Protein–RNA interactions for Protein: Q8C3K6

Slc5a1, Sodium/glucose cotransporter 1, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a1Q8C3K6 Gm25239-201ENSMUST00000174915 86 ntBASIC50.83■■■■■ 5.73
Slc5a1Q8C3K6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC47.12■■■■■ 5.13
Slc5a1Q8C3K6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC46.42■■■■■ 5.02
Slc5a1Q8C3K6 Gm15042-201ENSMUST00000120212 883 ntBASIC44.18■■■■■ 4.66
Slc5a1Q8C3K6 Gm24109-201ENSMUST00000175489 103 ntBASIC44.16■■■■■ 4.66
Slc5a1Q8C3K6 Gm15045-201ENSMUST00000117359 883 ntBASIC43.17■■■■■ 4.5
Slc5a1Q8C3K6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
Slc5a1Q8C3K6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42.93■■■■■ 4.46
Slc5a1Q8C3K6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC42.74■■■■■ 4.43
Slc5a1Q8C3K6 Gm23366-201ENSMUST00000175022 89 ntBASIC42.41■■■■■ 4.38
Slc5a1Q8C3K6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.25■■■■■ 4.35
Slc5a1Q8C3K6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC42.21■■■■■ 4.35
Slc5a1Q8C3K6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.26
Slc5a1Q8C3K6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41.28■■■■■ 4.2
Slc5a1Q8C3K6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC41.25■■■■■ 4.19
Slc5a1Q8C3K6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC40.95■■■■■ 4.15
Slc5a1Q8C3K6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.92■■■■■ 4.14
Slc5a1Q8C3K6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC40.86■■■■■ 4.13
Slc5a1Q8C3K6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC40.84■■■■■ 4.13
Slc5a1Q8C3K6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Slc5a1Q8C3K6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC40.45■■■■■ 4.07
Slc5a1Q8C3K6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
Slc5a1Q8C3K6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
Slc5a1Q8C3K6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
Slc5a1Q8C3K6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
Slc5a1Q8C3K6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC40.28■■■■■ 4.04
Slc5a1Q8C3K6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
Slc5a1Q8C3K6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40.2■■■■■ 4.03
Slc5a1Q8C3K6 Gm25238-201ENSMUST00000174914 89 ntBASIC40.2■■■■■ 4.03
Slc5a1Q8C3K6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Slc5a1Q8C3K6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC39.83■■■■□ 3.97
Slc5a1Q8C3K6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC39.79■■■■□ 3.96
Slc5a1Q8C3K6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC39.53■■■■□ 3.92
Slc5a1Q8C3K6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC39.4■■■■□ 3.9
Slc5a1Q8C3K6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
Slc5a1Q8C3K6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.18■■■■□ 3.86
Slc5a1Q8C3K6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
Slc5a1Q8C3K6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC39.05■■■■□ 3.84
Slc5a1Q8C3K6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39■■■■□ 3.83
Slc5a1Q8C3K6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
Slc5a1Q8C3K6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38.97■■■■□ 3.83
Slc5a1Q8C3K6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38.9■■■■□ 3.82
Slc5a1Q8C3K6 Psd-208ENSMUST00000224556 2034 ntBASIC38.68■■■■□ 3.78
Slc5a1Q8C3K6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC38.68■■■■□ 3.78
Slc5a1Q8C3K6 Gm27325-201ENSMUST00000175467 74 ntBASIC38.67■■■■□ 3.78
Slc5a1Q8C3K6 Gm25262-201ENSMUST00000174934 133 ntBASIC38.63■■■■□ 3.77
Slc5a1Q8C3K6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC38.6■■■■□ 3.77
Slc5a1Q8C3K6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Slc5a1Q8C3K6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
Slc5a1Q8C3K6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.24■■■■□ 3.71
Slc5a1Q8C3K6 Rab21-202ENSMUST00000218831 843 ntBASIC38.13■■■■□ 3.69
Slc5a1Q8C3K6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC38.05■■■■□ 3.68
Slc5a1Q8C3K6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Slc5a1Q8C3K6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38.04■■■■□ 3.68
Slc5a1Q8C3K6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC37.95■■■■□ 3.67
Slc5a1Q8C3K6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC37.95■■■■□ 3.67
Slc5a1Q8C3K6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC37.92■■■■□ 3.66
Slc5a1Q8C3K6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC37.88■■■■□ 3.66
Slc5a1Q8C3K6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
Slc5a1Q8C3K6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
Slc5a1Q8C3K6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Slc5a1Q8C3K6 Gm26115-201ENSMUST00000175605 87 ntBASIC37.76■■■■□ 3.64
Slc5a1Q8C3K6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC37.73■■■■□ 3.63
Slc5a1Q8C3K6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
Slc5a1Q8C3K6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC37.65■■■■□ 3.62
Slc5a1Q8C3K6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC37.63■■■■□ 3.61
Slc5a1Q8C3K6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.61■■■■□ 3.61
Slc5a1Q8C3K6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Slc5a1Q8C3K6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Slc5a1Q8C3K6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Slc5a1Q8C3K6 Gm8109-201ENSMUST00000194076 746 ntBASIC37.53■■■■□ 3.6
Slc5a1Q8C3K6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC37.46■■■■□ 3.59
Slc5a1Q8C3K6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC37.45■■■■□ 3.59
Slc5a1Q8C3K6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC37.43■■■■□ 3.58
Slc5a1Q8C3K6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC37.37■■■■□ 3.57
Slc5a1Q8C3K6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Slc5a1Q8C3K6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
Slc5a1Q8C3K6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Slc5a1Q8C3K6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
Slc5a1Q8C3K6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37.25■■■■□ 3.55
Slc5a1Q8C3K6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
Slc5a1Q8C3K6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC37.16■■■■□ 3.54
Slc5a1Q8C3K6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
Slc5a1Q8C3K6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC37.1■■■■□ 3.53
Slc5a1Q8C3K6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37.07■■■■□ 3.53
Slc5a1Q8C3K6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
Slc5a1Q8C3K6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36.98■■■■□ 3.51
Slc5a1Q8C3K6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC36.86■■■■□ 3.49
Slc5a1Q8C3K6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Slc5a1Q8C3K6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Slc5a1Q8C3K6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36.83■■■■□ 3.49
Slc5a1Q8C3K6 Gm17082-201ENSMUST00000166043 1091 ntBASIC36.81■■■■□ 3.48
Slc5a1Q8C3K6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Slc5a1Q8C3K6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC36.75■■■■□ 3.47
Slc5a1Q8C3K6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36.74■■■■□ 3.47
Slc5a1Q8C3K6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
Slc5a1Q8C3K6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Slc5a1Q8C3K6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Slc5a1Q8C3K6 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.58■■■■□ 3.45
Slc5a1Q8C3K6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms