RNA–Protein interactions for RNA: YMR045C

YMR045C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR045C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR045CYMR045C SWI3P32591 825 aa2.09□□□□□ -2.07
YMR045CYMR045C RRN6P32786 894 aa2.09□□□□□ -2.07
YMR045CYMR045C APL2P36000 726 aaPredicted RBP2.09□□□□□ -2.07
YMR045CYMR045C PAM1P37304 830 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C REI1P38344 393 aaPredicted RBP2.09□□□□□ -2.07
YMR045CYMR045C HSE1P38753 452 aa2.09□□□□□ -2.07
YMR045CYMR045C SPC97P38863 823 aa2.09□□□□□ -2.07
YMR045CYMR045C SPC72P39723 622 aa2.09□□□□□ -2.07
YMR045CYMR045C MRK1P50873 501 aa2.09□□□□□ -2.07
YMR045CYMR045C RAT1Q02792 1006 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C CWC21Q03375 135 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C ITT1Q04638 464 aa2.09□□□□□ -2.07
YMR045CYMR045C NSE3Q05541 303 aa2.09□□□□□ -2.07
YMR045CYMR045C SUP45P12385 437 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C SSA4P22202 642 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C MRPL32P25348 183 aa2.09□□□□□ -2.07
YMR045CYMR045C BUD14P27637 709 aa2.09□□□□□ -2.07
YMR045CYMR045C DBF4P32325 704 aa2.09□□□□□ -2.07
YMR045CYMR045C MPE1P35728 441 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C TAF5P38129 798 aa2.09□□□□□ -2.07
YMR045CYMR045C NTA1P40354 457 aa2.09□□□□□ -2.07
YMR045CYMR045C GUS1P46655 708 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
YMR045CYMR045C NPA3P47122 385 aa2.09□□□□□ -2.07
YMR045CYMR045C SFB2P53953 876 aa2.09□□□□□ -2.07
YMR045CYMR045C HCR1Q05775 265 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C SGD1Q06132 899 aa2.09□□□□□ -2.07
YMR045CYMR045C YPQ2Q06328 317 aa2.09□□□□□ -2.07
YMR045CYMR045C PMT7Q06644 662 aa2.09□□□□□ -2.07
YMR045CYMR045C ESC8Q08119 714 aa2.09□□□□□ -2.07
YMR045CYMR045C MED11Q99278 115 aa2.09□□□□□ -2.07
YMR045CYMR045C SIR3P06701 978 aa2.09□□□□□ -2.08
YMR045CYMR045C FRD1P32614 470 aaKnown RBP2.09□□□□□ -2.08
YMR045CYMR045C RTG3P38165 486 aa2.09□□□□□ -2.08
YMR045CYMR045C EFM1P38732 585 aa2.09□□□□□ -2.08
YMR045CYMR045C BRL1P38770 471 aa2.09□□□□□ -2.08
YMR045CYMR045C RTR1P40084 226 aaPredicted RBP2.09□□□□□ -2.08
YMR045CYMR045C FAF1P40546 346 aaPredicted RBP2.09□□□□□ -2.08
YMR045CYMR045C CNM67P53865 581 aaKnown RBP2.09□□□□□ -2.08
YMR045CYMR045C SEN54Q02825 467 aaPredicted RBP2.09□□□□□ -2.08
YMR045CYMR045C SEG1Q04279 960 aa2.09□□□□□ -2.08
YMR045CYMR045C MAM3Q12296 706 aa2.09□□□□□ -2.08
YMR045CYMR045C CDC23P16522 626 aa2.09□□□□□ -2.08
YMR045CYMR045C MRPS28P21771 286 aa2.09□□□□□ -2.08
YMR045CYMR045C RRP7P25368 297 aaPredicted RBP2.09□□□□□ -2.08
YMR045CYMR045C BRF1P29056 596 aa2.09□□□□□ -2.08
YMR045CYMR045C RPC34P32910 317 aa2.09□□□□□ -2.08
YMR045CYMR045C NIP100P33420 868 aa2.09□□□□□ -2.08
YMR045CYMR045C AMN1P38285 549 aaPredicted RBP2.09□□□□□ -2.08
YMR045CYMR045C MBP1P39678 833 aa2.09□□□□□ -2.08
YMR045CYMR045C SIP5P40210 489 aaKnown RBP2.09□□□□□ -2.08
YMR045CYMR045C OPT1P40897 799 aa2.09□□□□□ -2.08
YMR045CYMR045C CCM1P48237 864 aaPredicted RBP2.09□□□□□ -2.08
YMR045CYMR045C SHE4P51534 789 aa2.09□□□□□ -2.08
YMR045CYMR045C CWH41P53008 833 aa2.09□□□□□ -2.08
YMR045CYMR045C SHE10P53075 577 aa2.09□□□□□ -2.08
YMR045CYMR045C SPO1P53541 631 aa2.09□□□□□ -2.08
YMR045CYMR045C RPA49Q01080 415 aaPredicted RBP2.09□□□□□ -2.08
YMR045CYMR045C SOV1Q04748 898 aa2.09□□□□□ -2.08
YMR045CYMR045C YIG1Q08956 461 aa2.09□□□□□ -2.08
YMR045CYMR045C VPS34P22543 875 aa2.08□□□□□ -2.08
YMR045CYMR045C NGG1P32494 702 aa2.08□□□□□ -2.08
YMR045CYMR045C RIM11P38615 370 aa2.08□□□□□ -2.08
YMR045CYMR045C BFR1P38934 470 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
YMR045CYMR045C PIK1P39104 1066 aa2.08□□□□□ -2.08
YMR045CYMR045C TIF4631P39935 952 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C FYV8P46949 817 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C IDS2P46958 469 aa2.08□□□□□ -2.08
YMR045CYMR045C DAD3P69850 94 aa2.08□□□□□ -2.08
YMR045CYMR045C CDC55Q00362 526 aa2.08□□□□□ -2.08
YMR045CYMR045C RPN9Q04062 393 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C MMR1Q06324 491 aa2.08□□□□□ -2.08
YMR045CYMR045C YDL073WQ07454 984 aa2.08□□□□□ -2.08
YMR045CYMR045C MSC6Q08818 692 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C PIN2Q12057 282 aa2.08□□□□□ -2.08
YMR045CYMR045C RPL17AP05740 184 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C PHO85P17157 305 aa2.08□□□□□ -2.08
YMR045CYMR045C DPB2P24482 689 aaPredicted RBP2.08□□□□□ -2.08
YMR045CYMR045C PDB1P32473 366 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C KES1P35844 434 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C RPL17BP46990 184 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C ARH1P48360 493 aa2.08□□□□□ -2.08
YMR045CYMR045C GYP7P48365 746 aa2.08□□□□□ -2.08
YMR045CYMR045C MSB3P48566 633 aaPredicted RBP2.08□□□□□ -2.08
YMR045CYMR045C YGR053CP53234 283 aa2.08□□□□□ -2.08
YMR045CYMR045C YGR122WP53272 402 aa2.08□□□□□ -2.08
YMR045CYMR045C JJJ1P53863 590 aa2.08□□□□□ -2.08
YMR045CYMR045C RRP36Q12481 300 aaPredicted RBP2.08□□□□□ -2.08
YMR045CYMR045C CMR1Q12510 522 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C ERG12P07277 443 aa2.08□□□□□ -2.08
YMR045CYMR045C OLE1P21147 510 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C ARO2P28777 376 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C MCM5P29496 775 aaKnown RBP2.08□□□□□ -2.08
YMR045CYMR045C LHS1P36016 881 aa2.08□□□□□ -2.08
YMR045CYMR045C SPC42P36094 363 aa2.08□□□□□ -2.08
YMR045CYMR045C TAF12Q03761 539 aa2.08□□□□□ -2.08
YMR045CYMR045C HDA2Q06629 674 aa2.08□□□□□ -2.08
YMR045CYMR045C RIM20Q12033 661 aa2.08□□□□□ -2.08
YMR045CYMR045C VIK1Q12045 647 aa2.08□□□□□ -2.08
YMR045CYMR045C KCC4P25389 1037 aa2.08□□□□□ -2.08
YMR045CYMR045C POL4P25615 582 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms