RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	MDM1	Q01846	1127 aa		6.1	□□□□□ -1.43
GEP3	YOR205C	ERG12	P07277	443 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	MAK11	P20484	414 aa	Known RBP	6.09	□□□□□ -1.43
GEP3	YOR205C	PWP2	P25635	923 aa	Known RBP	6.09	□□□□□ -1.43
GEP3	YOR205C	RPN12	P32496	274 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	ELM1	P32801	640 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	DID4	P36108	232 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	ACA1	P39970	489 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	VHR2	P40041	505 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	CWC15	Q03772	175 aa	Known RBP	6.09	□□□□□ -1.43
GEP3	YOR205C	GIS4	Q04233	774 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	VIP1	Q06685	1146 aa	Known RBP	6.09	□□□□□ -1.43
GEP3	YOR205C	DSE3	Q08729	430 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	TIP41	Q12199	356 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	CSR2	Q12734	1121 aa		6.09	□□□□□ -1.43
GEP3	YOR205C	TUS1	Q06412	1307 aa		6.09	□□□□□ -1.44
GEP3	YOR205C	CDC6	P09119	513 aa		6.08	□□□□□ -1.44
GEP3	YOR205C	FRS2	P15625	503 aa	Known RBP	6.08	□□□□□ -1.44
GEP3	YOR205C	RPL8A	P17076	256 aa	Known RBP	6.08	□□□□□ -1.44
GEP3	YOR205C	SAM2	P19358	384 aa	Known RBP	6.08	□□□□□ -1.44
GEP3	YOR205C	SMD2	Q06217	110 aa	Known RBP	6.08	□□□□□ -1.44
GEP3	YOR205C	PUS5	Q06244	254 aa		6.08	□□□□□ -1.44
GEP3	YOR205C	DCS2	Q12123	353 aa		6.08	□□□□□ -1.44
GEP3	YOR205C	GIN4	Q12263	1142 aa		6.08	□□□□□ -1.44
GEP3	YOR205C	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
GEP3	YOR205C	SRP54	P20424	541 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	CCT3	P39077	534 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	TIF4631	P39935	952 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	YGL138C	P53122	345 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	SOL4	P53315	255 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	RTC4	P53850	401 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	BNI5	P53890	448 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	CSM3	Q04659	317 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	PIB1	Q06651	286 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	SUB2	Q07478	446 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
GEP3	YOR205C	THR4	P16120	514 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	VPS1	P21576	704 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	MBR1	P23493	339 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	SEC61	P32915	480 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	YKT6	P36015	200 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	RFT1	P38206	574 aa	Predicted RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	TFG1	P41895	735 aa	Predicted RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	PEX21	P50091	288 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	RRT6	P53117	311 aa	Predicted RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	SGD1	Q06132	899 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	YOR296W	Q08748	1289 aa		6.07	□□□□□ -1.44
GEP3	YOR205C	DDP1	Q99321	188 aa	Known RBP	6.07	□□□□□ -1.44
GEP3	YOR205C	SPB4	P25808	606 aa	Predicted RBP	6.06	□□□□□ -1.44
GEP3	YOR205C	OCT1	P35999	772 aa		6.06	□□□□□ -1.44
GEP3	YOR205C	LEO1	P38439	464 aa		6.06	□□□□□ -1.44
GEP3	YOR205C	YER130C	P39959	443 aa		6.06	□□□□□ -1.44
GEP3	YOR205C	LYS14	P40971	790 aa		6.06	□□□□□ -1.44
GEP3	YOR205C	YNL035C	P53962	389 aa	Known RBP	6.06	□□□□□ -1.44
GEP3	YOR205C	EIS1	Q05050	843 aa	Known RBP	6.06	□□□□□ -1.44
GEP3	YOR205C	YPR148C	Q06523	435 aa		6.06	□□□□□ -1.44
GEP3	YOR205C	UTP4	Q06679	776 aa	Known RBP	6.06	□□□□□ -1.44
GEP3	YOR205C	KRS1	P15180	591 aa	Known RBP	6.05	□□□□□ -1.44
GEP3	YOR205C	YPT11	P48559	417 aa		6.05	□□□□□ -1.44
GEP3	YOR205C	ASE1	P50275	885 aa		6.05	□□□□□ -1.44
GEP3	YOR205C	RSC1	P53236	928 aa		6.05	□□□□□ -1.44
GEP3	YOR205C	DSE4	P53753	1117 aa		6.05	□□□□□ -1.44
GEP3	YOR205C	VMS1	Q04311	632 aa	Known RBP	6.05	□□□□□ -1.44
GEP3	YOR205C	TRS33	Q99394	268 aa		6.05	□□□□□ -1.44
GEP3	YOR205C	TAF13	P11747	167 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	ALG1	P16661	449 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	URA1	P28272	314 aa	Predicted RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	RKM3	P38222	552 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	NPR3	P38742	1146 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	RRM3	P38766	723 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	VAB2	P40003	282 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	RET3	P53600	189 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	PEX29	Q03370	554 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	YML037C	Q03703	340 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	TRS120	Q04183	1289 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	LCD1	Q04377	747 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	MMR1	Q06324	491 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	SUE1	Q06524	206 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	GSC2	P40989	1895 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	HIS4	P00815	799 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	RPL22A	P05749	121 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	SES1	P07284	462 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	GPA1	P08539	472 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	CHL1	P22516	861 aa	Predicted RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	GSY1	P23337	708 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	SRO9	P25567	434 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	KNS1	P32350	737 aa	Predicted RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	SAC6	P32599	642 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	FMS1	P50264	508 aa		6.04	□□□□□ -1.44
GEP3	YOR205C	CUE3	P53137	624 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	SDA1	P53313	767 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	KRE33	P53914	1056 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	SLK19	Q08581	821 aa	Known RBP	6.04	□□□□□ -1.44
GEP3	YOR205C	TUF1	P02992	437 aa	Known RBP	6.03	□□□□□ -1.44
GEP3	YOR205C	MCM3	P24279	971 aa	Known RBP	6.03	□□□□□ -1.44
GEP3	YOR205C	PER1	P25625	357 aa		6.03	□□□□□ -1.44
GEP3	YOR205C	BMH1	P29311	267 aa	Known RBP	6.03	□□□□□ -1.44
GEP3	YOR205C	MCD4	P36051	919 aa		6.03	□□□□□ -1.44
GEP3	YOR205C	YKR018C	P36114	725 aa		6.03	□□□□□ -1.44
GEP3	YOR205C	STT3	P39007	718 aa	Known RBP	6.03	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms