RNA–Protein interactions for RNA: YKL201C

MNN4, Transcript of Putative positive regulator of mannosylphosphate transferase Mnn6p, yeast

Gene MNN4, Length 3,537 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MNN4	YKL201C	TIM23	P32897	222 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	SLI15	P38283	698 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	RPN10	P38886	268 aa	Known RBP	4.92	□□□□□ -1.62
MNN4	YKL201C	SQS1	P53866	767 aa	Known RBP	4.92	□□□□□ -1.62
MNN4	YKL201C	YOR111W	Q99210	232 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	ETP1	P38748	585 aa	Known RBP	4.92	□□□□□ -1.62
MNN4	YKL201C	CST9	Q06032	482 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	MRD1	Q06106	887 aa	Known RBP	4.92	□□□□□ -1.62
MNN4	YKL201C	MAM3	Q12296	706 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	CDC6	P09119	513 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	ALD6	P54115	500 aa	Known RBP	4.92	□□□□□ -1.62
MNN4	YKL201C	VPS30	Q02948	557 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	SPH1	Q06160	661 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	HIF1	Q12373	385 aa		4.92	□□□□□ -1.62
MNN4	YKL201C	SSA4	P22202	642 aa	Known RBP	4.91	□□□□□ -1.62
MNN4	YKL201C	RDS1	P25611	832 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	URA1	P28272	314 aa	Predicted RBP	4.91	□□□□□ -1.62
MNN4	YKL201C	RPL8B	P29453	256 aa	Known RBP	4.91	□□□□□ -1.62
MNN4	YKL201C	HIR1	P32479	840 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	OCA5	P38738	679 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	AIM21	P40563	679 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	VPS4	P52917	437 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	PEX14	P53112	341 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	PTA1	Q01329	785 aa	Predicted RBP	4.91	□□□□□ -1.62
MNN4	YKL201C	UBX5	Q06682	500 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
MNN4	YKL201C	GAP1	P19145	602 aa	Predicted RBP	4.91	□□□□□ -1.62
MNN4	YKL201C	OCT1	P35999	772 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	NUP82	P40368	713 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	RTS3	P53289	263 aa		4.91	□□□□□ -1.62
MNN4	YKL201C	WHI4	Q07655	649 aa	Known RBP	4.91	□□□□□ -1.62
MNN4	YKL201C	TY1B-A	O13527	1196 aa	Known RBP	4.9	□□□□□ -1.62
MNN4	YKL201C	FRS2	P15625	503 aa	Known RBP	4.9	□□□□□ -1.62
MNN4	YKL201C	YBL028C	P38202	106 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	BSD2	P38356	321 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	BCD1	P38772	366 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	CCT5	P40413	562 aa	Known RBP	4.9	□□□□□ -1.62
MNN4	YKL201C	YDR341C	Q05506	607 aa	Known RBP	4.9	□□□□□ -1.62
MNN4	YKL201C	VPS8	P39702	1274 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	ACA1	P39970	489 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	TPM2	P40414	161 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	LYS14	P40971	790 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	GSM1	P42950	618 aa		4.9	□□□□□ -1.62
MNN4	YKL201C	OYE2	Q03558	400 aa	Known RBP	4.9	□□□□□ -1.62
MNN4	YKL201C	RME1	P32338	300 aa	Known RBP	4.9	□□□□□ -1.63
MNN4	YKL201C	RPN12	P32496	274 aa		4.9	□□□□□ -1.63
MNN4	YKL201C	YKR018C	P36114	725 aa		4.9	□□□□□ -1.63
MNN4	YKL201C	VPS45	P38932	577 aa		4.9	□□□□□ -1.63
MNN4	YKL201C	STT3	P39007	718 aa	Known RBP	4.9	□□□□□ -1.63
MNN4	YKL201C	GPB2	P39717	880 aa		4.9	□□□□□ -1.63
MNN4	YKL201C	VID28	P40547	921 aa		4.9	□□□□□ -1.63
MNN4	YKL201C	MFM1	Q02783	413 aa		4.9	□□□□□ -1.63
MNN4	YKL201C	PDR1	P12383	1068 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	YKT6	P36015	200 aa	Known RBP	4.89	□□□□□ -1.63
MNN4	YKL201C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
MNN4	YKL201C	BUD6	P41697	788 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	RTC4	P53850	401 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	YPR148C	Q06523	435 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	SRF1	Q12516	437 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	PRP22	P24384	1145 aa	Known RBP	4.89	□□□□□ -1.63
MNN4	YKL201C	IMP2'	P32351	346 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	VAB2	P40003	282 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	TMA64	Q04600	565 aa	Known RBP	4.89	□□□□□ -1.63
MNN4	YKL201C	TSR3	Q12094	313 aa	Known RBP	4.89	□□□□□ -1.63
MNN4	YKL201C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
MNN4	YKL201C	KNS1	P32350	737 aa	Predicted RBP	4.89	□□□□□ -1.63
MNN4	YKL201C	RSM25	P40496	264 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	YAF9	P53930	226 aa		4.89	□□□□□ -1.63
MNN4	YKL201C	THS1	P04801	734 aa	Known RBP	4.88	□□□□□ -1.63
MNN4	YKL201C	RAD18	P10862	487 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	YDJ1	P25491	409 aa	Known RBP	4.88	□□□□□ -1.63
MNN4	YKL201C	RFC5	P38251	354 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	TCO89	Q08921	799 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	VPS1	P21576	704 aa	Known RBP	4.88	□□□□□ -1.63
MNN4	YKL201C	PHO88	P38264	188 aa	Predicted RBP	4.88	□□□□□ -1.63
MNN4	YKL201C	VPS29	P38759	282 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	GAA1	P39012	614 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	LSB1	P53281	241 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	SEC5	P89102	971 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	YML037C	Q03703	340 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	THR4	P16120	514 aa	Known RBP	4.88	□□□□□ -1.63
MNN4	YKL201C	PKC1	P24583	1151 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	SCJ1	P25303	377 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	SEC8	P32855	1065 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	RVS167	P39743	482 aa	Known RBP	4.88	□□□□□ -1.63
MNN4	YKL201C	UBP9	P39967	754 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	TY3A-G	Q12173	290 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	TY3A-I	Q99219	290 aa		4.88	□□□□□ -1.63
MNN4	YKL201C	RKM3	P38222	552 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	VHR2	P40041	505 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	ASE1	P50275	885 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	RBA50	Q04418	439 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	MMR1	Q06324	491 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	YOR296W	Q08748	1289 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	CIT1	P00890	479 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	NPR3	P38742	1146 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	MXR1	P40029	184 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	EPL1	P43572	832 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	YGR125W	P53273	1036 aa		4.87	□□□□□ -1.63
MNN4	YKL201C	BUL2	Q03758	920 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 289.2 ms