RNA–Protein interactions for RNA: YBR115C

LYS2, Transcript of Alpha aminoadipate reductase, yeast

Gene LYS2, Length 4,179 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS2	YBR115C	YEL1	P34225	687 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	SWH1	P35845	1188 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	NMD3	P38861	518 aa	Known RBP	4.99	□□□□□ -1.61
LYS2	YBR115C	YML037C	Q03703	340 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	GPN2	Q08726	347 aa	Predicted RBP	4.99	□□□□□ -1.61
LYS2	YBR115C	TIF1	P10081	395 aa	Known RBP	4.99	□□□□□ -1.61
LYS2	YBR115C	BRE5	P53741	515 aa	Known RBP	4.99	□□□□□ -1.61
LYS2	YBR115C	THI22	Q06490	572 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	TY1B-A	O13527	1196 aa	Known RBP	4.99	□□□□□ -1.61
LYS2	YBR115C	SWI6	P09959	803 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	FUB1	P25659	250 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
LYS2	YBR115C	BUD2	P33314	1104 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	RGA1	P39083	1007 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	SPO74	P45819	413 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	BFA1	P47113	574 aa		4.99	□□□□□ -1.61
LYS2	YBR115C	POX1	P13711	748 aa		4.98	□□□□□ -1.61
LYS2	YBR115C	DBP1	P24784	617 aa	Known RBP	4.98	□□□□□ -1.61
LYS2	YBR115C	SEC20	P28791	383 aa		4.98	□□□□□ -1.61
LYS2	YBR115C	PTK1	P36002	662 aa	Predicted RBP	4.98	□□□□□ -1.61
LYS2	YBR115C	SEC27	P41811	889 aa	Known RBP	4.98	□□□□□ -1.61
LYS2	YBR115C	IOC3	P43596	787 aa		4.98	□□□□□ -1.61
LYS2	YBR115C	RPP0	P05317	312 aa	Known RBP	4.98	□□□□□ -1.61
LYS2	YBR115C	BOI1	P38041	980 aa	Known RBP	4.98	□□□□□ -1.61
LYS2	YBR115C	PRE8	P23639	250 aa		4.97	□□□□□ -1.61
LYS2	YBR115C	MCM4	P30665	933 aa	Known RBP	4.97	□□□□□ -1.61
LYS2	YBR115C	DAK1	P54838	584 aa	Known RBP	4.97	□□□□□ -1.61
LYS2	YBR115C	RRP9	Q06506	573 aa	Known RBP	4.97	□□□□□ -1.61
LYS2	YBR115C	YDL124W	Q07551	312 aa	Known RBP	4.97	□□□□□ -1.61
LYS2	YBR115C	RME1	P32338	300 aa	Known RBP	4.97	□□□□□ -1.61
LYS2	YBR115C	PPX1	P38698	397 aa		4.97	□□□□□ -1.61
LYS2	YBR115C	MIP1	P15801	1254 aa		4.97	□□□□□ -1.61
LYS2	YBR115C	SKP2	P42843	763 aa		4.97	□□□□□ -1.61
LYS2	YBR115C	MET13	P53128	600 aa		4.97	□□□□□ -1.61
LYS2	YBR115C	ISW2	Q08773	1120 aa		4.97	□□□□□ -1.61
LYS2	YBR115C	UTP9	P38882	575 aa	Known RBP	4.97	□□□□□ -1.61
LYS2	YBR115C	STM1	P39015	273 aa	Known RBP	4.97	□□□□□ -1.61
LYS2	YBR115C	YOL098C	Q12496	1037 aa		4.97	□□□□□ -1.61
LYS2	YBR115C	PDC1	P06169	563 aa	Known RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	RPS19A	P07280	144 aa	Known RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	RPS19B	P07281	144 aa	Predicted RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	SRM1	P21827	482 aa		4.96	□□□□□ -1.62
LYS2	YBR115C	CCL1	P37366	393 aa		4.96	□□□□□ -1.62
LYS2	YBR115C	NOP4	P37838	685 aa	Known RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	SPT8	P38915	602 aa		4.96	□□□□□ -1.62
LYS2	YBR115C	UTP13	Q05946	817 aa	Known RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	CLF1	Q12309	687 aa	Predicted RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	MEF1	P25039	761 aa		4.96	□□□□□ -1.62
LYS2	YBR115C	TGL1	P34163	548 aa		4.96	□□□□□ -1.62
LYS2	YBR115C	SDA1	P53313	767 aa	Known RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	YDR344C	Q05510	147 aa		4.96	□□□□□ -1.62
LYS2	YBR115C	RRP15	Q06511	250 aa	Predicted RBP	4.96	□□□□□ -1.62
LYS2	YBR115C	PSR2	Q07949	397 aa		4.96	□□□□□ -1.62
LYS2	YBR115C	MMF1	P40185	145 aa	Known RBP	4.95	□□□□□ -1.62
LYS2	YBR115C	HEH2	Q03281	663 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	TFC4	P33339	1025 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	VID30	P53076	958 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	BTN2	P53286	410 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	DUS4	Q06063	367 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	SPH1	Q06160	661 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	RTT109	Q07794	436 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	YLR422W	Q06409	1932 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	PTC4	P38089	393 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	SSO2	P39926	295 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	TRM11	Q12463	433 aa		4.95	□□□□□ -1.62
LYS2	YBR115C	RDH54	P38086	958 aa		4.94	□□□□□ -1.62
LYS2	YBR115C	TMA64	Q04600	565 aa	Known RBP	4.94	□□□□□ -1.62
LYS2	YBR115C	TFB3	Q03290	321 aa		4.94	□□□□□ -1.62
LYS2	YBR115C	TSR1	Q07381	788 aa	Known RBP	4.94	□□□□□ -1.62
LYS2	YBR115C	CUS1	Q02554	436 aa	Predicted RBP	4.94	□□□□□ -1.62
LYS2	YBR115C	OPY2	Q06810	360 aa		4.94	□□□□□ -1.62
LYS2	YBR115C	DUR3	P33413	735 aa		4.94	□□□□□ -1.62
LYS2	YBR115C	MNR2	P35724	969 aa		4.94	□□□□□ -1.62
LYS2	YBR115C	LSG1	P53145	640 aa	Known RBP	4.94	□□□□□ -1.62
LYS2	YBR115C	PRP3	Q03338	469 aa	Predicted RBP	4.94	□□□□□ -1.62
LYS2	YBR115C	BRE1	Q07457	700 aa	Known RBP	4.94	□□□□□ -1.62
LYS2	YBR115C	MSD1	P15179	658 aa	Known RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	KAR3	P17119	729 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	VPS27	P40343	622 aa	Known RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	RPL40A	P0CH08	128 aa	Known RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	RPL40B	P0CH09	128 aa	Known RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	SEC18	P18759	758 aa	Known RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	DAL1	P32375	460 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	BIO2	P32451	375 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	VPS24	P36095	224 aa	Known RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	DMA1	P38823	416 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	SSP1	P38871	571 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	CIT3	P43635	486 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	SCM3	Q12334	223 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	CUP1-1	P0CX80	61 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	CUP1-2	P0CX81	61 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	KRR1	P25586	316 aa	Predicted RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	GCD7	P32502	381 aa	Predicted RBP	4.93	□□□□□ -1.62
LYS2	YBR115C	MDL2	P33311	773 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	SLD2	P34252	453 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	BUD16	P39988	312 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	INM2	Q05533	292 aa		4.93	□□□□□ -1.62
LYS2	YBR115C	UTR4	P32626	227 aa		4.92	□□□□□ -1.62
LYS2	YBR115C	OSH3	P38713	996 aa	Known RBP	4.92	□□□□□ -1.62
LYS2	YBR115C	SMC2	P38989	1170 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms