RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W RDH54P38086 958 aa5.36□□□□□ -1.55
CAP1YKL007W XKS1P42826 600 aa5.36□□□□□ -1.55
CAP1YKL007W ALT1P52893 592 aa5.36□□□□□ -1.55
CAP1YKL007W ALO1P54783 526 aaKnown RBP5.36□□□□□ -1.55
CAP1YKL007W CYC7P00045 113 aa5.35□□□□□ -1.55
CAP1YKL007W PIC2P40035 300 aa5.35□□□□□ -1.55
CAP1YKL007W ENT3P47160 408 aa5.35□□□□□ -1.55
CAP1YKL007W TRP3P00937 484 aa5.34□□□□□ -1.55
CAP1YKL007W MCM2P29469 868 aa5.34□□□□□ -1.55
CAP1YKL007W WHI3P34761 661 aaKnown RBP5.34□□□□□ -1.55
CAP1YKL007W VPS53P47061 822 aa5.34□□□□□ -1.55
CAP1YKL007W RCM1P53972 490 aa5.34□□□□□ -1.55
CAP1YKL007W EST2Q06163 884 aa5.34□□□□□ -1.55
CAP1YKL007W NAP1P25293 417 aaKnown RBP5.33□□□□□ -1.56
CAP1YKL007W PEP7P32609 515 aa5.33□□□□□ -1.56
CAP1YKL007W YKR073CP36153 106 aa5.33□□□□□ -1.56
CAP1YKL007W TOS1P38288 455 aa5.33□□□□□ -1.56
CAP1YKL007W INP52P50942 1183 aa5.33□□□□□ -1.56
CAP1YKL007W OYE2Q03558 400 aaKnown RBP5.33□□□□□ -1.56
CAP1YKL007W HRK1Q08732 759 aaKnown RBP5.33□□□□□ -1.56
CAP1YKL007W RET1P22276 1149 aaKnown RBP5.32□□□□□ -1.56
CAP1YKL007W PUB1P32588 453 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
CAP1YKL007W FYV10P40492 516 aa5.32□□□□□ -1.56
CAP1YKL007W YNR063WP53749 607 aa5.32□□□□□ -1.56
CAP1YKL007W SPR28Q04921 423 aa5.32□□□□□ -1.56
CAP1YKL007W LIP5P32875 414 aa5.31□□□□□ -1.56
CAP1YKL007W SIW14P53965 281 aa5.31□□□□□ -1.56
CAP1YKL007W RSA3Q05942 220 aaKnown RBP5.31□□□□□ -1.56
CAP1YKL007W YLR257WQ06146 321 aaKnown RBP5.31□□□□□ -1.56
CAP1YKL007W PUS7Q08647 676 aaKnown RBP5.31□□□□□ -1.56
CAP1YKL007W HEM13P11353 328 aaKnown RBP5.3□□□□□ -1.56
CAP1YKL007W RAD27P26793 382 aa5.3□□□□□ -1.56
CAP1YKL007W QNS1P38795 714 aaKnown RBP5.3□□□□□ -1.56
CAP1YKL007W NRD1P53617 575 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
CAP1YKL007W TPP1Q03796 238 aa5.3□□□□□ -1.56
CAP1YKL007W SVF1Q05515 481 aa5.29□□□□□ -1.56
CAP1YKL007W HDA2Q06629 674 aa5.29□□□□□ -1.56
CAP1YKL007W MRL1Q06815 381 aa5.29□□□□□ -1.56
CAP1YKL007W BRE4Q07660 1125 aa5.29□□□□□ -1.56
CAP1YKL007W YVC1Q12324 675 aa5.29□□□□□ -1.56
CAP1YKL007W MNR2P35724 969 aa5.28□□□□□ -1.56
CAP1YKL007W OYE3P41816 400 aaPredicted RBP5.28□□□□□ -1.56
CAP1YKL007W EAR1Q03212 550 aa5.28□□□□□ -1.56
CAP1YKL007W MAG2Q06436 670 aaKnown RBP5.28□□□□□ -1.56
CAP1YKL007W TRE1Q08919 783 aa5.28□□□□□ -1.56
CAP1YKL007W RTT10Q08924 1013 aa5.28□□□□□ -1.56
CAP1YKL007W TMA46Q12000 345 aaKnown RBP5.28□□□□□ -1.56
CAP1YKL007W GCR1P07261 785 aa5.27□□□□□ -1.57
CAP1YKL007W ADP1P25371 1049 aa5.27□□□□□ -1.57
CAP1YKL007W PET112P33893 541 aa5.27□□□□□ -1.57
CAP1YKL007W SNU71P53207 620 aaKnown RBP5.27□□□□□ -1.57
CAP1YKL007W PTC5Q12511 572 aa5.27□□□□□ -1.57
CAP1YKL007W DED1P06634 604 aaKnown RBP5.26□□□□□ -1.57
CAP1YKL007W GCD1P09032 578 aaPredicted RBP5.26□□□□□ -1.57
CAP1YKL007W ROD1Q02805 837 aa5.26□□□□□ -1.57
CAP1YKL007W YPL260WQ08977 551 aa5.26□□□□□ -1.57
CAP1YKL007W MDL2P33311 773 aa5.25□□□□□ -1.57
CAP1YKL007W ALG3P38179 458 aa5.25□□□□□ -1.57
CAP1YKL007W YHL012WP38709 493 aa5.25□□□□□ -1.57
CAP1YKL007W CTH1P47976 325 aa5.25□□□□□ -1.57
CAP1YKL007W CLN2P20438 545 aa5.24□□□□□ -1.57
CAP1YKL007W SRO9P25567 434 aaKnown RBP5.24□□□□□ -1.57
CAP1YKL007W SYP1P25623 870 aaKnown RBP5.24□□□□□ -1.57
CAP1YKL007W MKK2P32491 506 aa5.24□□□□□ -1.57
CAP1YKL007W AFG2P32794 780 aa5.24□□□□□ -1.57
CAP1YKL007W PEX7P39108 375 aa5.24□□□□□ -1.57
CAP1YKL007W HXT13P39924 564 aa5.24□□□□□ -1.57
CAP1YKL007W GNP1P48813 663 aa5.24□□□□□ -1.57
CAP1YKL007W HXT17P53631 564 aa5.24□□□□□ -1.57
CAP1YKL007W HXT15P54854 567 aa5.24□□□□□ -1.57
CAP1YKL007W SDH1Q00711 640 aa5.24□□□□□ -1.57
CAP1YKL007W COQ4O13525 335 aa5.23□□□□□ -1.57
CAP1YKL007W KIP1P28742 1111 aa5.23□□□□□ -1.57
CAP1YKL007W PRO1P32264 428 aa5.23□□□□□ -1.57
CAP1YKL007W YSC84P32793 468 aa5.23□□□□□ -1.57
CAP1YKL007W RGD1P38339 666 aa5.23□□□□□ -1.57
CAP1YKL007W RPN3P40016 523 aaKnown RBP5.23□□□□□ -1.57
CAP1YKL007W YJL045WP47052 634 aa5.23□□□□□ -1.57
CAP1YKL007W ORC3P54790 616 aa5.23□□□□□ -1.57
CAP1YKL007W SSY1Q03770 852 aa5.23□□□□□ -1.57
CAP1YKL007W NBA1Q08229 501 aaKnown RBP5.23□□□□□ -1.57
CAP1YKL007W CDC34P14682 295 aa5.22□□□□□ -1.57
CAP1YKL007W CCZ1P38273 704 aa5.22□□□□□ -1.57
CAP1YKL007W CNN1P43618 361 aa5.22□□□□□ -1.57
CAP1YKL007W TNA1P53322 534 aa5.22□□□□□ -1.57
CAP1YKL007W HOS3Q02959 697 aaKnown RBP5.22□□□□□ -1.57
CAP1YKL007W SAM35P14693 329 aa5.21□□□□□ -1.58
CAP1YKL007W DBP5P20449 482 aaKnown RBP5.21□□□□□ -1.58
CAP1YKL007W PTC7P38797 343 aa5.21□□□□□ -1.58
CAP1YKL007W NMD3P38861 518 aaKnown RBP5.21□□□□□ -1.58
CAP1YKL007W KRI1P42846 591 aaKnown RBP5.21□□□□□ -1.58
CAP1YKL007W ECL1P48235 211 aa5.21□□□□□ -1.58
CAP1YKL007W FOL2P51601 243 aaKnown RBP5.21□□□□□ -1.58
CAP1YKL007W RAT1Q02792 1006 aaKnown RBP5.21□□□□□ -1.58
CAP1YKL007W SPO21Q12411 609 aa5.21□□□□□ -1.58
CAP1YKL007W PUF4P25339 888 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58 RIP-Chip
CAP1YKL007W HSP78P33416 811 aa5.2□□□□□ -1.58
CAP1YKL007W RER2P35196 286 aa5.2□□□□□ -1.58
CAP1YKL007W MET10P39692 1035 aa5.2□□□□□ -1.58
CAP1YKL007W GTS1P40956 396 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms