RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C FAR11P53917 953 aa3.12□□□□□ -1.91
SGD1YLR336C WRS1Q12109 432 aaKnown RBP3.12□□□□□ -1.91
SGD1YLR336C GRX1P25373 110 aaKnown RBP3.11□□□□□ -1.91
SGD1YLR336C RAD27P26793 382 aa3.11□□□□□ -1.91
SGD1YLR336C TYW3P53177 273 aa3.11□□□□□ -1.91
SGD1YLR336C NCE103P53615 221 aa3.11□□□□□ -1.91
SGD1YLR336C BAS1P22035 811 aa3.11□□□□□ -1.91
SGD1YLR336C PRY1P47032 299 aa3.11□□□□□ -1.91
SGD1YLR336C TIF35Q04067 274 aaKnown RBP3.11□□□□□ -1.91
SGD1YLR336C FAL1Q12099 399 aaKnown RBP3.11□□□□□ -1.91
SGD1YLR336C MOT2P34909 587 aaKnown RBP3.1□□□□□ -1.91
SGD1YLR336C SEA4P38164 1038 aa3.1□□□□□ -1.91
SGD1YLR336C ICP55P40051 511 aa3.1□□□□□ -1.91
SGD1YLR336C IOC3P43596 787 aa3.1□□□□□ -1.91
SGD1YLR336C ELA1P53861 379 aaPredicted RBP3.1□□□□□ -1.91
SGD1YLR336C YLR225CQ05948 407 aaKnown RBP3.1□□□□□ -1.91
SGD1YLR336C YOR223WQ12015 292 aa3.1□□□□□ -1.91
SGD1YLR336C SYP1P25623 870 aaKnown RBP3.1□□□□□ -1.91
SGD1YLR336C LYP1P32487 611 aa3.1□□□□□ -1.91
SGD1YLR336C ABD1P32783 436 aaPredicted RBP3.1□□□□□ -1.91
SGD1YLR336C MCX1P38323 520 aaPredicted RBP3.1□□□□□ -1.91
SGD1YLR336C YAR028WP39548 234 aa3.1□□□□□ -1.91
SGD1YLR336C SLN1P39928 1220 aaPredicted RBP3.1□□□□□ -1.91
SGD1YLR336C NSG2P53898 299 aa3.1□□□□□ -1.91
SGD1YLR336C DOT1Q04089 582 aaKnown RBP3.1□□□□□ -1.91
SGD1YLR336C PUS1Q12211 544 aaKnown RBP3.1□□□□□ -1.91
SGD1YLR336C YCK2P23292 546 aaKnown RBP3.09□□□□□ -1.91
SGD1YLR336C ALG3P38179 458 aa3.09□□□□□ -1.91
SGD1YLR336C SPF1P39986 1215 aaKnown RBP3.09□□□□□ -1.91
SGD1YLR336C ENT3P47160 408 aa3.09□□□□□ -1.91
SGD1YLR336C RKM2Q03942 479 aa3.09□□□□□ -1.91
SGD1YLR336C AOS1Q06624 347 aa3.09□□□□□ -1.91
SGD1YLR336C YOL098CQ12496 1037 aa3.09□□□□□ -1.91
SGD1YLR336C YTA7P40340 1379 aa3.09□□□□□ -1.91
SGD1YLR336C AI3P03877 415 aa3.09□□□□□ -1.92
SGD1YLR336C STE5P32917 917 aa3.09□□□□□ -1.92
SGD1YLR336C GPT2P36148 743 aa3.09□□□□□ -1.92
SGD1YLR336C AVO1Q08236 1176 aa3.09□□□□□ -1.92
SGD1YLR336C YPL066WQ12194 479 aa3.09□□□□□ -1.92
SGD1YLR336C YDR215CQ12240 137 aa3.09□□□□□ -1.92
SGD1YLR336C YLL054CQ12244 843 aa3.09□□□□□ -1.92
SGD1YLR336C SFA1P32771 386 aa3.08□□□□□ -1.92
SGD1YLR336C NMD3P38861 518 aaKnown RBP3.08□□□□□ -1.92
SGD1YLR336C LSB3P43603 459 aaKnown RBP3.08□□□□□ -1.92
SGD1YLR336C TDA5Q06417 326 aaKnown RBP3.08□□□□□ -1.92
SGD1YLR336C PTC5Q12511 572 aa3.08□□□□□ -1.92
SGD1YLR336C INO1P11986 533 aa3.08□□□□□ -1.92
SGD1YLR336C DBP5P20449 482 aaKnown RBP3.08□□□□□ -1.92
SGD1YLR336C PUF4P25339 888 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
SGD1YLR336C MSH4P40965 878 aaPredicted RBP3.08□□□□□ -1.92
SGD1YLR336C CNN1P43618 361 aa3.08□□□□□ -1.92
SGD1YLR336C RET1P22276 1149 aaKnown RBP3.07□□□□□ -1.92
SGD1YLR336C MLS1P30952 554 aa3.07□□□□□ -1.92
SGD1YLR336C ATG14P38270 344 aa3.07□□□□□ -1.92
SGD1YLR336C MPH1P40562 993 aa3.07□□□□□ -1.92
SGD1YLR336C AGP1P25376 633 aa3.07□□□□□ -1.92
SGD1YLR336C VBA5P36172 582 aa3.07□□□□□ -1.92
SGD1YLR336C QNS1P38795 714 aaKnown RBP3.07□□□□□ -1.92
SGD1YLR336C EAR1Q03212 550 aa3.07□□□□□ -1.92
SGD1YLR336C YMR187CQ03236 431 aa3.07□□□□□ -1.92
SGD1YLR336C SPO20Q04359 397 aa3.07□□□□□ -1.92
SGD1YLR336C NSE3Q05541 303 aa3.07□□□□□ -1.92
SGD1YLR336C RSA3Q05942 220 aaKnown RBP3.07□□□□□ -1.92
SGD1YLR336C LAP2Q10740 671 aa3.07□□□□□ -1.92
SGD1YLR336C RAD4P14736 754 aa3.06□□□□□ -1.92
SGD1YLR336C NAM7P30771 971 aaKnown RBP3.06□□□□□ -1.92
SGD1YLR336C MCM7P38132 845 aa3.06□□□□□ -1.92
SGD1YLR336C YBR184WP38299 523 aa3.06□□□□□ -1.92
SGD1YLR336C YGL176CP46945 554 aa3.06□□□□□ -1.92
SGD1YLR336C MCA1Q08601 432 aa3.06□□□□□ -1.92
SGD1YLR336C RSC6P25632 483 aa3.06□□□□□ -1.92
SGD1YLR336C YJL049WP47048 450 aa3.06□□□□□ -1.92
SGD1YLR336C ARI1P53111 347 aaKnown RBP3.06□□□□□ -1.92
SGD1YLR336C HUL5P53119 910 aa3.06□□□□□ -1.92
SGD1YLR336C YLR257WQ06146 321 aaKnown RBP3.06□□□□□ -1.92
SGD1YLR336C BDF2Q07442 638 aa3.06□□□□□ -1.92
SGD1YLR336C NFS1P25374 497 aa3.06□□□□□ -1.92
SGD1YLR336C SBA1P28707 216 aaKnown RBP3.06□□□□□ -1.92
SGD1YLR336C KIP1P28742 1111 aa3.06□□□□□ -1.92
SGD1YLR336C SRP40P32583 406 aaPredicted RBP3.06□□□□□ -1.92
SGD1YLR336C SMY2P32909 740 aaKnown RBP3.06□□□□□ -1.92
SGD1YLR336C GPB2P39717 880 aa3.06□□□□□ -1.92
SGD1YLR336C ALT1P52893 592 aa3.06□□□□□ -1.92
SGD1YLR336C YER152CP10356 443 aa3.05□□□□□ -1.92
SGD1YLR336C NNK1P36003 928 aa3.05□□□□□ -1.92
SGD1YLR336C RGD1P38339 666 aa3.05□□□□□ -1.92
SGD1YLR336C YHR020WP38708 688 aaKnown RBP3.05□□□□□ -1.92
SGD1YLR336C SKN7P38889 622 aa3.05□□□□□ -1.92
SGD1YLR336C MBP1P39678 833 aa3.05□□□□□ -1.92
SGD1YLR336C SIP5P40210 489 aaKnown RBP3.05□□□□□ -1.92
SGD1YLR336C VPS53P47061 822 aa3.05□□□□□ -1.92
SGD1YLR336C NAN1Q02931 896 aaKnown RBP3.05□□□□□ -1.92
SGD1YLR336C SHE9Q04172 456 aa3.05□□□□□ -1.92
SGD1YLR336C GIC2Q06648 383 aa3.05□□□□□ -1.92
SGD1YLR336C CDC53Q12018 815 aaKnown RBP3.05□□□□□ -1.92
SGD1YLR336C RKM4Q12504 494 aa3.05□□□□□ -1.92
SGD1YLR336C YKL107WP34251 309 aa3.05□□□□□ -1.92
SGD1YLR336C HSE1P38753 452 aa3.05□□□□□ -1.92
SGD1YLR336C AKR1P39010 764 aa3.05□□□□□ -1.92
SGD1YLR336C PFD1P46988 109 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms