RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	EAF7	P53911	425 aa	Known RBP	13.18	□□□□□ -0.3
DED1	YOR204W	CSC1	Q06538	782 aa		13.18	□□□□□ -0.3
DED1	YOR204W	OXR1	Q08952	273 aa		13.18	□□□□□ -0.3
DED1	YOR204W	RGP1	P16664	663 aa		13.18	□□□□□ -0.3
DED1	YOR204W	BSD2	P38356	321 aa		13.18	□□□□□ -0.3
DED1	YOR204W	HYR1	P40581	163 aa	Known RBP	13.18	□□□□□ -0.3
DED1	YOR204W	JIP4	Q03361	876 aa		13.18	□□□□□ -0.3
DED1	YOR204W	APC11	Q12157	165 aa		13.18	□□□□□ -0.3
DED1	YOR204W	SHP1	P34223	423 aa		13.17	□□□□□ -0.3
DED1	YOR204W	MCD4	P36051	919 aa		13.17	□□□□□ -0.3
DED1	YOR204W	CTR1	P49573	406 aa		13.17	□□□□□ -0.3
DED1	YOR204W	NAF1	P53919	492 aa	Known RBP	13.17	□□□□□ -0.3
DED1	YOR204W	RBA50	Q04418	439 aa		13.17	□□□□□ -0.3
DED1	YOR204W	EIS1	Q05050	843 aa	Known RBP	13.17	□□□□□ -0.3
DED1	YOR204W	URA1	P28272	314 aa	Predicted RBP	13.16	□□□□□ -0.3
DED1	YOR204W	TGL1	P34163	548 aa		13.16	□□□□□ -0.3
DED1	YOR204W	VAB2	P40003	282 aa		13.16	□□□□□ -0.3
DED1	YOR204W	CIT3	P43635	486 aa		13.16	□□□□□ -0.3
DED1	YOR204W	NET1	P47035	1189 aa		13.16	□□□□□ -0.3
DED1	YOR204W	ROX1	P25042	368 aa		13.16	□□□□□ -0.3
DED1	YOR204W	PER1	P25625	357 aa		13.16	□□□□□ -0.3
DED1	YOR204W	ASH1	P34233	588 aa		13.16	□□□□□ -0.3
DED1	YOR204W	TPM2	P40414	161 aa		13.16	□□□□□ -0.3
DED1	YOR204W	YGR273C	P53329	174 aa		13.16	□□□□□ -0.3
DED1	YOR204W	TRS120	Q04183	1289 aa		13.16	□□□□□ -0.3
DED1	YOR204W	CFT2	Q12102	859 aa	Predicted RBP	13.16	□□□□□ -0.3
DED1	YOR204W	CEX1	Q12453	761 aa		13.16	□□□□□ -0.3
DED1	YOR204W	HXK1	P04806	485 aa	Known RBP	13.15	□□□□□ -0.3
DED1	YOR204W	MCM4	P30665	933 aa	Known RBP	13.15	□□□□□ -0.3
DED1	YOR204W	PAN5	P38787	379 aa		13.15	□□□□□ -0.3
DED1	YOR204W	DID4	P36108	232 aa		13.14	□□□□□ -0.31
DED1	YOR204W	APE3	P37302	537 aa	Known RBP	13.14	□□□□□ -0.31
DED1	YOR204W	AIM33	Q04516	312 aa		13.14	□□□□□ -0.31
DED1	YOR204W	CST9	Q06032	482 aa		13.14	□□□□□ -0.31
DED1	YOR204W	RKM4	Q12504	494 aa		13.14	□□□□□ -0.31
DED1	YOR204W	KEX1	P09620	729 aa		13.13	□□□□□ -0.31
DED1	YOR204W	UTR4	P32626	227 aa		13.13	□□□□□ -0.31
DED1	YOR204W	SUL1	P38359	859 aa		13.13	□□□□□ -0.31
DED1	YOR204W	STT3	P39007	718 aa	Known RBP	13.13	□□□□□ -0.31
DED1	YOR204W	RET3	P53600	189 aa		13.13	□□□□□ -0.31
DED1	YOR204W	DSE4	P53753	1117 aa		13.13	□□□□□ -0.31
DED1	YOR204W	BNI5	P53890	448 aa	Known RBP	13.13	□□□□□ -0.31
DED1	YOR204W	ALD6	P54115	500 aa	Known RBP	13.13	□□□□□ -0.31
DED1	YOR204W	RVS167	P39743	482 aa	Known RBP	13.13	□□□□□ -0.31
DED1	YOR204W	CCT5	P40413	562 aa	Known RBP	13.13	□□□□□ -0.31
DED1	YOR204W	DUS3	Q06053	668 aa	Known RBP	13.13	□□□□□ -0.31
DED1	YOR204W	YOR296W	Q08748	1289 aa		13.13	□□□□□ -0.31
DED1	YOR204W	ASF1	P32447	279 aa		13.12	□□□□□ -0.31
DED1	YOR204W	ELM1	P32801	640 aa		13.12	□□□□□ -0.31
DED1	YOR204W	ORC6	P38826	435 aa		13.12	□□□□□ -0.31
DED1	YOR204W	SNF7	P39929	240 aa	Known RBP	13.12	□□□□□ -0.31
DED1	YOR204W	SPH1	Q06160	661 aa		13.12	□□□□□ -0.31
DED1	YOR204W	NBL1	Q3E7Y6	73 aa		13.12	□□□□□ -0.31
DED1	YOR204W	THR4	P16120	514 aa	Known RBP	13.11	□□□□□ -0.31
DED1	YOR204W	VMA2	P16140	517 aa	Known RBP	13.11	□□□□□ -0.31
DED1	YOR204W	MOT2	P34909	587 aa	Known RBP	13.11	□□□□□ -0.31
DED1	YOR204W	ATG32	P40458	529 aa		13.11	□□□□□ -0.31
DED1	YOR204W	YLR326W	Q06170	240 aa	Known RBP	13.11	□□□□□ -0.31
DED1	YOR204W	SLK19	Q08581	821 aa	Known RBP	13.11	□□□□□ -0.31
DED1	YOR204W	PWP2	P25635	923 aa	Known RBP	13.11	□□□□□ -0.31
DED1	YOR204W	UGA4	P32837	571 aa		13.11	□□□□□ -0.31
DED1	YOR204W	SAS3	P34218	831 aa		13.11	□□□□□ -0.31
DED1	YOR204W	VMS1	Q04311	632 aa	Known RBP	13.11	□□□□□ -0.31
DED1	YOR204W	TIP41	Q12199	356 aa		13.11	□□□□□ -0.31
DED1	YOR204W	SEC20	P28791	383 aa		13.1	□□□□□ -0.31
DED1	YOR204W	ARL1	P38116	183 aa	Known RBP	13.1	□□□□□ -0.31
DED1	YOR204W	ERG7	P38604	731 aa		13.1	□□□□□ -0.31
DED1	YOR204W	TUF1	P02992	437 aa	Known RBP	13.09	□□□□□ -0.31
DED1	YOR204W	ALG1	P16661	449 aa		13.09	□□□□□ -0.31
DED1	YOR204W	LIF1	P53150	421 aa		13.09	□□□□□ -0.31
DED1	YOR204W	KRE33	P53914	1056 aa	Known RBP	13.09	□□□□□ -0.31
DED1	YOR204W	COG8	Q04632	607 aa		13.09	□□□□□ -0.31
DED1	YOR204W	MMR1	Q06324	491 aa		13.09	□□□□□ -0.31
DED1	YOR204W	YPR148C	Q06523	435 aa		13.09	□□□□□ -0.31
DED1	YOR204W	ARP6	Q12509	438 aa		13.09	□□□□□ -0.31
DED1	YOR204W	DDP1	Q99321	188 aa	Known RBP	13.09	□□□□□ -0.31
DED1	YOR204W	CDC60	P26637	1090 aa	Known RBP	13.09	□□□□□ -0.31
DED1	YOR204W	YGR153W	P48238	217 aa		13.09	□□□□□ -0.31
DED1	YOR204W	TRS33	Q99394	268 aa		13.09	□□□□□ -0.31
DED1	YOR204W	GPA1	P08539	472 aa		13.08	□□□□□ -0.32
DED1	YOR204W	EUG1	P32474	517 aa		13.08	□□□□□ -0.32
DED1	YOR204W	GAA1	P39012	614 aa		13.08	□□□□□ -0.32
DED1	YOR204W	YER130C	P39959	443 aa		13.08	□□□□□ -0.32
DED1	YOR204W	YGL039W	P53183	348 aa	Known RBP	13.08	□□□□□ -0.32
DED1	YOR204W	ORC4	P54791	529 aa		13.08	□□□□□ -0.32
DED1	YOR204W	CSM3	Q04659	317 aa		13.08	□□□□□ -0.32
DED1	YOR204W	WHI4	Q07655	649 aa	Known RBP	13.08	□□□□□ -0.32
DED1	YOR204W	MCR1	P36060	302 aa	Known RBP	13.07	□□□□□ -0.32
DED1	YOR204W	RFT1	P38206	574 aa	Predicted RBP	13.07	□□□□□ -0.32
DED1	YOR204W	DUS4	Q06063	367 aa		13.07	□□□□□ -0.32
DED1	YOR204W	YDR461C-A	Q2V2P7	80 aa		13.07	□□□□□ -0.32
DED1	YOR204W	RPN12	P32496	274 aa		13.06	□□□□□ -0.32
DED1	YOR204W	SPR3	P41901	512 aa		13.06	□□□□□ -0.32
DED1	YOR204W	SDA1	P53313	767 aa	Known RBP	13.06	□□□□□ -0.32
DED1	YOR204W	TIF6	Q12522	245 aa	Known RBP	13.06	□□□□□ -0.32
DED1	YOR204W	AIM44	Q99299	758 aa		13.06	□□□□□ -0.32
DED1	YOR204W	ILV1	P00927	576 aa	Known RBP	13.06	□□□□□ -0.32
DED1	YOR204W	PKC1	P24583	1151 aa		13.06	□□□□□ -0.32
DED1	YOR204W	GPB2	P39717	880 aa		13.06	□□□□□ -0.32
DED1	YOR204W	RSM25	P40496	264 aa		13.06	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms