RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C NUC1P08466 329 aa5.9□□□□□ -1.46
BUD28YLR062C SAM1P10659 382 aaKnown RBP5.9□□□□□ -1.46
BUD28YLR062C UTR4P32626 227 aa5.9□□□□□ -1.46
BUD28YLR062C TGL1P34163 548 aa5.9□□□□□ -1.46
BUD28YLR062C RER2P35196 286 aa5.9□□□□□ -1.46
BUD28YLR062C YKR018CP36114 725 aa5.9□□□□□ -1.46
BUD28YLR062C PHO88P38264 188 aaPredicted RBP5.9□□□□□ -1.46
BUD28YLR062C AIM21P40563 679 aa5.9□□□□□ -1.46
BUD28YLR062C PTK2P47116 818 aaKnown RBP5.9□□□□□ -1.46
BUD28YLR062C VPS30Q02948 557 aa5.9□□□□□ -1.46
BUD28YLR062C PML39Q03760 334 aa5.9□□□□□ -1.46
BUD28YLR062C TMA64Q04600 565 aaKnown RBP5.9□□□□□ -1.46
BUD28YLR062C FPR4Q06205 392 aaPredicted RBP5.9□□□□□ -1.46
BUD28YLR062C MET7Q08645 548 aa5.9□□□□□ -1.46
BUD28YLR062C NCR1Q12200 1170 aa5.9□□□□□ -1.46
BUD28YLR062C SUT2Q12286 268 aa5.9□□□□□ -1.46
BUD28YLR062C CDC19P00549 500 aaKnown RBP5.89□□□□□ -1.47
BUD28YLR062C RPP1BP10622 106 aaKnown RBP5.89□□□□□ -1.47
BUD28YLR062C RPL8BP29453 256 aaKnown RBP5.89□□□□□ -1.47
BUD28YLR062C RGT1P32862 1170 aa5.89□□□□□ -1.47
BUD28YLR062C LDH1P38139 375 aa5.89□□□□□ -1.47
BUD28YLR062C BRN1P38170 754 aa5.89□□□□□ -1.47
BUD28YLR062C YGR125WP53273 1036 aa5.89□□□□□ -1.47
BUD28YLR062C BRE5P53741 515 aaKnown RBP5.89□□□□□ -1.47
BUD28YLR062C RPT6Q01939 405 aaKnown RBP5.89□□□□□ -1.47
BUD28YLR062C BUL2Q03758 920 aaKnown RBP5.89□□□□□ -1.47
BUD28YLR062C MYO5Q04439 1219 aaKnown RBP5.89□□□□□ -1.47
BUD28YLR062C MAK31P23059 88 aa5.88□□□□□ -1.47
BUD28YLR062C SRP40P32583 406 aaPredicted RBP5.88□□□□□ -1.47
BUD28YLR062C SHP1P34223 423 aa5.88□□□□□ -1.47
BUD28YLR062C MAL31P38156 614 aa5.88□□□□□ -1.47
BUD28YLR062C TOM71P38825 639 aaKnown RBP5.88□□□□□ -1.47
BUD28YLR062C VPS45P38932 577 aa5.88□□□□□ -1.47
BUD28YLR062C AFG3P39925 761 aa5.88□□□□□ -1.47
BUD28YLR062C SPH1Q06160 661 aa5.88□□□□□ -1.47
BUD28YLR062C CSC1Q06538 782 aa5.88□□□□□ -1.47
BUD28YLR062C UTP4Q06679 776 aaKnown RBP5.88□□□□□ -1.47
BUD28YLR062C YOR131CQ12486 218 aa5.88□□□□□ -1.47
BUD28YLR062C SRP54P20424 541 aaKnown RBP5.87□□□□□ -1.47
BUD28YLR062C BCS1P32839 456 aa5.87□□□□□ -1.47
BUD28YLR062C CSM2P40465 213 aa5.87□□□□□ -1.47
BUD28YLR062C YJR107WP47145 328 aa5.87□□□□□ -1.47
BUD28YLR062C TFC6Q06339 672 aa5.87□□□□□ -1.47
BUD28YLR062C SUE1Q06524 206 aa5.87□□□□□ -1.47
BUD28YLR062C ECM30Q06673 1274 aa5.87□□□□□ -1.47
BUD28YLR062C CLF1Q12309 687 aaPredicted RBP5.87□□□□□ -1.47
BUD28YLR062C MDM20Q12387 796 aaKnown RBP5.87□□□□□ -1.47
BUD28YLR062C FKS1P38631 1876 aaKnown RBP5.86□□□□□ -1.47
BUD28YLR062C YUR1P26725 428 aa5.86□□□□□ -1.47
BUD28YLR062C PEP3P27801 918 aa5.86□□□□□ -1.47
BUD28YLR062C IMP2'P32351 346 aa5.86□□□□□ -1.47
BUD28YLR062C MCR1P36060 302 aaKnown RBP5.86□□□□□ -1.47
BUD28YLR062C UIP5P36137 443 aa5.86□□□□□ -1.47
BUD28YLR062C LEO1P38439 464 aa5.86□□□□□ -1.47
BUD28YLR062C CIC1P38779 376 aaKnown RBP5.86□□□□□ -1.47
BUD28YLR062C CLA4P48562 842 aa5.86□□□□□ -1.47
BUD28YLR062C HXT17P53631 564 aa5.86□□□□□ -1.47
BUD28YLR062C GCR2Q01722 534 aa5.86□□□□□ -1.47
BUD28YLR062C DUS3Q06053 668 aaKnown RBP5.86□□□□□ -1.47
BUD28YLR062C ERP3Q12403 225 aa5.86□□□□□ -1.47
BUD28YLR062C PGA3Q12746 312 aaKnown RBP5.86□□□□□ -1.47
BUD28YLR062C UBR2Q07963 1872 aa5.85□□□□□ -1.47
BUD28YLR062C YPR117WQ06116 2489 aa5.85□□□□□ -1.47
BUD28YLR062C TPM1P17536 199 aaKnown RBP5.85□□□□□ -1.47
BUD28YLR062C KSP1P38691 1029 aaKnown RBP5.85□□□□□ -1.47
BUD28YLR062C NDT80P38830 627 aa5.85□□□□□ -1.47
BUD28YLR062C MID1P41821 548 aa5.85□□□□□ -1.47
BUD28YLR062C YGL039WP53183 348 aaKnown RBP5.85□□□□□ -1.47
BUD28YLR062C MDM1Q01846 1127 aa5.85□□□□□ -1.47
BUD28YLR062C YPL034WQ03083 165 aa5.85□□□□□ -1.47
BUD28YLR062C SLD5Q03406 294 aa5.85□□□□□ -1.47
BUD28YLR062C EST2Q06163 884 aa5.85□□□□□ -1.47
BUD28YLR062C YDL129WQ07555 291 aa5.85□□□□□ -1.47
BUD28YLR062C GUD1Q07729 489 aa5.85□□□□□ -1.47
BUD28YLR062C MSC6Q08818 692 aaKnown RBP5.85□□□□□ -1.47
BUD28YLR062C PHR1P05066 565 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
BUD28YLR062C TKL1P23254 680 aaKnown RBP5.84□□□□□ -1.47
BUD28YLR062C MCM4P30665 933 aaKnown RBP5.84□□□□□ -1.47
BUD28YLR062C DBP7P36120 742 aaKnown RBP5.84□□□□□ -1.47
BUD28YLR062C HXT13P39924 564 aa5.84□□□□□ -1.47
BUD28YLR062C FIR1P40020 876 aa5.84□□□□□ -1.47
BUD28YLR062C ALG2P43636 503 aa5.84□□□□□ -1.47
BUD28YLR062C NUP42P49686 430 aaKnown RBP5.84□□□□□ -1.47
BUD28YLR062C SCS3P53012 380 aa5.84□□□□□ -1.47
BUD28YLR062C LSB1P53281 241 aa5.84□□□□□ -1.47
BUD28YLR062C YNR021WP53723 404 aaKnown RBP5.84□□□□□ -1.47
BUD28YLR062C ESF1Q06344 628 aaKnown RBP5.84□□□□□ -1.47
BUD28YLR062C DSE3Q08729 430 aa5.84□□□□□ -1.47
BUD28YLR062C TFC4P33339 1025 aa5.83□□□□□ -1.48
BUD28YLR062C WHI3P34761 661 aaKnown RBP5.83□□□□□ -1.48
BUD28YLR062C REG2P38232 338 aa5.83□□□□□ -1.48
BUD28YLR062C SAP30P38429 201 aa5.83□□□□□ -1.48
BUD28YLR062C NOC2P39744 710 aaKnown RBP5.83□□□□□ -1.48
BUD28YLR062C FMS1P50264 508 aa5.83□□□□□ -1.48
BUD28YLR062C ECM23Q02710 187 aa5.83□□□□□ -1.48
BUD28YLR062C FMP30Q02883 468 aa5.83□□□□□ -1.48
BUD28YLR062C YMR321CQ04898 105 aa5.83□□□□□ -1.48
BUD28YLR062C ISA1Q07821 250 aaPredicted RBP5.83□□□□□ -1.48
BUD28YLR062C AIR2Q12476 344 aaKnown RBP5.83□□□□□ -1.48
BUD28YLR062C YDR461C-AQ2V2P7 80 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms