RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C CST9Q06032 482 aa6.65□□□□□ -1.34
UBC11YOR339C VIP1Q06685 1146 aaKnown RBP6.65□□□□□ -1.34
UBC11YOR339C SAM1P10659 382 aaKnown RBP6.64□□□□□ -1.35
UBC11YOR339C RPL8AP17076 256 aaKnown RBP6.64□□□□□ -1.35
UBC11YOR339C MBR1P23493 339 aa6.64□□□□□ -1.35
UBC11YOR339C RDS1P25611 832 aa6.64□□□□□ -1.35
UBC11YOR339C IXR1P33417 597 aa6.64□□□□□ -1.35
UBC11YOR339C ASH1P34233 588 aa6.64□□□□□ -1.35
UBC11YOR339C APE3P37302 537 aaKnown RBP6.64□□□□□ -1.35
UBC11YOR339C PHO88P38264 188 aaPredicted RBP6.64□□□□□ -1.35
UBC11YOR339C CCT3P39077 534 aaKnown RBP6.64□□□□□ -1.35
UBC11YOR339C BDH2P39713 417 aa6.64□□□□□ -1.35
UBC11YOR339C YGL138CP53122 345 aa6.64□□□□□ -1.35
UBC11YOR339C LSB1P53281 241 aa6.64□□□□□ -1.35
UBC11YOR339C SMD2Q06217 110 aaKnown RBP6.64□□□□□ -1.35
UBC11YOR339C CFT2Q12102 859 aaPredicted RBP6.64□□□□□ -1.35
UBC11YOR339C DCS2Q12123 353 aa6.64□□□□□ -1.35
UBC11YOR339C MAK11P20484 414 aaKnown RBP6.63□□□□□ -1.35
UBC11YOR339C SEC20P28791 383 aa6.63□□□□□ -1.35
UBC11YOR339C TGL1P34163 548 aa6.63□□□□□ -1.35
UBC11YOR339C TPM2P40414 161 aa6.63□□□□□ -1.35
UBC11YOR339C FMS1P50264 508 aa6.63□□□□□ -1.35
UBC11YOR339C PIL1P53252 339 aaKnown RBP6.63□□□□□ -1.35
UBC11YOR339C NAF1P53919 492 aaKnown RBP6.63□□□□□ -1.35
UBC11YOR339C TMA64Q04600 565 aaKnown RBP6.63□□□□□ -1.35
UBC11YOR339C GET3Q12154 354 aaKnown RBP6.63□□□□□ -1.35
UBC11YOR339C PHR1P05066 565 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
UBC11YOR339C PGI1P12709 554 aaKnown RBP6.62□□□□□ -1.35
UBC11YOR339C VMA2P16140 517 aaKnown RBP6.62□□□□□ -1.35
UBC11YOR339C MOT2P34909 587 aaKnown RBP6.62□□□□□ -1.35
UBC11YOR339C ERG7P38604 731 aa6.62□□□□□ -1.35
UBC11YOR339C HST1P53685 503 aa6.62□□□□□ -1.35
UBC11YOR339C ALD6P54115 500 aaKnown RBP6.62□□□□□ -1.35
UBC11YOR339C CSC1Q06538 782 aa6.62□□□□□ -1.35
UBC11YOR339C PEX19Q07418 342 aa6.62□□□□□ -1.35
UBC11YOR339C CEX1Q12453 761 aa6.62□□□□□ -1.35
UBC11YOR339C TIF6Q12522 245 aaKnown RBP6.62□□□□□ -1.35
UBC11YOR339C FKS1P38631 1876 aaKnown RBP6.62□□□□□ -1.35
UBC11YOR339C PWP2P25635 923 aaKnown RBP6.61□□□□□ -1.35
UBC11YOR339C CDC60P26637 1090 aaKnown RBP6.61□□□□□ -1.35
UBC11YOR339C ASF1P32447 279 aa6.61□□□□□ -1.35
UBC11YOR339C UTR4P32626 227 aa6.61□□□□□ -1.35
UBC11YOR339C SHP1P34223 423 aa6.61□□□□□ -1.35
UBC11YOR339C RSC30P38781 883 aa6.61□□□□□ -1.35
UBC11YOR339C PAN5P38787 379 aa6.61□□□□□ -1.35
UBC11YOR339C SPR3P41901 512 aa6.61□□□□□ -1.35
UBC11YOR339C DUS1P53759 423 aaKnown RBP6.61□□□□□ -1.35
UBC11YOR339C OXR1Q08952 273 aa6.61□□□□□ -1.35
UBC11YOR339C THR4P16120 514 aaKnown RBP6.6□□□□□ -1.35
UBC11YOR339C RGP1P16664 663 aa6.6□□□□□ -1.35
UBC11YOR339C SAS3P34218 831 aa6.6□□□□□ -1.35
UBC11YOR339C YKR018CP36114 725 aa6.6□□□□□ -1.35
UBC11YOR339C SUL1P38359 859 aa6.6□□□□□ -1.35
UBC11YOR339C GPB2P39717 880 aa6.6□□□□□ -1.35
UBC11YOR339C HYR1P40581 163 aaKnown RBP6.6□□□□□ -1.35
UBC11YOR339C CIR1P42940 261 aa6.6□□□□□ -1.35
UBC11YOR339C CIT3P43635 486 aa6.6□□□□□ -1.35
UBC11YOR339C YGR273CP53329 174 aa6.6□□□□□ -1.35
UBC11YOR339C RET3P53600 189 aa6.6□□□□□ -1.35
UBC11YOR339C BNI5P53890 448 aaKnown RBP6.6□□□□□ -1.35
UBC11YOR339C HAP5Q02516 242 aa6.6□□□□□ -1.35
UBC11YOR339C TRS120Q04183 1289 aa6.6□□□□□ -1.35
UBC11YOR339C EIS1Q05050 843 aaKnown RBP6.6□□□□□ -1.35
UBC11YOR339C DUS3Q06053 668 aaKnown RBP6.6□□□□□ -1.35
UBC11YOR339C SPH1Q06160 661 aa6.6□□□□□ -1.35
UBC11YOR339C RKM4Q12504 494 aa6.6□□□□□ -1.35
UBC11YOR339C PTC5Q12511 572 aa6.6□□□□□ -1.35
UBC11YOR339C NBL1Q3E7Y6 73 aa6.6□□□□□ -1.35
UBC11YOR339C HXK1P04806 485 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C FRS2P15625 503 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C PKC1P24583 1151 aa6.59□□□□□ -1.35
UBC11YOR339C URA1P28272 314 aaPredicted RBP6.59□□□□□ -1.35
UBC11YOR339C MSP1P28737 362 aa6.59□□□□□ -1.35
UBC11YOR339C EUG1P32474 517 aa6.59□□□□□ -1.35
UBC11YOR339C UGA4P32837 571 aa6.59□□□□□ -1.35
UBC11YOR339C MCR1P36060 302 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C STT3P39007 718 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C RRD1P40454 393 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C LIF1P53150 421 aa6.59□□□□□ -1.35
UBC11YOR339C DSE4P53753 1117 aa6.59□□□□□ -1.35
UBC11YOR339C EAF7P53911 425 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C CSM3Q04659 317 aa6.59□□□□□ -1.35
UBC11YOR339C YLR326WQ06170 240 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C GUD1Q07729 489 aa6.59□□□□□ -1.35
UBC11YOR339C SLK19Q08581 821 aaKnown RBP6.59□□□□□ -1.35
UBC11YOR339C YOR296WQ08748 1289 aa6.59□□□□□ -1.35
UBC11YOR339C TIP41Q12199 356 aa6.59□□□□□ -1.35
UBC11YOR339C ECM29P38737 1868 aa6.59□□□□□ -1.35
UBC11YOR339C KEX1P09620 729 aa6.58□□□□□ -1.36
UBC11YOR339C MGA2P40578 1113 aa6.58□□□□□ -1.36
UBC11YOR339C CTR1P49573 406 aa6.58□□□□□ -1.36
UBC11YOR339C FAR11P53917 953 aa6.58□□□□□ -1.36
UBC11YOR339C YAF9P53930 226 aa6.58□□□□□ -1.36
UBC11YOR339C AIM33Q04516 312 aa6.58□□□□□ -1.36
UBC11YOR339C DUS4Q06063 367 aa6.58□□□□□ -1.36
UBC11YOR339C SGD1Q06132 899 aa6.58□□□□□ -1.36
UBC11YOR339C APC11Q12157 165 aa6.58□□□□□ -1.36
UBC11YOR339C TY3A-GQ12173 290 aa6.58□□□□□ -1.36
UBC11YOR339C ARP6Q12509 438 aa6.58□□□□□ -1.36
UBC11YOR339C TY3A-IQ99219 290 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms