RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C ALG2P43636 503 aa8.23□□□□□ -1.09
RUP1YOR138C BOP3P53958 396 aa8.23□□□□□ -1.09
RUP1YOR138C UME1Q03010 460 aa8.23□□□□□ -1.09
RUP1YOR138C YDR341CQ05506 607 aaKnown RBP8.23□□□□□ -1.09
RUP1YOR138C CEX1Q12453 761 aa8.23□□□□□ -1.09
RUP1YOR138C RTS1P38903 757 aa8.22□□□□□ -1.09
RUP1YOR138C SMF1P38925 575 aa8.22□□□□□ -1.09
RUP1YOR138C CCC2P38995 1004 aa8.22□□□□□ -1.09
RUP1YOR138C ICP55P40051 511 aa8.22□□□□□ -1.09
RUP1YOR138C RPT4P53549 437 aaKnown RBP8.22□□□□□ -1.09
RUP1YOR138C RTC4P53850 401 aa8.22□□□□□ -1.09
RUP1YOR138C UTP5Q04177 643 aaKnown RBP8.22□□□□□ -1.09
RUP1YOR138C YAH1Q12184 172 aaKnown RBP8.22□□□□□ -1.09
RUP1YOR138C TIP41Q12199 356 aa8.22□□□□□ -1.09
RUP1YOR138C RUD3Q12234 484 aaKnown RBP8.22□□□□□ -1.09
RUP1YOR138C TUF1P02992 437 aaKnown RBP8.22□□□□□ -1.09
RUP1YOR138C STI1P15705 589 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
RUP1YOR138C SPO11P23179 398 aa8.22□□□□□ -1.09
RUP1YOR138C HIR1P32479 840 aa8.22□□□□□ -1.09
RUP1YOR138C ECM1P39715 212 aa8.22□□□□□ -1.09
RUP1YOR138C YLR001CQ07895 862 aa8.22□□□□□ -1.09
RUP1YOR138C YOL075CQ08234 1294 aa8.22□□□□□ -1.09
RUP1YOR138C YPL216WQ08964 1102 aa8.22□□□□□ -1.09
RUP1YOR138C CIT1P00890 479 aa8.21□□□□□ -1.1
RUP1YOR138C ALG1P16661 449 aa8.21□□□□□ -1.1
RUP1YOR138C BYE1P36106 594 aa8.21□□□□□ -1.1
RUP1YOR138C BCD1P38772 366 aa8.21□□□□□ -1.1
RUP1YOR138C DSN1P40568 576 aa8.21□□□□□ -1.1
RUP1YOR138C AIP1P46680 615 aaKnown RBP8.21□□□□□ -1.1
RUP1YOR138C CTK3P46963 296 aaPredicted RBP8.21□□□□□ -1.1
RUP1YOR138C IRC4Q03036 179 aa8.21□□□□□ -1.1
RUP1YOR138C TRS120Q04183 1289 aa8.21□□□□□ -1.1
RUP1YOR138C PRO3P32263 286 aaKnown RBP8.2□□□□□ -1.1
RUP1YOR138C SRB4P32569 687 aa8.2□□□□□ -1.1
RUP1YOR138C ECM32P32644 1121 aaKnown RBP8.2□□□□□ -1.1
RUP1YOR138C MED8P38304 223 aa8.2□□□□□ -1.1
RUP1YOR138C VID27P40157 782 aa8.2□□□□□ -1.1
RUP1YOR138C RPN11P43588 306 aaKnown RBP8.2□□□□□ -1.1
RUP1YOR138C SMD2Q06217 110 aaKnown RBP8.2□□□□□ -1.1
RUP1YOR138C CWC2Q12046 339 aaPredicted RBP8.2□□□□□ -1.1
RUP1YOR138C RAD57P25301 460 aa8.2□□□□□ -1.1
RUP1YOR138C SPL2P38839 148 aa8.2□□□□□ -1.1
RUP1YOR138C BUD16P39988 312 aa8.2□□□□□ -1.1
RUP1YOR138C EFM4P40516 257 aa8.2□□□□□ -1.1
RUP1YOR138C HUL4P40985 892 aa8.2□□□□□ -1.1
RUP1YOR138C MIC19P43594 170 aa8.2□□□□□ -1.1
RUP1YOR138C RAD1P06777 1100 aa8.19□□□□□ -1.1
RUP1YOR138C PDC6P26263 563 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C ERG7P38604 731 aa8.19□□□□□ -1.1
RUP1YOR138C TIF4632P39936 914 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C VFA1P40080 203 aa8.19□□□□□ -1.1
RUP1YOR138C YAP5P40574 245 aa8.19□□□□□ -1.1
RUP1YOR138C HFM1P51979 1187 aa8.19□□□□□ -1.1
RUP1YOR138C PIP2P52960 996 aa8.19□□□□□ -1.1
RUP1YOR138C SDA1P53313 767 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C AAD16Q02895 342 aa8.19□□□□□ -1.1
RUP1YOR138C YAP7Q08182 245 aa8.19□□□□□ -1.1
RUP1YOR138C TOM70P07213 617 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C CAF20P12962 161 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C PAP1P29468 568 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C FRD1P32614 470 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C MUD2P36084 527 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C UBA2P52488 636 aa8.19□□□□□ -1.1
RUP1YOR138C YGL138CP53122 345 aa8.19□□□□□ -1.1
RUP1YOR138C PRP42Q03776 544 aaKnown RBP8.19□□□□□ -1.1
RUP1YOR138C SFH1Q06168 426 aa8.19□□□□□ -1.1
RUP1YOR138C SPO75Q07798 868 aa8.19□□□□□ -1.1
RUP1YOR138C BUG1Q12191 341 aa8.19□□□□□ -1.1
RUP1YOR138C YOL087CQ99247 1116 aa8.19□□□□□ -1.1
RUP1YOR138C RNA1P11745 407 aaKnown RBP8.18□□□□□ -1.1
RUP1YOR138C RAD53P22216 821 aa8.18□□□□□ -1.1
RUP1YOR138C YMR124WP39523 943 aaKnown RBP8.18□□□□□ -1.1
RUP1YOR138C DAK2P43550 591 aa8.18□□□□□ -1.1
RUP1YOR138C IES1P43579 692 aa8.18□□□□□ -1.1
RUP1YOR138C RPT6Q01939 405 aaKnown RBP8.18□□□□□ -1.1
RUP1YOR138C SYF1Q04048 859 aaPredicted RBP8.18□□□□□ -1.1
RUP1YOR138C MYO5Q04439 1219 aaKnown RBP8.18□□□□□ -1.1
RUP1YOR138C BDF2Q07442 638 aa8.18□□□□□ -1.1
RUP1YOR138C YPL260WQ08977 551 aa8.18□□□□□ -1.1
RUP1YOR138C TOP1P04786 769 aa8.17□□□□□ -1.1
RUP1YOR138C THR4P16120 514 aaKnown RBP8.17□□□□□ -1.1
RUP1YOR138C OM45P16547 393 aa8.17□□□□□ -1.1
RUP1YOR138C LCB1P25045 558 aaKnown RBP8.17□□□□□ -1.1
RUP1YOR138C YKL091CP33324 310 aaKnown RBP8.17□□□□□ -1.1
RUP1YOR138C STT3P39007 718 aaKnown RBP8.17□□□□□ -1.1
RUP1YOR138C YFH7P43591 353 aa8.17□□□□□ -1.1
RUP1YOR138C RAD61Q99359 647 aa8.17□□□□□ -1.1
RUP1YOR138C VPS8P39702 1274 aa8.17□□□□□ -1.1
RUP1YOR138C SAS4Q04003 481 aa8.17□□□□□ -1.1
RUP1YOR138C SOV1Q04748 898 aa8.17□□□□□ -1.1
RUP1YOR138C TOS4Q06266 489 aa8.17□□□□□ -1.1
RUP1YOR138C DIB1Q06819 143 aaPredicted RBP8.17□□□□□ -1.1
RUP1YOR138C ACE2P21192 770 aa8.16□□□□□ -1.1
RUP1YOR138C NFU1P32860 256 aa8.16□□□□□ -1.1
RUP1YOR138C SWE1P32944 819 aa8.16□□□□□ -1.1
RUP1YOR138C CNS1P33313 385 aa8.16□□□□□ -1.1
RUP1YOR138C PET10P36139 283 aa8.16□□□□□ -1.1
RUP1YOR138C NGL3Q03210 505 aa8.16□□□□□ -1.1
RUP1YOR138C YOR223WQ12015 292 aa8.16□□□□□ -1.1
RUP1YOR138C PPR1P07272 904 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms