RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 NischQ80TM9 1593 aa27.11■■□□□ 1.93
Lime1-201ENSMUST00000048077 Gm35339A0A140LHH9 1649 aa26.83■■□□□ 1.89
Lime1-201ENSMUST00000048077 Abcc9P70170 1546 aa26.4■■□□□ 1.82
Lime1-201ENSMUST00000048077 Abcc8B2RUS7 1588 aa25.77■■□□□ 1.72
Lime1-201ENSMUST00000048077 Rtl1Q7M732 1744 aa25.07■■□□□ 1.6
Lime1-201ENSMUST00000048077 Rhox8Q6VSS7 320 aa24.86■■□□□ 1.57
Lime1-201ENSMUST00000048077 Ccdc180J3QNE4 1664 aa24.51■■□□□ 1.51
Lime1-201ENSMUST00000048077 Dcaf1Q80TR8 1506 aa24.23■■□□□ 1.47
Lime1-201ENSMUST00000048077 Zcchc6Q5BLK4 1491 aaKnown RBP23.97■■□□□ 1.43
Lime1-201ENSMUST00000048077 ScribQ80U72 1612 aa23.96■■□□□ 1.43
Lime1-201ENSMUST00000048077 Rb1cc1Q9ESK9 1588 aa23.76■■□□□ 1.39
Lime1-201ENSMUST00000048077 Baz1aO88379 1555 aa23.54■■□□□ 1.36
Lime1-201ENSMUST00000048077 Kdm5dQ62240 1548 aa23.52■■□□□ 1.36
Lime1-201ENSMUST00000048077 NacadQ5SWP3 1504 aa23.4■■□□□ 1.34
Lime1-201ENSMUST00000048077 HrcG5E8J6 738 aa23.28■■□□□ 1.32
Lime1-201ENSMUST00000048077 Crybg2B7ZCC2 1516 aa23.24■■□□□ 1.31
Lime1-201ENSMUST00000048077 Rpgrip1Q9EPQ2 1331 aa23.16■■□□□ 1.3
Lime1-201ENSMUST00000048077 Smarca2Q6DIC0 1577 aa23.03■■□□□ 1.28
Lime1-201ENSMUST00000048077 Ccdc136Q3TVA9 1136 aa23.01■■□□□ 1.27
Lime1-201ENSMUST00000048077 Sycp2Q9CUU3 1500 aa22.87■■□□□ 1.25
Lime1-201ENSMUST00000048077 Trim41Q5NCC3 630 aa22.78■■□□□ 1.24
Lime1-201ENSMUST00000048077 Acin1Q9JIX8 1338 aaKnown RBP22.67■■□□□ 1.22
Lime1-201ENSMUST00000048077 Cep164Q5DU05 1446 aa22.57■■□□□ 1.2
Lime1-201ENSMUST00000048077 Brd4Q9ESU6 1400 aaKnown RBP22.45■■□□□ 1.18
Lime1-201ENSMUST00000048077 BicraF8VPZ9 1578 aa22.3■■□□□ 1.16
Lime1-201ENSMUST00000048077 Cecr2E9Q2Z1 1453 aa22.28■■□□□ 1.16
Lime1-201ENSMUST00000048077 Golga3P55937 1487 aa22.2■■□□□ 1.15
Lime1-201ENSMUST00000048077 Ehmt2Q9Z148 1263 aaKnown RBP22.19■■□□□ 1.14
Lime1-201ENSMUST00000048077 Synj1Q8CHC4 1574 aa22.18■■□□□ 1.14
Lime1-201ENSMUST00000048077 Rsf1E9PWW9 1441 aaKnown RBP22.16■■□□□ 1.14
Lime1-201ENSMUST00000048077 CftrP26361 1476 aa22.08■■□□□ 1.12
Lime1-201ENSMUST00000048077 Cngb1E1AZ71 1325 aa22.04■■□□□ 1.12
Lime1-201ENSMUST00000048077 Cttnbp2B9EJA2 1648 aa22.03■■□□□ 1.12
Lime1-201ENSMUST00000048077 Top2bQ64511 1612 aa22.01■■□□□ 1.11
Lime1-201ENSMUST00000048077 Chic1Q8CBW7 227 aa22■■□□□ 1.11
Lime1-201ENSMUST00000048077 Ccdc88bQ4QRL3 1481 aa21.99■■□□□ 1.11
Lime1-201ENSMUST00000048077 Smarca4Q3TKT4 1613 aaKnown RBP21.9■■□□□ 1.1
Lime1-201ENSMUST00000048077 Esf1Q3V1V3 845 aaKnown RBP21.74■■□□□ 1.07
Lime1-201ENSMUST00000048077 Gab3Q8BSM5 595 aa21.72■■□□□ 1.07
Lime1-201ENSMUST00000048077 Cc2d2aQ8CFW7 1633 aa21.67■■□□□ 1.06
Lime1-201ENSMUST00000048077 Fmn1Q05860 1466 aa21.65■■□□□ 1.06
Lime1-201ENSMUST00000048077 Pcgf6Q99NA9 353 aa21.59■■□□□ 1.05
Lime1-201ENSMUST00000048077 Iqgap2Q3UQ44 1575 aa21.56■■□□□ 1.04
Lime1-201ENSMUST00000048077 Top2aQ01320 1528 aaKnown RBP21.56■■□□□ 1.04
Lime1-201ENSMUST00000048077 Rapgef2Q8CHG7 1496 aa21.55■■□□□ 1.04
Lime1-201ENSMUST00000048077 Atad2bE9Q166 1460 aaKnown RBP21.47■■□□□ 1.03
Lime1-201ENSMUST00000048077 NefmP08553 848 aa21.45■■□□□ 1.02
Lime1-201ENSMUST00000048077 Pds5bQ4VA53 1446 aaKnown RBP21.35■■□□□ 1.01
Lime1-201ENSMUST00000048077 Cep162Q6ZQ06 1403 aa21.32■■□□□ 1
Lime1-201ENSMUST00000048077 TnnQ80Z71 1560 aa21.32■■□□□ 1
Lime1-201ENSMUST00000048077 Mier1Q5UAK0 511 aa21.32■■□□□ 1
Lime1-201ENSMUST00000048077 Eif4g1Q6NZJ6 1600 aaKnown RBP21.25■□□□□ 0.99
Lime1-201ENSMUST00000048077 Supt5hO55201 1082 aaKnown RBP21.22■□□□□ 0.99
Lime1-201ENSMUST00000048077 Wdr62Q3U3T8 1523 aa21.14■□□□□ 0.97
Lime1-201ENSMUST00000048077 Frmpd1A2AKB4 1549 aa21.1■□□□□ 0.97
Lime1-201ENSMUST00000048077 Lamc3Q9R0B6 1581 aa21.09■□□□□ 0.97
Lime1-201ENSMUST00000048077 NrkQ9R0G8 1455 aa21.01■□□□□ 0.95
Lime1-201ENSMUST00000048077 Npm2Q80W85 207 aa20.99■□□□□ 0.95
Lime1-201ENSMUST00000048077 Zeb1Q64318 1117 aa20.97■□□□□ 0.95
Lime1-201ENSMUST00000048077 UbtfP25976 765 aaKnown RBP20.96■□□□□ 0.95
Lime1-201ENSMUST00000048077 Clip1Q922J3 1391 aa20.95■□□□□ 0.94
Lime1-201ENSMUST00000048077 Myt1lP97500 1187 aa20.95■□□□□ 0.94
Lime1-201ENSMUST00000048077 Arhgap35Q91YM2 1499 aa20.95■□□□□ 0.94
Lime1-201ENSMUST00000048077 Ercc6F8VPZ5 1481 aa20.94■□□□□ 0.94
Lime1-201ENSMUST00000048077 Unc13aQ4KUS2 1712 aa20.91■□□□□ 0.94
Lime1-201ENSMUST00000048077 Map3k1P53349 1493 aa20.89■□□□□ 0.94
Lime1-201ENSMUST00000048077 Camsap1A2AHC3 1581 aa20.88■□□□□ 0.93
Lime1-201ENSMUST00000048077 Shroom4Q1W617 1475 aa20.87■□□□□ 0.93
Lime1-201ENSMUST00000048077 PtprkP35822 1457 aa20.85■□□□□ 0.93
Lime1-201ENSMUST00000048077 Kif15Q6P9L6 1387 aa20.84■□□□□ 0.93
Lime1-201ENSMUST00000048077 Ccdc18Q640L5 1455 aa20.82■□□□□ 0.92
Lime1-201ENSMUST00000048077 Eea1Q8BL66 1411 aa20.81■□□□□ 0.92
Lime1-201ENSMUST00000048077 Ncapd3Q6ZQK0 1506 aa20.8■□□□□ 0.92
Lime1-201ENSMUST00000048077 Las1lA2BE28 776 aaKnown RBP20.77■□□□□ 0.92
Lime1-201ENSMUST00000048077 Sall2Q9QX96 1004 aa20.77■□□□□ 0.92
Lime1-201ENSMUST00000048077 Arhgef5E9Q7D5 1581 aa20.74■□□□□ 0.91
Lime1-201ENSMUST00000048077 Grin2bQ01097 1482 aa20.74■□□□□ 0.91
Lime1-201ENSMUST00000048077 Arap1Q4LDD4 1452 aa20.74■□□□□ 0.91
Lime1-201ENSMUST00000048077 Mroh2bQ7M6Y6 1581 aa20.67■□□□□ 0.9
Lime1-201ENSMUST00000048077 Plekhg3Q4VAC9 1341 aa20.67■□□□□ 0.9
Lime1-201ENSMUST00000048077 Erich3F6QRE9 1637 aa20.67■□□□□ 0.9
Lime1-201ENSMUST00000048077 AqrQ8CFQ3 1481 aaKnown RBP20.67■□□□□ 0.9
Lime1-201ENSMUST00000048077 Setd5Q5XJV7 1441 aa20.64■□□□□ 0.89
Lime1-201ENSMUST00000048077 Neurod1Q60867 357 aa20.63■□□□□ 0.89
Lime1-201ENSMUST00000048077 Phldb1Q6PDH0 1371 aaKnown RBP20.62■□□□□ 0.89
Lime1-201ENSMUST00000048077 Tiam1Q60610 1591 aa20.62■□□□□ 0.89
Lime1-201ENSMUST00000048077 Thoc2B1AZI6 1594 aaKnown RBP20.61■□□□□ 0.89
Lime1-201ENSMUST00000048077 ClspnQ80YR7 1315 aa20.59■□□□□ 0.89
Lime1-201ENSMUST00000048077 TonslQ6NZL6 1363 aa20.59■□□□□ 0.89
Lime1-201ENSMUST00000048077 Il27Q8K3I6 234 aa20.58■□□□□ 0.89
Lime1-201ENSMUST00000048077 TchhA0A0B4J1F9 1599 aa20.56■□□□□ 0.88
Lime1-201ENSMUST00000048077 Ankrd26Q811D2 1581 aa20.55■□□□□ 0.88
Lime1-201ENSMUST00000048077 Kdm5bQ80Y84 1544 aa20.55■□□□□ 0.88
Lime1-201ENSMUST00000048077 Baz1bQ9Z277 1479 aa20.53■□□□□ 0.88
Lime1-201ENSMUST00000048077 Efcab5A0JP43 1406 aa20.53■□□□□ 0.88
Lime1-201ENSMUST00000048077 Aebp2Q9Z248 504 aaKnown RBP20.52■□□□□ 0.88
Lime1-201ENSMUST00000048077 Wdr66E9Q743 1299 aa20.48■□□□□ 0.87
Lime1-201ENSMUST00000048077 Cux2P70298 1426 aa20.48■□□□□ 0.87
Lime1-201ENSMUST00000048077 Naip1Q9QWK5 1403 aa20.48■□□□□ 0.87
Lime1-201ENSMUST00000048077 Lmo7E9PYF4 1699 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms