RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W SRO9P25567 434 aaKnown RBP5.35□□□□□ -1.55
RPF1YHR088W YHL012WP38709 493 aa5.35□□□□□ -1.55
RPF1YHR088W YHL050CP38721 697 aa5.35□□□□□ -1.55
RPF1YHR088W YHR219WP38900 624 aa5.35□□□□□ -1.55
RPF1YHR088W YLR257WQ06146 321 aaKnown RBP5.35□□□□□ -1.55
RPF1YHR088W OXR1Q08952 273 aa5.35□□□□□ -1.55
RPF1YHR088W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
RPF1YHR088W SQT1P35184 431 aa5.34□□□□□ -1.55
RPF1YHR088W VPS53P47061 822 aa5.34□□□□□ -1.55
RPF1YHR088W RSM26P47141 266 aa5.34□□□□□ -1.55
RPF1YHR088W RSA3Q05942 220 aaKnown RBP5.34□□□□□ -1.55
RPF1YHR088W ESC8Q08119 714 aa5.34□□□□□ -1.55
RPF1YHR088W SAM35P14693 329 aa5.33□□□□□ -1.56
RPF1YHR088W YKL222CP35995 705 aa5.33□□□□□ -1.56
RPF1YHR088W XKS1P42826 600 aa5.33□□□□□ -1.56
RPF1YHR088W ULP1Q02724 621 aa5.33□□□□□ -1.56
RPF1YHR088W TAF13P11747 167 aa5.32□□□□□ -1.56
RPF1YHR088W THI80P35202 319 aa5.32□□□□□ -1.56
RPF1YHR088W SSF1P38789 453 aaPredicted RBP5.32□□□□□ -1.56
RPF1YHR088W GTS1P40956 396 aa5.32□□□□□ -1.56
RPF1YHR088W RIM8P53179 542 aa5.32□□□□□ -1.56
RPF1YHR088W MRPL22P53881 309 aa5.32□□□□□ -1.56
RPF1YHR088W PEX13P80667 386 aa5.32□□□□□ -1.56
RPF1YHR088W ADD66P36040 267 aa5.31□□□□□ -1.56
RPF1YHR088W DAL4Q04895 635 aa5.31□□□□□ -1.56
RPF1YHR088W NBA1Q08229 501 aaKnown RBP5.31□□□□□ -1.56
RPF1YHR088W RDH54P38086 958 aa5.3□□□□□ -1.56
RPF1YHR088W QNS1P38795 714 aaKnown RBP5.3□□□□□ -1.56
RPF1YHR088W PEX28P38848 579 aa5.3□□□□□ -1.56
RPF1YHR088W SNO2P53823 222 aa5.3□□□□□ -1.56
RPF1YHR088W ADI1Q03677 179 aa5.3□□□□□ -1.56
RPF1YHR088W MSC6Q08818 692 aaKnown RBP5.3□□□□□ -1.56
RPF1YHR088W SOD2P00447 233 aa5.29□□□□□ -1.56
RPF1YHR088W SEC20P28791 383 aa5.29□□□□□ -1.56
RPF1YHR088W MET4P32389 672 aa5.28□□□□□ -1.56
RPF1YHR088W DAK2P43550 591 aa5.28□□□□□ -1.56
RPF1YHR088W YGL140CP53120 1219 aa5.28□□□□□ -1.56
RPF1YHR088W YPL109CQ02981 657 aa5.28□□□□□ -1.56
RPF1YHR088W SEC23P15303 768 aaKnown RBP5.27□□□□□ -1.57
RPF1YHR088W GIP4P39732 760 aa5.27□□□□□ -1.57
RPF1YHR088W YJL045WP47052 634 aa5.27□□□□□ -1.57
RPF1YHR088W HDA2Q06629 674 aa5.27□□□□□ -1.57
RPF1YHR088W YDL177CQ12257 170 aa5.27□□□□□ -1.57
RPF1YHR088W COQ4O13525 335 aa5.26□□□□□ -1.57
RPF1YHR088W YSC84P32793 468 aa5.26□□□□□ -1.57
RPF1YHR088W AIM3P38266 947 aaKnown RBP5.26□□□□□ -1.57
RPF1YHR088W RSC58Q07979 502 aa5.26□□□□□ -1.57
RPF1YHR088W UGA4P32837 571 aa5.25□□□□□ -1.57
RPF1YHR088W FLR1P38124 548 aa5.25□□□□□ -1.57
RPF1YHR088W CCZ1P38273 704 aa5.25□□□□□ -1.57
RPF1YHR088W ETP1P38748 585 aaKnown RBP5.25□□□□□ -1.57
RPF1YHR088W ENT3P47160 408 aa5.25□□□□□ -1.57
RPF1YHR088W HNT2P49775 206 aa5.25□□□□□ -1.57
RPF1YHR088W YNR063WP53749 607 aa5.25□□□□□ -1.57
RPF1YHR088W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
RPF1YHR088W EST2Q06163 884 aa5.25□□□□□ -1.57
RPF1YHR088W SPS1P08458 490 aa5.24□□□□□ -1.57
RPF1YHR088W AIM26P32858 118 aa5.24□□□□□ -1.57
RPF1YHR088W HXK1P04806 485 aaKnown RBP5.23□□□□□ -1.57
RPF1YHR088W BAP2P38084 609 aa5.23□□□□□ -1.57
RPF1YHR088W RPN3P40016 523 aaKnown RBP5.23□□□□□ -1.57
RPF1YHR088W TAF1P46677 1066 aa5.23□□□□□ -1.57
RPF1YHR088W YOR352WQ08816 343 aa5.23□□□□□ -1.57
RPF1YHR088W YPL260WQ08977 551 aa5.23□□□□□ -1.57
RPF1YHR088W MCD1Q12158 566 aa5.23□□□□□ -1.57
RPF1YHR088W RPS13P05756 151 aaKnown RBP5.22□□□□□ -1.57
RPF1YHR088W NMD3P38861 518 aaKnown RBP5.22□□□□□ -1.57
RPF1YHR088W TNA1P53322 534 aa5.22□□□□□ -1.57
RPF1YHR088W HOS3Q02959 697 aaKnown RBP5.22□□□□□ -1.57
RPF1YHR088W GSF2Q04697 403 aaKnown RBP5.22□□□□□ -1.57
RPF1YHR088W YPL277CQ08989 487 aa5.22□□□□□ -1.57
RPF1YHR088W YLR358CO13565 187 aa5.21□□□□□ -1.58
RPF1YHR088W KIP1P28742 1111 aa5.21□□□□□ -1.58
RPF1YHR088W SLD2P34252 453 aa5.21□□□□□ -1.58
RPF1YHR088W PIK1P39104 1066 aa5.21□□□□□ -1.58
RPF1YHR088W THI12P42883 340 aa5.21□□□□□ -1.58
RPF1YHR088W THI5P43534 340 aa5.21□□□□□ -1.58
RPF1YHR088W THI11P47183 340 aa5.21□□□□□ -1.58
RPF1YHR088W THI13Q07748 340 aa5.21□□□□□ -1.58
RPF1YHR088W WHI5Q12416 295 aa5.21□□□□□ -1.58
RPF1YHR088W PTC5Q12511 572 aa5.21□□□□□ -1.58
RPF1YHR088W HEM13P11353 328 aaKnown RBP5.2□□□□□ -1.58
RPF1YHR088W RPT1P33299 467 aaKnown RBP5.2□□□□□ -1.58
RPF1YHR088W TOD6P34219 525 aa5.2□□□□□ -1.58
RPF1YHR088W SEC26P41810 973 aaKnown RBP5.2□□□□□ -1.58
RPF1YHR088W MRPS18P42847 217 aa5.2□□□□□ -1.58
RPF1YHR088W YGR122WP53272 402 aa5.2□□□□□ -1.58
RPF1YHR088W PUF4P25339 888 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
RPF1YHR088W AFG2P32794 780 aa5.19□□□□□ -1.58
RPF1YHR088W FAA3P39002 694 aa5.19□□□□□ -1.58
RPF1YHR088W SGD1Q06132 899 aa5.19□□□□□ -1.58
RPF1YHR088W RSB1Q08417 382 aa5.19□□□□□ -1.58
RPF1YHR088W PRE10P21242 288 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
RPF1YHR088W PIC2P40035 300 aa5.18□□□□□ -1.58
RPF1YHR088W TOS4Q06266 489 aa5.18□□□□□ -1.58
RPF1YHR088W PRE9P23638 258 aaKnown RBP5.17□□□□□ -1.58
RPF1YHR088W ALG3P38179 458 aa5.17□□□□□ -1.58
RPF1YHR088W SIW14P53965 281 aa5.17□□□□□ -1.58
RPF1YHR088W CLU1Q03690 1277 aaKnown RBP5.17□□□□□ -1.58
RPF1YHR088W YDR132CQ03900 495 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms