RNA–Protein interactions for RNA: YNL163C

RIA1, Transcript of Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, yeast

Gene RIA1, Length 3,333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIA1	YNL163C	GSY2	P27472	705 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	STO1	P34160	861 aa	Known RBP	4.72	□□□□□ -1.65
RIA1	YNL163C	BUD6	P41697	788 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	MRS2	Q01926	470 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	PRP3	Q03338	469 aa	Predicted RBP	4.72	□□□□□ -1.65
RIA1	YNL163C	TIM23	P32897	222 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	ASH1	P34233	588 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	ICL2	Q12031	575 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	FKS1	P38631	1876 aa	Known RBP	4.72	□□□□□ -1.65
RIA1	YNL163C	MYO1	P08964	1928 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	STR2	P47164	639 aa		4.72	□□□□□ -1.65
RIA1	YNL163C	SWH1	P35845	1188 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	CAJ1	P39101	391 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	CLA4	P48562	842 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	SNU71	P53207	620 aa	Known RBP	4.71	□□□□□ -1.66
RIA1	YNL163C	SKG3	Q06315	1026 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	AIM7	Q12156	149 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
RIA1	YNL163C	RAD1	P06777	1100 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	UBC1	P21734	215 aa	Known RBP	4.71	□□□□□ -1.66
RIA1	YNL163C	MRC1	P25588	1096 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	VPS4	P52917	437 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	ELG1	Q12050	791 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	RPT3	P33298	428 aa	Known RBP	4.71	□□□□□ -1.66
RIA1	YNL163C	HAL5	P38970	855 aa	Known RBP	4.71	□□□□□ -1.66
RIA1	YNL163C	CAF130	P53280	1122 aa	Predicted RBP	4.71	□□□□□ -1.66
RIA1	YNL163C	TOS4	Q06266	489 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	PSR2	Q07949	397 aa		4.71	□□□□□ -1.66
RIA1	YNL163C	RUD3	Q12234	484 aa	Known RBP	4.71	□□□□□ -1.66
RIA1	YNL163C	UBR2	Q07963	1872 aa		4.7	□□□□□ -1.66
RIA1	YNL163C	MPE1	P35728	441 aa	Known RBP	4.7	□□□□□ -1.66
RIA1	YNL163C	SIP3	P38717	1229 aa		4.7	□□□□□ -1.66
RIA1	YNL163C	HYR1	P40581	163 aa	Known RBP	4.7	□□□□□ -1.66
RIA1	YNL163C	PKH1	Q03407	766 aa		4.7	□□□□□ -1.66
RIA1	YNL163C	YPL216W	Q08964	1102 aa		4.7	□□□□□ -1.66
RIA1	YNL163C	MAK11	P20484	414 aa	Known RBP	4.7	□□□□□ -1.66
RIA1	YNL163C	DAL7	P21826	554 aa		4.7	□□□□□ -1.66
RIA1	YNL163C	TPS3	P38426	1054 aa	Known RBP	4.7	□□□□□ -1.66
RIA1	YNL163C	NDC80	P40460	691 aa		4.7	□□□□□ -1.66
RIA1	YNL163C	RPS6A	P0CX37	236 aa	Known RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	RPS6B	P0CX38	236 aa	Predicted RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	BRE1	Q07457	700 aa	Known RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	DDP1	Q99321	188 aa	Known RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	DEF1	P35732	738 aa	Known RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	YJR142W	P47173	342 aa		4.69	□□□□□ -1.66
RIA1	YNL163C	ATG9	Q12142	997 aa		4.69	□□□□□ -1.66
RIA1	YNL163C	HXK1	P04806	485 aa	Known RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	RPS7A	P26786	190 aa	Known RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	KTR1	P27810	393 aa	Known RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	OCT1	P35999	772 aa		4.69	□□□□□ -1.66
RIA1	YNL163C	CTK3	P46963	296 aa	Predicted RBP	4.69	□□□□□ -1.66
RIA1	YNL163C	JJJ2	P46997	583 aa		4.69	□□□□□ -1.66
RIA1	YNL163C	ATG23	Q06671	453 aa		4.69	□□□□□ -1.66
RIA1	YNL163C	MSH1	P25846	959 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	NGR1	P32831	672 aa	Known RBP	4.68	□□□□□ -1.66
RIA1	YNL163C	RPC25	P35718	212 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	LYS14	P40971	790 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	IOC3	P43596	787 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	LSC2	P53312	427 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	YDR338C	Q05497	695 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	RRP6	Q12149	733 aa	Known RBP	4.68	□□□□□ -1.66
RIA1	YNL163C	SNU66	Q12420	587 aa	Predicted RBP	4.68	□□□□□ -1.66
RIA1	YNL163C	PAP1	P29468	568 aa	Known RBP	4.68	□□□□□ -1.66
RIA1	YNL163C	ELM1	P32801	640 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	PTC4	P38089	393 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	DSF2	P38213	736 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	OSH3	P38713	996 aa	Known RBP	4.68	□□□□□ -1.66
RIA1	YNL163C	YKE2	P52553	114 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	OMS1	Q06668	471 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	YOR223W	Q12015	292 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	LDB19	Q12502	818 aa		4.68	□□□□□ -1.66
RIA1	YNL163C	SPT2	P06843	333 aa	Predicted RBP	4.67	□□□□□ -1.66
RIA1	YNL163C	TAF13	P11747	167 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	SHM1	P37292	490 aa	Predicted RBP	4.67	□□□□□ -1.66
RIA1	YNL163C	PNT1	P38969	423 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	VAB2	P40003	282 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	PUS6	P53294	404 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	VPS75	P53853	264 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	KAR5	Q04746	504 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	GUD1	Q07729	489 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	ETT1	Q08421	412 aa	Known RBP	4.67	□□□□□ -1.66
RIA1	YNL163C	MDM20	Q12387	796 aa	Known RBP	4.67	□□□□□ -1.66
RIA1	YNL163C	YOL087C	Q99247	1116 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	LAM4	P38800	1345 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	VPS1	P21576	704 aa	Known RBP	4.67	□□□□□ -1.66
RIA1	YNL163C	HEL1	P36113	551 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	MAL31	P38156	614 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	SMF1	P38925	575 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	ATG3	P40344	310 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	HUL5	P53119	910 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	YAF9	P53930	226 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
RIA1	YNL163C	MLC1	P53141	149 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	EIS1	Q05050	843 aa	Known RBP	4.67	□□□□□ -1.66
RIA1	YNL163C	YCG1	Q06680	1035 aa		4.67	□□□□□ -1.66
RIA1	YNL163C	PUS1	Q12211	544 aa	Known RBP	4.67	□□□□□ -1.66
RIA1	YNL163C	SEC18	P18759	758 aa	Known RBP	4.66	□□□□□ -1.66
RIA1	YNL163C	PKC1	P24583	1151 aa		4.66	□□□□□ -1.66
RIA1	YNL163C	SPT5	P27692	1063 aa	Known RBP	4.66	□□□□□ -1.66
RIA1	YNL163C	PSO2	P30620	661 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms