RNA–Protein interactions for RNA: YOL067C

RTG1, Transcript of Transcription factor (bHLH) involved in interorganelle communication, yeast

Gene RTG1, Length 534 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG1	YOL067C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.24	□□□□□ -0.29	not detected
RTG1	YOL067C	SPN1	Q06505	410 aa	Predicted RBP	13.24	□□□□□ -0.29
RTG1	YOL067C	PGA3	Q12746	312 aa	Known RBP	13.24	□□□□□ -0.29
RTG1	YOL067C	YDR034W-B	Q6Q5X2	51 aa		13.24	□□□□□ -0.29
RTG1	YOL067C	AAP1	P37898	856 aa	Known RBP	13.23	□□□□□ -0.29
RTG1	YOL067C	FLR1	P38124	548 aa		13.23	□□□□□ -0.29
RTG1	YOL067C	PES4	P39684	611 aa		13.23	□□□□□ -0.29
RTG1	YOL067C	VPS72	Q03388	795 aa		13.23	□□□□□ -0.29
RTG1	YOL067C	MYO5	Q04439	1219 aa	Known RBP	13.23	□□□□□ -0.29
RTG1	YOL067C	YMR084W	A2P2R3	262 aa		13.22	□□□□□ -0.29
RTG1	YOL067C	VAS1	P07806	1104 aa	Known RBP	13.22	□□□□□ -0.29
RTG1	YOL067C	MAK31	P23059	88 aa		13.22	□□□□□ -0.29
RTG1	YOL067C	GRS1	P38088	690 aa	Known RBP	13.22	□□□□□ -0.29
RTG1	YOL067C	FMS1	P50264	508 aa		13.22	□□□□□ -0.29
RTG1	YOL067C	RTP1	Q12751	981 aa		13.22	□□□□□ -0.29
RTG1	YOL067C	FKS1	P38631	1876 aa	Known RBP	13.22	□□□□□ -0.29
RTG1	YOL067C	RIF1	P29539	1916 aa		13.21	□□□□□ -0.29
RTG1	YOL067C	IMP2'	P32351	346 aa		13.21	□□□□□ -0.29
RTG1	YOL067C	CRG1	P38892	291 aa	RIP-Chip data	13.21	□□□□□ -0.29	not detected
RTG1	YOL067C	GUD1	Q07729	489 aa		13.21	□□□□□ -0.29
RTG1	YOL067C	LDB19	Q12502	818 aa		13.21	□□□□□ -0.29
RTG1	YOL067C	MAS2	P11914	482 aa		13.2	□□□□□ -0.3
RTG1	YOL067C	GPT2	P36148	743 aa		13.2	□□□□□ -0.3
RTG1	YOL067C	FPR4	Q06205	392 aa	Predicted RBP	13.2	□□□□□ -0.3
RTG1	YOL067C	TFC6	Q06339	672 aa		13.2	□□□□□ -0.3
RTG1	YOL067C	MSC7	P38694	644 aa		13.19	□□□□□ -0.3
RTG1	YOL067C	MDM1	Q01846	1127 aa		13.19	□□□□□ -0.3
RTG1	YOL067C	ISA1	Q07821	250 aa	Predicted RBP	13.19	□□□□□ -0.3
RTG1	YOL067C	HEM1	P09950	548 aa	Predicted RBP	13.18	□□□□□ -0.3
RTG1	YOL067C	CIC1	P38779	376 aa	Known RBP	13.18	□□□□□ -0.3
RTG1	YOL067C	LIF1	P53150	421 aa		13.18	□□□□□ -0.3
RTG1	YOL067C	LSB1	P53281	241 aa		13.18	□□□□□ -0.3
RTG1	YOL067C	YNL115C	P53925	644 aa		13.18	□□□□□ -0.3
RTG1	YOL067C	YLR326W	Q06170	240 aa	Known RBP	13.18	□□□□□ -0.3
RTG1	YOL067C	CAD1	P24813	409 aa	Known RBP	13.17	□□□□□ -0.3
RTG1	YOL067C	SEC8	P32855	1065 aa		13.17	□□□□□ -0.3
RTG1	YOL067C	RAD50	P12753	1312 aa		13.16	□□□□□ -0.3
RTG1	YOL067C	POT1	P27796	417 aa	Known RBP RIP-Chip data	13.16	□□□□□ -0.3	not detected
RTG1	YOL067C	RPS7B	P48164	190 aa	Known RBP	13.16	□□□□□ -0.3
RTG1	YOL067C	CLF1	Q12309	687 aa	Predicted RBP	13.16	□□□□□ -0.3
RTG1	YOL067C	TIM23	P32897	222 aa		13.15	□□□□□ -0.3
RTG1	YOL067C	INP51	P40559	946 aa	Known RBP	13.15	□□□□□ -0.3
RTG1	YOL067C	SGM1	P47166	707 aa		13.15	□□□□□ -0.3
RTG1	YOL067C	FOL2	P51601	243 aa	Known RBP	13.15	□□□□□ -0.3
RTG1	YOL067C	YOR111W	Q99210	232 aa		13.15	□□□□□ -0.3
RTG1	YOL067C	PTA1	Q01329	785 aa	Predicted RBP	13.14	□□□□□ -0.31
RTG1	YOL067C	ECM16	Q04217	1267 aa	Known RBP	13.14	□□□□□ -0.31
RTG1	YOL067C	ESF1	Q06344	628 aa	Known RBP	13.14	□□□□□ -0.31
RTG1	YOL067C	DSE3	Q08729	430 aa		13.14	□□□□□ -0.31
RTG1	YOL067C	IRE1	P32361	1115 aa		13.12	□□□□□ -0.31
RTG1	YOL067C	UGA4	P32837	571 aa		13.12	□□□□□ -0.31
RTG1	YOL067C	DUR3	P33413	735 aa		13.12	□□□□□ -0.31
RTG1	YOL067C	EST2	Q06163	884 aa		13.12	□□□□□ -0.31
RTG1	YOL067C	VIP1	Q06685	1146 aa	Known RBP	13.12	□□□□□ -0.31
RTG1	YOL067C	ATG11	Q12527	1178 aa		13.12	□□□□□ -0.31
RTG1	YOL067C	PEP3	P27801	918 aa		13.11	□□□□□ -0.31
RTG1	YOL067C	BRN1	P38170	754 aa		13.11	□□□□□ -0.31
RTG1	YOL067C	AZR1	P50080	613 aa		13.11	□□□□□ -0.31
RTG1	YOL067C	ASE1	P50275	885 aa		13.11	□□□□□ -0.31
RTG1	YOL067C	MSC2	Q03455	724 aa		13.11	□□□□□ -0.31
RTG1	YOL067C	OXR1	Q08952	273 aa		13.11	□□□□□ -0.31
RTG1	YOL067C	TY1B-A	O13527	1196 aa	Known RBP	13.1	□□□□□ -0.31
RTG1	YOL067C	RPL8A	P17076	256 aa	Known RBP	13.1	□□□□□ -0.31
RTG1	YOL067C	TVP23	P38962	199 aa		13.1	□□□□□ -0.31
RTG1	YOL067C	UBP15	P50101	1230 aa		13.1	□□□□□ -0.31
RTG1	YOL067C	HXT17	P53631	564 aa		13.1	□□□□□ -0.31
RTG1	YOL067C	YLL058W	Q12198	575 aa		13.1	□□□□□ -0.31
RTG1	YOL067C	SNA3	P14359	133 aa		13.09	□□□□□ -0.31
RTG1	YOL067C	JHD1	P40034	492 aa		13.09	□□□□□ -0.31
RTG1	YOL067C	ALG2	P43636	503 aa		13.09	□□□□□ -0.31
RTG1	YOL067C	PAN5	P38787	379 aa		13.08	□□□□□ -0.32
RTG1	YOL067C	PWP2	P25635	923 aa	Known RBP	13.07	□□□□□ -0.32
RTG1	YOL067C	SEC20	P28791	383 aa		13.07	□□□□□ -0.32
RTG1	YOL067C	YHR131C	P38835	850 aa		13.07	□□□□□ -0.32
RTG1	YOL067C	TPM2	P40414	161 aa		13.07	□□□□□ -0.32
RTG1	YOL067C	RSC8	P43609	557 aa	Known RBP	13.07	□□□□□ -0.32
RTG1	YOL067C	RNR3	P21672	869 aa	Known RBP	13.06	□□□□□ -0.32
RTG1	YOL067C	CIT1	P00890	479 aa		13.05	□□□□□ -0.32
RTG1	YOL067C	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.05	□□□□□ -0.32	not detected
RTG1	YOL067C	SUL1	P38359	859 aa		13.05	□□□□□ -0.32
RTG1	YOL067C	AKR1	P39010	764 aa		13.05	□□□□□ -0.32
RTG1	YOL067C	ARP6	Q12509	438 aa		13.05	□□□□□ -0.32
RTG1	YOL067C	KIN82	P25341	720 aa		13.04	□□□□□ -0.32
RTG1	YOL067C	BRL1	P38770	471 aa		13.04	□□□□□ -0.32
RTG1	YOL067C	HXT13	P39924	564 aa		13.04	□□□□□ -0.32
RTG1	YOL067C	SAD1	P43589	448 aa		13.04	□□□□□ -0.32
RTG1	YOL067C	WHI4	Q07655	649 aa	Known RBP	13.04	□□□□□ -0.32
RTG1	YOL067C	MET6	P05694	767 aa	Known RBP	13.03	□□□□□ -0.32
RTG1	YOL067C	MCM6	P53091	1017 aa	Known RBP	13.03	□□□□□ -0.32
RTG1	YOL067C	YDR341C	Q05506	607 aa	Known RBP	13.03	□□□□□ -0.32
RTG1	YOL067C	UBP11	P36026	717 aa		13.02	□□□□□ -0.33
RTG1	YOL067C	GPI13	Q07830	1017 aa		13.02	□□□□□ -0.33
RTG1	YOL067C	SES1	P07284	462 aa	Known RBP	13.01	□□□□□ -0.33
RTG1	YOL067C	TPM1	P17536	199 aa	Known RBP	13.01	□□□□□ -0.33
RTG1	YOL067C	ALD5	P40047	520 aa	Known RBP	13.01	□□□□□ -0.33
RTG1	YOL067C	VID28	P40547	921 aa		13	□□□□□ -0.33
RTG1	YOL067C	YGR273C	P53329	174 aa		13	□□□□□ -0.33
RTG1	YOL067C	GCR2	Q01722	534 aa		13	□□□□□ -0.33
RTG1	YOL067C	SWI6	P09959	803 aa		12.99	□□□□□ -0.33
RTG1	YOL067C	CLB5	P30283	435 aa		12.99	□□□□□ -0.33

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms