RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 PplQ9R269 1755 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Zc3h13E9Q784 1729 aaKnown RBP9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Cog6Q8R3I3 657 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Smarca5Q91ZW3 1051 aaKnown RBP9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Nwd1A6H603 1563 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ankrd44B2RXR6 993 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Dnai1Q8C0M8 701 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Amotl1Q9D4H4 968 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Slit3Q9WVB4 1523 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Kdm2bQ6P1G2 1309 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Atl3Q91YH5 541 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Adamtsl3G3UXC7 1706 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Pnmal2G3X9N3 661 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 4933416C03RikQ3V063 378 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 ThemisQ8BGW0 636 aa9.74□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ppp2r3aB2RXC8 1150 aa9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Hsp90b1P08113 802 aaKnown RBP9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Cwc27Q3TKY6 469 aa9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Kif18aQ91WD7 886 aa9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Cdk12Q14AX6 1484 aaKnown RBP9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 4930572O03RikQ8C5Y0 211 aa9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Pik3c2bE9QAN8 1632 aa9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ncapd2Q8K2Z4 1392 aa9.73□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 PsapQ61207 557 aaKnown RBP9.72□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Slc5a1Q8C3K6 665 aa9.72□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 CemipQ8BI06 1361 aa9.72□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Srgap3Q812A2 1099 aa9.72□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Sipa1l1Q8C0T5 1782 aa9.71□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Abcc10Q8R4P9 1501 aa9.71□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Gnai2P08752 355 aaKnown RBP9.71□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 CarsQ9ER72 831 aaKnown RBP9.71□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 TefQ9JLC6 301 aa9.71□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Nek4Q9Z1J2 792 aa9.71□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ttc41Q692V3 1318 aa9.71□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Zap70P43404 618 aa9.71□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Arhgef1Q61210 920 aaKnown RBP9.71□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Ano8Q6PB70 1060 aa9.71□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Rims2Q9EQZ7 1530 aa9.71□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Eif3bQ8JZQ9 803 aaKnown RBP9.7□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Cps1Q8C196 1500 aa9.7□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Plekhd1B2RPU2 505 aa9.7□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Slc39a6Q8C145 765 aa9.7□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Fam135bQ9DAI6 1403 aa9.7□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Card10P58660 1021 aa9.7□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Sf3b2Q3UJB0 878 aaKnown RBP9.7□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Stk11ipQ3TAA7 1072 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 RgmbQ7TQ33 436 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Ncbp3Q8BZR9 615 aaKnown RBP9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 ZgpatQ8VDM1 511 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Chmp3Q9CQ10 224 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Kif24Q6NWW5 1356 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 DiexfQ8BTT6 772 aaKnown RBP9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 FanclQ9CR14 375 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Q9D2X8 372 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Brpf1B2RRD7 1212 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Iqsec2Q5DU25 1478 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Smg7Q5RJH6 1138 aaKnown RBP9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 ApobrQ8VBT6 942 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 GckrQ91X44 587 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Pdzd9Q9D9M4 266 aa9.69□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Jarid2Q62315 1234 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Ppp1r42Q8R1Z4 357 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 AampJ3QN89 436 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 AppP12023 770 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Brinp3Q499E0 766 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Egfem1Q8C088 590 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Prkab2Q6PAM0 271 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Cyp2d12Q8BVD2 504 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Nphp1Q9QY53 687 aa9.68□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Prdm2A2A7B5 1709 aaKnown RBP9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Chd4Q6PDQ2 1915 aaKnown RBP9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Tom1O88746 492 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Chl1P70232 1209 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Map3k2Q61083 619 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 BcanQ61361 883 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Clcn1Q64347 994 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Fam13aQ8BGI4 693 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Amigo3Q8C2S7 508 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Chmp4cQ9D7F7 232 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Hmox1P14901 289 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Trim27Q62158 513 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Cavin2Q63918 418 aaKnown RBP9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Larp1Q6ZQ58 1072 aaKnown RBP9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Chd2E9PZM4 1827 aaKnown RBP9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Vsig10D3YX43 558 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Ppp1r37Q8BKR5 712 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Phkg2Q9DB30 406 aa9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Foxp4Q9DBY0 795 aaKnown RBP9.67□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Qtrt2B8ZXI1 415 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Eif4a1P60843 406 aaKnown RBP9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Cgnl1Q6AW69 1298 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Tceal9Q9DD24 104 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Cyp46a1Q9WVK8 500 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Neurod6P48986 337 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Asic4Q7TNS7 539 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 PigbQ9JJQ0 542 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 TnrQ8BYI9 1358 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Bcl9Q9D219 1425 aa9.66□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Cadps2Q8BYR5 1297 aa9.65□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Cetn4Q8K4K1 168 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms