -1.68
MSS18	YPR134W	UGA4	P32837	571 aa		4.57	□□□□□ -1.68
MSS18	YPR134W	RDH54	P38086	958 aa		4.57	□□□□□ -1.68
MSS18	YPR134W	CCZ1	P38273	704 aa		4.57	□□□□□ -1.68
MSS18	YPR134W	YGL140C	P53120	1219 aa		4.57	□□□□□ -1.68
MSS18	YPR134W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
MSS18	YPR134W	YPL109C	Q02981	657 aa		4.57	□□□□□ -1.68
MSS18	YPR134W	SOD2	P00447	233 aa		4.56	□□□□□ -1.68
MSS18	YPR134W	SEC23	P15303	768 aa	Known RBP	4.56	□□□□□ -1.68
MSS18	YPR134W	AIM26	P32858	118 aa		4.56	□□□□□ -1.68
MSS18	YPR134W	SLD2	P34252	453 aa		4.56	□□□□□ -1.68
MSS18	YPR134W	THI80	P35202	319 aa		4.56	□□□□□ -1.68
MSS18	YPR134W	YJL045W	P47052	634 aa		4.56	□□□□□ -1.68
MSS18	YPR134W	EST2	Q06163	884 aa		4.56	□□□□□ -1.68
MSS18	YPR134W	YOR352W	Q08816	343 aa		4.56	□□□□□ -1.68
MSS18	YPR134W	SPS1	P08458	490 aa		4.55	□□□□□ -1.68
MSS18	YPR134W	YSC84	P32793	468 aa		4.55	□□□□□ -1.68
MSS18	YPR134W	AIM3	P38266	947 aa	Known RBP	4.55	□□□□□ -1.68
MSS18	YPR134W	ETP1	P38748	585 aa	Known RBP	4.55	□□□□□ -1.68
MSS18	YPR134W	HNT2	P49775	206 aa		4.55	□□□□□ -1.68
MSS18	YPR134W	MCD1	Q12158	566 aa		4.55	□□□□□ -1.68
MSS18	YPR134W	TAF1	P46677	1066 aa		4.54	□□□□□ -1.68
MSS18	YPR134W	ENT3	P47160	408 aa		4.54	□□□□□ -1.68
MSS18	YPR134W	RSC58	Q07979	502 aa		4.54	□□□□□ -1.68
MSS18	YPR134W	YDL177C	Q12257	170 aa		4.54	□□□□□ -1.68
MSS18	YPR134W	HXK1	P04806	485 aa	Known RBP	4.53	□□□□□ -1.68
MSS18	YPR134W	RPT1	P33299	467 aa	Known RBP	4.53	□□□□□ -1.68
MSS18	YPR134W	GIP4	P39732	760 aa		4.53	□□□□□ -1.68
MSS18	YPR134W	RPN3	P40016	523 aa	Known RBP	4.53	□□□□□ -1.68
MSS18	YPR134W	TNA1	P53322	534 aa		4.53	□□□□□ -1.68
MSS18	YPR134W	YPL260W	Q08977	551 aa		4.53	□□□□□ -1.68
MSS18	YPR134W	PTC5	Q12511	572 aa		4.53	□□□□□ -1.68
MSS18	YPR134W	RPS13	P05756	151 aa	Known RBP	4.52	□□□□□ -1.69
MSS18	YPR134W	PRE9	P23638	258 aa	Known RBP	4.52	□□□□□ -1.69
MSS18	YPR134W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
MSS18	YPR134W	KIP1	P28742	1111 aa		4.52	□□□□□ -1.69
MSS18	YPR134W	MRPS18	P42847	217 aa		4.52	□□□□□ -1.69
MSS18	YPR134W	YGR122W	P53272	402 aa		4.52	□□□□□ -1.69
MSS18	YPR134W	HOS3	Q02959	697 aa	Known RBP	4.52	□□□□□ -1.69
MSS18	YPR134W	HDA2	Q06629	674 aa		4.52	□□□□□ -1.69
MSS18	YPR134W	RSB1	Q08417	382 aa		4.52	□□□□□ -1.69
MSS18	YPR134W	WHI5	Q12416	295 aa		4.52	□□□□□ -1.69
MSS18	YPR134W	YLR358C	O13565	187 aa		4.51	□□□□□ -1.69
MSS18	YPR134W	BAP2	P38084	609 aa		4.51	□□□□□ -1.69
MSS18	YPR134W	FLR1	P38124	548 aa		4.51	□□□□□ -1.69
MSS18	YPR134W	FAA3	P39002	694 aa		4.51	□□□□□ -1.69
MSS18	YPR134W	PIK1	P39104	1066 aa		4.51	□□□□□ -1.69
MSS18	YPR134W	SEC26	P41810	973 aa	Known RBP	4.51	□□□□□ -1.69
MSS18	YPR134W	TOS4	Q06266	489 aa		4.5	□□□□□ -1.69
MSS18	YPR134W	TOD6	P34219	525 aa		4.49	□□□□□ -1.69
MSS18	YPR134W	ALG3	P38179	458 aa		4.49	□□□□□ -1.69
MSS18	YPR134W	MGE1	P38523	228 aa		4.49	□□□□□ -1.69
MSS18	YPR134W	GSF2	Q04697	403 aa	Known RBP	4.49	□□□□□ -1.69
MSS18	YPR134W	SGD1	Q06132	899 aa		4.49	□□□□□ -1.69
MSS18	YPR134W	YPL277C	Q08989	487 aa		4.49	□□□□□ -1.69
MSS18	YPR134W	DED1	P06634	604 aa	Known RBP	4.48	□□□□□ -1.69
MSS18	YPR134W	HEM13	P11353	328 aa	Known RBP	4.48	□□□□□ -1.69
MSS18	YPR134W	AFG2	P32794	780 aa		4.48	□□□□□ -1.69
MSS18	YPR134W	PIC2	P40035	300 aa		4.48	□□□□□ -1.69
MSS18	YPR134W	SIW14	P53965	281 aa		4.48	□□□□□ -1.69
MSS18	YPR134W	SPO21	Q12411	609 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 950.8 ms