RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	UBP7	P40453	1071 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	YFH7	P43591	353 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	IOC4	Q04213	475 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	SEC23	P15303	768 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	LRE1	P25579	583 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	MSH1	P25846	959 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	JHD1	P40034	492 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	SLD5	Q03406	294 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	YCS4	Q06156	1176 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	MSD1	P15179	658 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	BRE2	P43132	505 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	JJJ3	P47138	172 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	KRE33	P53914	1056 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	VPS72	Q03388	795 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	LCD1	Q04377	747 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	AHC1	Q12433	566 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	SNQ2	P32568	1501 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	PDC1	P06169	563 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	SEC14	P24280	304 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	MET1	P36150	593 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	SRP68	P38687	599 aa	Known RBP	4.16	□□□□□ -1.74
RPO21	YDL140C	SHE10	P53075	577 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	YDR338C	Q05497	695 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	GPI13	Q07830	1017 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	STB3	Q12427	513 aa		4.16	□□□□□ -1.74
RPO21	YDL140C	PRT1	P06103	763 aa	Known RBP	4.15	□□□□□ -1.74
RPO21	YDL140C	PYC1	P11154	1178 aa	Known RBP	4.15	□□□□□ -1.74
RPO21	YDL140C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
RPO21	YDL140C	HEM3	P28789	327 aa		4.15	□□□□□ -1.74
RPO21	YDL140C	BUD16	P39988	312 aa		4.15	□□□□□ -1.74
RPO21	YDL140C	YJL007C	P47080	104 aa		4.15	□□□□□ -1.74
RPO21	YDL140C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
RPO21	YDL140C	YAP5	P40574	245 aa		4.15	□□□□□ -1.74
RPO21	YDL140C	YJL049W	P47048	450 aa		4.15	□□□□□ -1.74
RPO21	YDL140C	YML020W	Q03722	664 aa		4.15	□□□□□ -1.74
RPO21	YDL140C	PSK2	Q08217	1101 aa		4.15	□□□□□ -1.74
RPO21	YDL140C	PRP4	P20053	465 aa	Known RBP	4.15	□□□□□ -1.75
RPO21	YDL140C	EUG1	P32474	517 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	BRL1	P38770	471 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	GIC1	P38785	314 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	YJR061W	P40355	935 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	EAF6	P47128	113 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	ATG2	P53855	1592 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	PEX29	Q03370	554 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	RSF1	Q05043	376 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	NDI1	P32340	513 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	TFG2	P41896	400 aa	Predicted RBP	4.15	□□□□□ -1.75
RPO21	YDL140C	PEX15	Q08215	383 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	LAP2	Q10740	671 aa		4.15	□□□□□ -1.75
RPO21	YDL140C	RNR2	P09938	399 aa	Known RBP	4.14	□□□□□ -1.75
RPO21	YDL140C	MAL31	P38156	614 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	OPY1	P38271	328 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	IFA38	P38286	347 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	SMF1	P38925	575 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	PSY2	P40164	858 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	YFL034W	P43564	1073 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	TAF1	P46677	1066 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	DPL1	Q05567	589 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	VPS25	P47142	202 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	HXT15	P54854	567 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	MTD1	Q02046	320 aa	Known RBP	4.14	□□□□□ -1.75
RPO21	YDL140C	AUS1	Q08409	1394 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	ILS1	P09436	1072 aa	Known RBP	4.14	□□□□□ -1.75
RPO21	YDL140C	HCA4	P20448	770 aa	Known RBP	4.14	□□□□□ -1.75
RPO21	YDL140C	VPH1	P32563	840 aa	Known RBP	4.14	□□□□□ -1.75
RPO21	YDL140C	MFT1	P33441	392 aa	Known RBP	4.14	□□□□□ -1.75
RPO21	YDL140C	EAF5	P39995	279 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	PIB2	P53191	635 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	UFD2	P54860	961 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	GNT1	Q12096	491 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	HES1	P35843	434 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	PET10	P36139	283 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
RPO21	YDL140C	MCD1	Q12158	566 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	SPO21	Q12411	609 aa		4.14	□□□□□ -1.75
RPO21	YDL140C	PDE1	P22434	369 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	UBC6	P33296	250 aa	Predicted RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	MNN11	P46985	422 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	RPT4	P53549	437 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	TOF2	Q02208	771 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	HRQ1	Q05549	1077 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	CMR1	Q12510	522 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	SMC6	Q12749	1114 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	SRO9	P25567	434 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	TRM2	P33753	639 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	MRPL40	P36534	297 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	SPT8	P38915	602 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	VAC8	P39968	578 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	CIK1	Q01649	594 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	TRS130	Q03660	1102 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	CMS1	Q07897	291 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	DIS3	Q08162	1001 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	YOL098C	Q12496	1037 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	SGE1	P33335	543 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	ADD66	P36040	267 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	MIC60	P36112	540 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	CAJ1	P39101	391 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	KAP123	P40069	1113 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	RPB2	P08518	1224 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	WHI2	P12611	486 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms