RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W MTC1P47018 478 aaKnown RBP12.74□□□□□ -0.37
CAP1YKL007W DRS1P32892 752 aaKnown RBP12.44□□□□□ -0.42
CAP1YKL007W FAP1P53971 965 aa11.66□□□□□ -0.54
CAP1YKL007W PRY3P47033 881 aa11□□□□□ -0.65
CAP1YKL007W DIP2Q12220 943 aaPredicted RBP10.72□□□□□ -0.69
CAP1YKL007W BFR2Q06631 534 aaKnown RBP10.61□□□□□ -0.71
CAP1YKL007W ISW2Q08773 1120 aa10.51□□□□□ -0.73
CAP1YKL007W AAD16Q02895 342 aa10.48□□□□□ -0.73
CAP1YKL007W AVT3P36062 692 aa10.45□□□□□ -0.74
CAP1YKL007W PRI1P10363 409 aa10.44□□□□□ -0.74
CAP1YKL007W RPG1P38249 964 aaKnown RBP10.32□□□□□ -0.76
CAP1YKL007W YCK3P39962 524 aa10.32□□□□□ -0.76
CAP1YKL007W RSE1Q04693 1361 aaKnown RBP10.25□□□□□ -0.77
CAP1YKL007W HAA1Q12753 694 aaKnown RBP10.24□□□□□ -0.77
CAP1YKL007W TSR3Q12094 313 aaKnown RBP9.87□□□□□ -0.83
CAP1YKL007W RPL17AP05740 184 aaKnown RBP9.85□□□□□ -0.83
CAP1YKL007W RPL17BP46990 184 aaKnown RBP9.85□□□□□ -0.83
CAP1YKL007W REB1P21538 810 aa9.79□□□□□ -0.84
CAP1YKL007W TFA1P36100 482 aa9.75□□□□□ -0.85
CAP1YKL007W MRPL32P25348 183 aa9.56□□□□□ -0.88
CAP1YKL007W SPT21P35209 758 aa9.43□□□□□ -0.9
CAP1YKL007W YGL015CP33199 130 aa9.3□□□□□ -0.92
CAP1YKL007W RIM101P33400 625 aa9.26□□□□□ -0.93
CAP1YKL007W YKR023WP36119 530 aaKnown RBP9.2□□□□□ -0.94
CAP1YKL007W CDC27P38042 758 aa9.08□□□□□ -0.96
CAP1YKL007W TFC8Q12308 588 aa9.04□□□□□ -0.96
CAP1YKL007W HOP09932 586 aa9.01□□□□□ -0.97
CAP1YKL007W BUD31P25337 157 aaPredicted RBP8.94□□□□□ -0.98
CAP1YKL007W OXP1P28273 1286 aa8.92□□□□□ -0.98
CAP1YKL007W DCD1P06773 312 aa8.91□□□□□ -0.98
CAP1YKL007W YIL055CP40523 627 aaKnown RBP8.89□□□□□ -0.99
CAP1YKL007W UBP10P53874 792 aaPredicted RBP8.85□□□□□ -0.99
CAP1YKL007W PTP3P40048 928 aa8.82□□□□□ -1
CAP1YKL007W BCH2P36122 765 aa8.75□□□□□ -1.01
CAP1YKL007W MAP2P38174 421 aaKnown RBP8.75□□□□□ -1.01
CAP1YKL007W YAH1Q12184 172 aaKnown RBP8.75□□□□□ -1.01
CAP1YKL007W RSM7P47150 247 aa8.73□□□□□ -1.01
CAP1YKL007W SSP1P38871 571 aa8.7□□□□□ -1.02
CAP1YKL007W SCY1P53009 804 aa8.69□□□□□ -1.02
CAP1YKL007W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
CAP1YKL007W YLR271WQ06152 274 aa8.63□□□□□ -1.03
CAP1YKL007W BBC1P47068 1157 aa8.62□□□□□ -1.03
CAP1YKL007W SLX5P32828 619 aaKnown RBP8.59□□□□□ -1.03
CAP1YKL007W AI2P03876 854 aa8.58□□□□□ -1.04
CAP1YKL007W EPS1P40557 701 aa8.58□□□□□ -1.04
CAP1YKL007W BDF1P35817 686 aa8.53□□□□□ -1.04
CAP1YKL007W TIF4632P39936 914 aaKnown RBP8.53□□□□□ -1.04
CAP1YKL007W TGL3P40308 642 aa8.46□□□□□ -1.06
CAP1YKL007W MGA2P40578 1113 aa8.46□□□□□ -1.06
CAP1YKL007W PSD2P53037 1138 aaKnown RBP8.45□□□□□ -1.06
CAP1YKL007W SIS1P25294 352 aaKnown RBP8.43□□□□□ -1.06
CAP1YKL007W UBP9P39967 754 aa8.32□□□□□ -1.08
CAP1YKL007W CST9Q06032 482 aa8.32□□□□□ -1.08
CAP1YKL007W MRM1P25270 412 aa8.29□□□□□ -1.08
CAP1YKL007W NSR1P27476 414 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
CAP1YKL007W RTG3P38165 486 aa8.21□□□□□ -1.1
CAP1YKL007W YAP5P40574 245 aa8.19□□□□□ -1.1
CAP1YKL007W YOR238WQ08634 303 aa8.17□□□□□ -1.1
CAP1YKL007W MST1P07236 462 aa8.13□□□□□ -1.11
CAP1YKL007W YMR1P47147 688 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
CAP1YKL007W VPS29P38759 282 aa8.08□□□□□ -1.12
CAP1YKL007W RCR1P38212 213 aa8.05□□□□□ -1.12
CAP1YKL007W RQC2Q12532 1038 aaKnown RBP8.03□□□□□ -1.12
CAP1YKL007W DBP1P24784 617 aaKnown RBP8.02□□□□□ -1.13
CAP1YKL007W GTT3P39996 337 aa8□□□□□ -1.13
CAP1YKL007W RAM2P29703 316 aa7.99□□□□□ -1.13
CAP1YKL007W MAK11P20484 414 aaKnown RBP7.97□□□□□ -1.13
CAP1YKL007W STS1P38637 319 aa7.97□□□□□ -1.13
CAP1YKL007W PIB1Q06651 286 aa7.96□□□□□ -1.14
CAP1YKL007W YFR006WP43590 535 aa7.95□□□□□ -1.14
CAP1YKL007W VMA1P17255 1071 aaKnown RBP7.89□□□□□ -1.15
CAP1YKL007W YBL029C-AQ3E756 94 aa7.87□□□□□ -1.15
CAP1YKL007W DMA1P38823 416 aa7.86□□□□□ -1.15
CAP1YKL007W WSC3Q12215 556 aa7.86□□□□□ -1.15
CAP1YKL007W VNX1P42839 908 aa7.85□□□□□ -1.15
CAP1YKL007W SAM3Q08986 587 aa7.85□□□□□ -1.15
CAP1YKL007W MSB4Q12317 492 aa7.85□□□□□ -1.15
CAP1YKL007W MIF2P35201 549 aa7.84□□□□□ -1.15
CAP1YKL007W NOP53Q12080 455 aaKnown RBP7.84□□□□□ -1.15
CAP1YKL007W COQ8P27697 501 aa7.83□□□□□ -1.16
CAP1YKL007W SPP1Q03012 353 aa7.81□□□□□ -1.16
CAP1YKL007W EAP1P36041 632 aaKnown RBP7.8□□□□□ -1.16
CAP1YKL007W YOL036WQ08206 761 aa7.8□□□□□ -1.16
CAP1YKL007W ABP1P15891 592 aaKnown RBP7.79□□□□□ -1.16
CAP1YKL007W SET1P38827 1080 aaKnown RBP7.79□□□□□ -1.16
CAP1YKL007W TIF11P38912 153 aaKnown RBP7.79□□□□□ -1.16
CAP1YKL007W GYP5Q12344 894 aa7.78□□□□□ -1.16
CAP1YKL007W SET4P42948 560 aa7.77□□□□□ -1.17
CAP1YKL007W PTC3P34221 468 aaKnown RBP7.76□□□□□ -1.17
CAP1YKL007W EDS1P38073 919 aa7.76□□□□□ -1.17
CAP1YKL007W GRE2Q12068 342 aaKnown RBP7.76□□□□□ -1.17
CAP1YKL007W IFH1P39520 1085 aa7.75□□□□□ -1.17
CAP1YKL007W ULI1P43604 169 aa7.73□□□□□ -1.17
CAP1YKL007W ATH1P48016 1211 aa7.73□□□□□ -1.17
CAP1YKL007W GUT1P32190 709 aa7.71□□□□□ -1.18
CAP1YKL007W HTA1P04911 132 aaKnown RBP7.7□□□□□ -1.18
CAP1YKL007W HTA2P04912 132 aa7.7□□□□□ -1.18
CAP1YKL007W DCW1P36091 449 aa7.68□□□□□ -1.18
CAP1YKL007W TRP5P00931 707 aaKnown RBP7.67□□□□□ -1.18
CAP1YKL007W IOC2Q12072 812 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms