RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W COQ1P18900 473 aa7.04□□□□□ -1.28
GEF1YJR040W MGA2P40578 1113 aa7.04□□□□□ -1.28
GEF1YJR040W RPS15Q01855 142 aaKnown RBP7.04□□□□□ -1.28
GEF1YJR040W HCA4P20448 770 aaKnown RBP7.04□□□□□ -1.28
GEF1YJR040W MCM4P30665 933 aaKnown RBP7.04□□□□□ -1.28
GEF1YJR040W SLI15P38283 698 aa7.04□□□□□ -1.28
GEF1YJR040W TFG2P41896 400 aaPredicted RBP7.04□□□□□ -1.28
GEF1YJR040W SEN54Q02825 467 aaPredicted RBP7.04□□□□□ -1.28
GEF1YJR040W YLR278CQ05854 1341 aa7.03□□□□□ -1.28
GEF1YJR040W YKT6P36015 200 aaKnown RBP7.03□□□□□ -1.28
GEF1YJR040W PSY4P38193 441 aa7.03□□□□□ -1.28
GEF1YJR040W RIO2P40160 425 aaKnown RBP7.03□□□□□ -1.28
GEF1YJR040W UFD2P54860 961 aa7.03□□□□□ -1.28
GEF1YJR040W YLR407WQ06070 228 aa7.03□□□□□ -1.28
GEF1YJR040W MRD1Q06106 887 aaKnown RBP7.03□□□□□ -1.28
GEF1YJR040W RAD61Q99359 647 aa7.03□□□□□ -1.28
GEF1YJR040W HXK1P04806 485 aaKnown RBP7.02□□□□□ -1.28
GEF1YJR040W MPH3P0CE00 602 aa7.02□□□□□ -1.28
GEF1YJR040W YGR117CP53270 476 aa7.02□□□□□ -1.28
GEF1YJR040W TRM44Q02648 567 aaKnown RBP7.02□□□□□ -1.28
GEF1YJR040W TMA16Q08687 178 aa7.02□□□□□ -1.28
GEF1YJR040W CLF1Q12309 687 aaPredicted RBP7.02□□□□□ -1.28
GEF1YJR040W SEC14P24280 304 aaKnown RBP7.02□□□□□ -1.29
GEF1YJR040W RER2P35196 286 aa7.02□□□□□ -1.29
GEF1YJR040W UTP7P40055 554 aaKnown RBP7.02□□□□□ -1.29
GEF1YJR040W SNU71P53207 620 aaKnown RBP7.02□□□□□ -1.29
GEF1YJR040W ECM23Q02710 187 aa7.02□□□□□ -1.29
GEF1YJR040W ERV41Q04651 352 aa7.02□□□□□ -1.29
GEF1YJR040W DPH5P32469 300 aaPredicted RBP7.01□□□□□ -1.29
GEF1YJR040W MYO3P36006 1272 aa7.01□□□□□ -1.29
GEF1YJR040W FET4P40988 552 aa7.01□□□□□ -1.29
GEF1YJR040W ALG2P43636 503 aa7.01□□□□□ -1.29
GEF1YJR040W STR2P47164 639 aa7.01□□□□□ -1.29
GEF1YJR040W EST2Q06163 884 aa7.01□□□□□ -1.29
GEF1YJR040W KEL3Q08979 651 aaPredicted RBP7.01□□□□□ -1.29
GEF1YJR040W PDC1P06169 563 aaKnown RBP7.01□□□□□ -1.29
GEF1YJR040W SAC6P32599 642 aaKnown RBP7.01□□□□□ -1.29
GEF1YJR040W APT1P49435 187 aaKnown RBP7.01□□□□□ -1.29
GEF1YJR040W MTC3P53077 123 aa7.01□□□□□ -1.29
GEF1YJR040W PXR1P53335 271 aaPredicted RBP7.01□□□□□ -1.29
GEF1YJR040W VPS75P53853 264 aa7.01□□□□□ -1.29
GEF1YJR040W RBA50Q04418 439 aa7.01□□□□□ -1.29
GEF1YJR040W RRP15Q06511 250 aaPredicted RBP7.01□□□□□ -1.29
GEF1YJR040W YCG1Q06680 1035 aa7.01□□□□□ -1.29
GEF1YJR040W SLP1Q12232 587 aa7.01□□□□□ -1.29
GEF1YJR040W PGI1P12709 554 aaKnown RBP7□□□□□ -1.29
GEF1YJR040W OLA1P38219 394 aaKnown RBP7□□□□□ -1.29
GEF1YJR040W EMP47P43555 445 aa7□□□□□ -1.29
GEF1YJR040W PFK2P16862 959 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
GEF1YJR040W DIT2P21595 489 aa7□□□□□ -1.29
GEF1YJR040W ANP1P32629 500 aa7□□□□□ -1.29
GEF1YJR040W RFT1P38206 574 aaPredicted RBP7□□□□□ -1.29
GEF1YJR040W YHL050CP38721 697 aa7□□□□□ -1.29
GEF1YJR040W FAR11P53917 953 aa7□□□□□ -1.29
GEF1YJR040W OMS1Q06668 471 aa7□□□□□ -1.29
GEF1YJR040W RLP24Q07915 199 aaKnown RBP7□□□□□ -1.29
GEF1YJR040W MCM16Q12262 181 aa7□□□□□ -1.29
GEF1YJR040W REI1P38344 393 aaPredicted RBP6.99□□□□□ -1.29
GEF1YJR040W TPS3P38426 1054 aaKnown RBP6.99□□□□□ -1.29
GEF1YJR040W NSG2P53898 299 aa6.99□□□□□ -1.29
GEF1YJR040W YDR338CQ05497 695 aa6.99□□□□□ -1.29
GEF1YJR040W YSH1Q06224 779 aaPredicted RBP6.99□□□□□ -1.29
GEF1YJR040W GAL2P13181 574 aa6.99□□□□□ -1.29
GEF1YJR040W KIN1P13185 1064 aa6.99□□□□□ -1.29
GEF1YJR040W UBC1P21734 215 aaKnown RBP6.99□□□□□ -1.29
GEF1YJR040W STE11P23561 717 aa6.99□□□□□ -1.29
GEF1YJR040W SEC20P28791 383 aa6.99□□□□□ -1.29
GEF1YJR040W ASF1P32447 279 aa6.99□□□□□ -1.29
GEF1YJR040W RRP14P36080 434 aaKnown RBP6.99□□□□□ -1.29
GEF1YJR040W RPN10P38886 268 aaKnown RBP6.99□□□□□ -1.29
GEF1YJR040W CAJ1P39101 391 aa6.99□□□□□ -1.29
GEF1YJR040W VID27P40157 782 aa6.99□□□□□ -1.29
GEF1YJR040W YJR142WP47173 342 aa6.99□□□□□ -1.29
GEF1YJR040W AFT2Q08957 416 aa6.99□□□□□ -1.29
GEF1YJR040W YOL098CQ12496 1037 aa6.99□□□□□ -1.29
GEF1YJR040W CHO2P05374 869 aaKnown RBP6.98□□□□□ -1.29
GEF1YJR040W HPR1P17629 752 aaKnown RBP6.98□□□□□ -1.29
GEF1YJR040W MAK11P20484 414 aaKnown RBP6.98□□□□□ -1.29
GEF1YJR040W SRM1P21827 482 aa6.98□□□□□ -1.29
GEF1YJR040W PRE8P23639 250 aa6.98□□□□□ -1.29
GEF1YJR040W HEL1P36113 551 aa6.98□□□□□ -1.29
GEF1YJR040W STV1P37296 890 aa6.98□□□□□ -1.29
GEF1YJR040W DSF2P38213 736 aa6.98□□□□□ -1.29
GEF1YJR040W NDC80P40460 691 aa6.98□□□□□ -1.29
GEF1YJR040W SEC26P41810 973 aaKnown RBP6.98□□□□□ -1.29
GEF1YJR040W SFH1Q06168 426 aa6.98□□□□□ -1.29
GEF1YJR040W SKG3Q06315 1026 aa6.98□□□□□ -1.29
GEF1YJR040W THS1P04801 734 aaKnown RBP6.98□□□□□ -1.29
GEF1YJR040W CBP3P21560 335 aa6.98□□□□□ -1.29
GEF1YJR040W ADP1P25371 1049 aa6.98□□□□□ -1.29
GEF1YJR040W CDC60P26637 1090 aaKnown RBP6.98□□□□□ -1.29
GEF1YJR040W YME2P32843 850 aa6.98□□□□□ -1.29
GEF1YJR040W CST26P38226 397 aa6.98□□□□□ -1.29
GEF1YJR040W SEC9P40357 651 aa6.98□□□□□ -1.29
GEF1YJR040W NIT1P40447 199 aa6.98□□□□□ -1.29
GEF1YJR040W SPO19Q03029 223 aa6.98□□□□□ -1.29
GEF1YJR040W HCR1Q05775 265 aaKnown RBP6.98□□□□□ -1.29
GEF1YJR040W SDH5Q08230 162 aa6.98□□□□□ -1.29
GEF1YJR040W AIM7Q12156 149 aa6.98□□□□□ -1.29
GEF1YJR040W RAD53P22216 821 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms