RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YKR018CP36114 725 aa4.57□□□□□ -1.68
TRS85YDR108W IES2P40154 320 aa4.57□□□□□ -1.68
TRS85YDR108W RPT2P40327 437 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W YJR008WP47085 338 aa4.57□□□□□ -1.68
TRS85YDR108W BRE1Q07457 700 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W DRS2P39524 1355 aa4.57□□□□□ -1.68
TRS85YDR108W DNF2Q12675 1612 aa4.57□□□□□ -1.68
TRS85YDR108W TUP1P16649 713 aa4.57□□□□□ -1.68
TRS85YDR108W PRE10P21242 288 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
TRS85YDR108W PDB1P32473 366 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W RPN2P32565 945 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W GGA2P38817 585 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W SPC72P39723 622 aa4.57□□□□□ -1.68
TRS85YDR108W OSW7P43611 510 aa4.57□□□□□ -1.68
TRS85YDR108W SAP155P43612 1002 aa4.57□□□□□ -1.68
TRS85YDR108W VPS53P47061 822 aa4.57□□□□□ -1.68
TRS85YDR108W MSN5P52918 1224 aa4.57□□□□□ -1.68
TRS85YDR108W ESF2P53743 316 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W BNI5P53890 448 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W YNL115CP53925 644 aa4.57□□□□□ -1.68
TRS85YDR108W MFM1Q02783 413 aa4.57□□□□□ -1.68
TRS85YDR108W SPN1Q06505 410 aaPredicted RBP4.57□□□□□ -1.68
TRS85YDR108W TSR2Q06672 205 aaKnown RBP4.57□□□□□ -1.68
TRS85YDR108W YPR097WQ06839 1073 aa4.57□□□□□ -1.68
TRS85YDR108W PSK2Q08217 1101 aa4.57□□□□□ -1.68
TRS85YDR108W DNL4Q08387 944 aaPredicted RBP4.57□□□□□ -1.68
TRS85YDR108W TY3B-GQ99315 1547 aa4.56□□□□□ -1.68
TRS85YDR108W NAT1P12945 854 aaKnown RBP4.56□□□□□ -1.68
TRS85YDR108W ATE1P16639 503 aa4.56□□□□□ -1.68
TRS85YDR108W GAL11P19659 1081 aa4.56□□□□□ -1.68
TRS85YDR108W RRN6P32786 894 aa4.56□□□□□ -1.68
TRS85YDR108W SYG1P40528 902 aa4.56□□□□□ -1.68
TRS85YDR108W LSG1P53145 640 aaKnown RBP4.56□□□□□ -1.68
TRS85YDR108W SDA1P53313 767 aaKnown RBP4.56□□□□□ -1.68
TRS85YDR108W SFB2P53953 876 aa4.56□□□□□ -1.68
TRS85YDR108W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68 RIP-Chip
TRS85YDR108W SFH1Q06168 426 aa4.56□□□□□ -1.68
TRS85YDR108W VAM6Q07468 1049 aa4.56□□□□□ -1.68
TRS85YDR108W RKR1Q04781 1562 aa4.56□□□□□ -1.68
TRS85YDR108W TRL1P09880 827 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W DAL7P21826 554 aa4.55□□□□□ -1.68
TRS85YDR108W SEC15P22224 910 aa4.55□□□□□ -1.68
TRS85YDR108W STE11P23561 717 aa4.55□□□□□ -1.68
TRS85YDR108W RPC19P28000 142 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W SMY2P32909 740 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W MUD2P36084 527 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W TBS1P38114 1094 aa4.55□□□□□ -1.68
TRS85YDR108W MET18P40469 1032 aa4.55□□□□□ -1.68
TRS85YDR108W GCN20P43535 752 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W NUP42P49686 430 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W NIS1P53939 407 aa4.55□□□□□ -1.68
TRS85YDR108W RSM28Q03430 361 aa4.55□□□□□ -1.68
TRS85YDR108W YML108WQ03759 105 aa4.55□□□□□ -1.68
TRS85YDR108W ITT1Q04638 464 aa4.55□□□□□ -1.68
TRS85YDR108W FUS2Q05670 677 aa4.55□□□□□ -1.68
TRS85YDR108W STE23Q06010 1027 aa4.55□□□□□ -1.68
TRS85YDR108W RSC2Q06488 889 aa4.55□□□□□ -1.68
TRS85YDR108W BUD7Q08754 746 aa4.55□□□□□ -1.68
TRS85YDR108W CTI6Q08923 506 aa4.55□□□□□ -1.68
TRS85YDR108W YOR223WQ12015 292 aa4.55□□□□□ -1.68
TRS85YDR108W AIM7Q12156 149 aa4.55□□□□□ -1.68
TRS85YDR108W TRS33Q99394 268 aa4.55□□□□□ -1.68
TRS85YDR108W RAV1P47104 1357 aa4.55□□□□□ -1.68
TRS85YDR108W CDC31P06704 161 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W ECM32P32644 1121 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W COY1P34237 679 aa4.55□□□□□ -1.68
TRS85YDR108W NUP120P35729 1037 aa4.55□□□□□ -1.68
TRS85YDR108W YSW1P38280 609 aa4.55□□□□□ -1.68
TRS85YDR108W HSM3P38348 480 aa4.55□□□□□ -1.68
TRS85YDR108W PIH1P38768 344 aa4.55□□□□□ -1.68
TRS85YDR108W CCT5P40413 562 aaKnown RBP4.55□□□□□ -1.68
TRS85YDR108W SHE10P53075 577 aa4.55□□□□□ -1.68
TRS85YDR108W MEH1Q02205 184 aa4.55□□□□□ -1.68
TRS85YDR108W MGR3Q04472 501 aa4.55□□□□□ -1.68
TRS85YDR108W SWI1P09547 1314 aa4.55□□□□□ -1.68
TRS85YDR108W HAP1P0CE41 1502 aa4.54□□□□□ -1.68
TRS85YDR108W PET494P07390 489 aaPredicted RBP4.54□□□□□ -1.68
TRS85YDR108W RNR2P09938 399 aaKnown RBP4.54□□□□□ -1.68
TRS85YDR108W ADH4P10127 382 aa4.54□□□□□ -1.68
TRS85YDR108W HMG1P12683 1054 aa4.54□□□□□ -1.68
TRS85YDR108W TYR1P20049 452 aa4.54□□□□□ -1.68
TRS85YDR108W ARG1P22768 420 aa4.54□□□□□ -1.68
TRS85YDR108W UGA3P26370 528 aa4.54□□□□□ -1.68
TRS85YDR108W NPL6P32832 435 aa4.54□□□□□ -1.68
TRS85YDR108W RIB7P33312 244 aa4.54□□□□□ -1.68
TRS85YDR108W SEG2P34250 1132 aa4.54□□□□□ -1.68
TRS85YDR108W REI1P38344 393 aaPredicted RBP4.54□□□□□ -1.68
TRS85YDR108W ETP1P38748 585 aaKnown RBP4.54□□□□□ -1.68
TRS85YDR108W CIC1P38779 376 aaKnown RBP4.54□□□□□ -1.68
TRS85YDR108W LIN1P38852 340 aaPredicted RBP4.54□□□□□ -1.68
TRS85YDR108W CCT4P39078 528 aaKnown RBP4.54□□□□□ -1.68
TRS85YDR108W SDS3P40505 327 aa4.54□□□□□ -1.68
TRS85YDR108W YIL001WP40560 513 aa4.54□□□□□ -1.68
TRS85YDR108W REX2P54964 269 aaKnown RBP4.54□□□□□ -1.68
TRS85YDR108W SSQ1Q05931 657 aaPredicted RBP4.54□□□□□ -1.68
TRS85YDR108W SGD1Q06132 899 aa4.54□□□□□ -1.68
TRS85YDR108W YIG1Q08956 461 aa4.54□□□□□ -1.68
TRS85YDR108W LYS2P07702 1392 aa4.54□□□□□ -1.68
TRS85YDR108W JIP3O13555 125 aa4.53□□□□□ -1.68
TRS85YDR108W PET122P10355 254 aa4.53□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 104.4 ms