RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Fam13aQ8BGI4 693 aa17.29■□□□□ 0.36
Lime1-201ENSMUST00000048077 Nek4Q9Z1J2 792 aa17.29■□□□□ 0.36
Lime1-201ENSMUST00000048077 1700010I14RikQ7TPG0 532 aa17.29■□□□□ 0.36
Lime1-201ENSMUST00000048077 PtprvP70289 1705 aa17.29■□□□□ 0.36
Lime1-201ENSMUST00000048077 ScaperF8VQ70 1398 aaKnown RBP17.28■□□□□ 0.36
Lime1-201ENSMUST00000048077 Aplp1Q03157 653 aa17.28■□□□□ 0.36
Lime1-201ENSMUST00000048077 Rtf1A2AQ19 715 aaKnown RBP17.28■□□□□ 0.36
Lime1-201ENSMUST00000048077 Ecm2Q5FW85 670 aa17.28■□□□□ 0.36
Lime1-201ENSMUST00000048077 Dennd6aQ8BH65 605 aa17.27■□□□□ 0.36
Lime1-201ENSMUST00000048077 Plin1Q8CGN5 517 aa17.27■□□□□ 0.36
Lime1-201ENSMUST00000048077 Triml2E9PW10 424 aa17.26■□□□□ 0.35
Lime1-201ENSMUST00000048077 Hoxa7P02830 229 aa17.26■□□□□ 0.35
Lime1-201ENSMUST00000048077 FancaQ9JL70 1439 aa17.26■□□□□ 0.35
Lime1-201ENSMUST00000048077 Nlgn1Q99K10 843 aa17.26■□□□□ 0.35
Lime1-201ENSMUST00000048077 Msh6P54276 1358 aaKnown RBP17.25■□□□□ 0.35
Lime1-201ENSMUST00000048077 Prkar2bP31324 416 aa17.25■□□□□ 0.35
Lime1-201ENSMUST00000048077 Aifm3Q3TY86 605 aa17.25■□□□□ 0.35
Lime1-201ENSMUST00000048077 Safb2Q80YR5 991 aaKnown RBP17.25■□□□□ 0.35
Lime1-201ENSMUST00000048077 FanclQ9CR14 375 aa17.25■□□□□ 0.35
Lime1-201ENSMUST00000048077 Mcm4P49717 862 aa17.24■□□□□ 0.35
Lime1-201ENSMUST00000048077 Fgd1P52734 960 aa17.24■□□□□ 0.35
Lime1-201ENSMUST00000048077 PrkcshO08795 521 aa17.24■□□□□ 0.35
Lime1-201ENSMUST00000048077 Isy1Q69ZQ2 285 aaKnown RBP17.24■□□□□ 0.35
Lime1-201ENSMUST00000048077 Ssh1Q76I79 1042 aa17.24■□□□□ 0.35
Lime1-201ENSMUST00000048077 Senp3Q9EP97 568 aaKnown RBP17.24■□□□□ 0.35
Lime1-201ENSMUST00000048077 Tfip11Q9ERA6 838 aaKnown RBP17.24■□□□□ 0.35
Lime1-201ENSMUST00000048077 Ccdc146E9Q9F7 977 aa17.23■□□□□ 0.35
Lime1-201ENSMUST00000048077 Idi1P58044 227 aa17.23■□□□□ 0.35
Lime1-201ENSMUST00000048077 Eya1P97767 591 aa17.23■□□□□ 0.35
Lime1-201ENSMUST00000048077 Sv2bQ8BG39 683 aa17.23■□□□□ 0.35
Lime1-201ENSMUST00000048077 Bcl9Q9D219 1425 aa17.23■□□□□ 0.35
Lime1-201ENSMUST00000048077 Elp1Q7TT37 1333 aaKnown RBP17.23■□□□□ 0.35
Lime1-201ENSMUST00000048077 Nucb1Q02819 459 aaKnown RBP17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Ano8Q6PB70 1060 aa17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Ppp6r3Q922D4 844 aa17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Foxp4Q9DBY0 795 aaKnown RBP17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Rnf123Q5XPI3 1314 aa17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Myo5bP21271 1818 aa17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Arfgef2A2A5R2 1792 aa17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Ggnbp2Q5SV77 696 aa17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Ppip5k2Q6ZQB6 1129 aa17.22■□□□□ 0.35
Lime1-201ENSMUST00000048077 Dnajc5gQ8C632 165 aa17.21■□□□□ 0.35
Lime1-201ENSMUST00000048077 Ap3b2Q9JME5 1082 aa17.21■□□□□ 0.35
Lime1-201ENSMUST00000048077 1700019A02RikA0A087WPV9 146 aa17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 Ddit3P35639 168 aa17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 EngaseQ8BX80 734 aa17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 NgefQ8CHT1 710 aa17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 Cabp4Q8VHC5 271 aa17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 Nsfl1cQ9CZ44 370 aaKnown RBP17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 Pdia3P27773 505 aaKnown RBP17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 HypkQ9CR41 129 aa17.2■□□□□ 0.34
Lime1-201ENSMUST00000048077 Prim1P20664 417 aa17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 Rfx1P48377 963 aa17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 GorabQ8BRM2 368 aa17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 Ahnak2E9PYB0 1738 aaKnown RBP17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 Atg4a-psA0A0G2JFS9 396 aa17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 Gm21190A0A0G2JGJ6 266 aa17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 Atg4aQ8C9S8 396 aa17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 Cyp46a1Q9WVK8 500 aa17.19■□□□□ 0.34
Lime1-201ENSMUST00000048077 Gm10563F6WIE4 79 aa17.18■□□□□ 0.34
Lime1-201ENSMUST00000048077 Atf5O70191 283 aa17.17■□□□□ 0.34
Lime1-201ENSMUST00000048077 Gnai2P08752 355 aaKnown RBP17.17■□□□□ 0.34
Lime1-201ENSMUST00000048077 Hoxc9P09633 260 aa17.17■□□□□ 0.34
Lime1-201ENSMUST00000048077 Stk36Q69ZM6 1316 aa17.17■□□□□ 0.34
Lime1-201ENSMUST00000048077 Casq1O09165 405 aa17.17■□□□□ 0.34
Lime1-201ENSMUST00000048077 Gsdma3Q5Y4Y6 464 aa17.16■□□□□ 0.34
Lime1-201ENSMUST00000048077 Phf14Q9D4H9 881 aa17.15■□□□□ 0.34
Lime1-201ENSMUST00000048077 Pibf1E9Q6K3 756 aa17.15■□□□□ 0.34
Lime1-201ENSMUST00000048077 Ccne1Q61457 408 aa17.15■□□□□ 0.34
Lime1-201ENSMUST00000048077 Alpk3Q924C5 1678 aa17.15■□□□□ 0.34
Lime1-201ENSMUST00000048077 Robo1O89026 1612 aa17.14■□□□□ 0.33
Lime1-201ENSMUST00000048077 Rimbp3Q3V0F0 1606 aa17.14■□□□□ 0.33
Lime1-201ENSMUST00000048077 Plcb2A3KGF7 1181 aa17.14■□□□□ 0.33
Lime1-201ENSMUST00000048077 Kif20aP97329 887 aa17.14■□□□□ 0.33
Lime1-201ENSMUST00000048077 Sox12Q04890 314 aa17.14■□□□□ 0.33
Lime1-201ENSMUST00000048077 Q3TQI7 289 aaKnown RBP17.14■□□□□ 0.33
Lime1-201ENSMUST00000048077 Zkscan2G3X952 960 aa17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 Mrps27Q8BK72 415 aaKnown RBP17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 Smarca5Q91ZW3 1051 aaKnown RBP17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 Nphp1Q9QY53 687 aa17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 Nckap5lQ6GQX2 1323 aa17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 Erc2Q6PH08 957 aa17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 GphnQ8BUV3 769 aaKnown RBP17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 Pnpla7A2AJ88 1352 aa17.13■□□□□ 0.33
Lime1-201ENSMUST00000048077 PtmsQ9D0J8 101 aaKnown RBP17.12■□□□□ 0.33
Lime1-201ENSMUST00000048077 C3P01027 1663 aa17.12■□□□□ 0.33
Lime1-201ENSMUST00000048077 Nup153E9Q3G8 1462 aaKnown RBP17.11■□□□□ 0.33
Lime1-201ENSMUST00000048077 Kdm6aO70546 1401 aa17.11■□□□□ 0.33
Lime1-201ENSMUST00000048077 Atp8b2P98199 1209 aa17.11■□□□□ 0.33
Lime1-201ENSMUST00000048077 Fam83gQ5SWY7 812 aa17.11■□□□□ 0.33
Lime1-201ENSMUST00000048077 Noc3lQ8VI84 807 aaKnown RBP17.11■□□□□ 0.33
Lime1-201ENSMUST00000048077 Snap23O09044 210 aa17.11■□□□□ 0.33
Lime1-201ENSMUST00000048077 Mmp8O70138 465 aa17.11■□□□□ 0.33
Lime1-201ENSMUST00000048077 Ncoa4Q5U4H9 625 aa17.1■□□□□ 0.33
Lime1-201ENSMUST00000048077 Zkscan1Q8BGS3 561 aaKnown RBP17.1■□□□□ 0.33
Lime1-201ENSMUST00000048077 Dnttip2Q8R2M2 758 aaKnown RBP17.1■□□□□ 0.33
Lime1-201ENSMUST00000048077 Amotl1Q9D4H4 968 aa17.1■□□□□ 0.33
Lime1-201ENSMUST00000048077 Dlg5E9Q9R9 1921 aa17.1■□□□□ 0.33
Lime1-201ENSMUST00000048077 Abcc12Q80WJ6 1366 aa17.1■□□□□ 0.33
Lime1-201ENSMUST00000048077 Disp3A3KFU9 1347 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms