Protein–RNA interactions for Protein: Q8C2S7

Amigo3, Amphoterin-induced protein 3, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Amigo3Q8C2S7 Gm25239-201ENSMUST00000174915 86 ntBASIC56,27■■■■■ 6,6
Amigo3Q8C2S7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC52,52■■■■■ 6
Amigo3Q8C2S7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC51,51■■■■■ 5,84
Amigo3Q8C2S7 Gm24109-201ENSMUST00000175489 103 ntBASIC49,31■■■■■ 5,48
Amigo3Q8C2S7 Gm15042-201ENSMUST00000120212 883 ntBASIC48,13■■■■■ 5,3
Amigo3Q8C2S7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC47,59■■■■■ 5,21
Amigo3Q8C2S7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC47,41■■■■■ 5,18
Amigo3Q8C2S7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC47,27■■■■■ 5,16
Amigo3Q8C2S7 Gm15045-201ENSMUST00000117359 883 ntBASIC47,05■■■■■ 5,12
Amigo3Q8C2S7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC46,98■■■■■ 5,11
Amigo3Q8C2S7 Gm23366-201ENSMUST00000175022 89 ntBASIC46,73■■■■■ 5,07
Amigo3Q8C2S7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC46,34■■■■■ 5,01
Amigo3Q8C2S7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC45,88■■■■■ 4,94
Amigo3Q8C2S7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC45,81■■■■■ 4,92
Amigo3Q8C2S7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC45,8■■■■■ 4,92
Amigo3Q8C2S7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC45,7■■■■■ 4,91
Amigo3Q8C2S7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC45,09■■■■■ 4,81
Amigo3Q8C2S7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC45■■■■■ 4,79
Amigo3Q8C2S7 Gm25238-201ENSMUST00000174914 89 ntBASIC44,83■■■■■ 4,77
Amigo3Q8C2S7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC44,67■■■■■ 4,74
Amigo3Q8C2S7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC44,66■■■■■ 4,74
Amigo3Q8C2S7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC44,65■■■■■ 4,74
Amigo3Q8C2S7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC43,7■■■■■ 4,59
Amigo3Q8C2S7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC43,61■■■■■ 4,57
Amigo3Q8C2S7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC43,51■■■■■ 4,56
Amigo3Q8C2S7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC43,25■■■■■ 4,51
Amigo3Q8C2S7 Gm25262-201ENSMUST00000174934 133 ntBASIC43,21■■■■■ 4,51
Amigo3Q8C2S7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC43,16■■■■■ 4,5
Amigo3Q8C2S7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC43,06■■■■■ 4,48
Amigo3Q8C2S7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42,98■■■■■ 4,47
Amigo3Q8C2S7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC42,93■■■■■ 4,46
Amigo3Q8C2S7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC42,91■■■■■ 4,46
Amigo3Q8C2S7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC42,72■■■■■ 4,43
Amigo3Q8C2S7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC42,67■■■■■ 4,42
Amigo3Q8C2S7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC42,65■■■■■ 4,42
Amigo3Q8C2S7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC42,62■■■■■ 4,41
Amigo3Q8C2S7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC42,55■■■■■ 4,4
Amigo3Q8C2S7 Gm26115-201ENSMUST00000175605 87 ntBASIC42,54■■■■■ 4,4
Amigo3Q8C2S7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC42,44■■■■■ 4,38
Amigo3Q8C2S7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC42,43■■■■■ 4,38
Amigo3Q8C2S7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC42,41■■■■■ 4,38
Amigo3Q8C2S7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC42,31■■■■■ 4,36
Amigo3Q8C2S7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC42,29■■■■■ 4,36
Amigo3Q8C2S7 Gm8109-201ENSMUST00000194076 746 ntBASIC42,29■■■■■ 4,36
Amigo3Q8C2S7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC42,23■■■■■ 4,35
Amigo3Q8C2S7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC42,22■■■■■ 4,35
Amigo3Q8C2S7 Gm27325-201ENSMUST00000175467 74 ntBASIC42,06■■■■■ 4,32
Amigo3Q8C2S7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC42■■■■■ 4,31
Amigo3Q8C2S7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC41,88■■■■■ 4,29
Amigo3Q8C2S7 Rab21-202ENSMUST00000218831 843 ntBASIC41,87■■■■■ 4,29
Amigo3Q8C2S7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC41,86■■■■■ 4,29
Amigo3Q8C2S7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41,82■■■■■ 4,29
Amigo3Q8C2S7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC41,78■■■■■ 4,28
Amigo3Q8C2S7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC41,67■■■■■ 4,26
Amigo3Q8C2S7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC41,66■■■■■ 4,26
Amigo3Q8C2S7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC41,58■■■■■ 4,25
Amigo3Q8C2S7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC41,47■■■■■ 4,23
Amigo3Q8C2S7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC41,44■■■■■ 4,22
Amigo3Q8C2S7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC41,42■■■■■ 4,22
Amigo3Q8C2S7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC41,24■■■■■ 4,19
Amigo3Q8C2S7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC41,24■■■■■ 4,19
Amigo3Q8C2S7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC41,16■■■■■ 4,18
Amigo3Q8C2S7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC41,1■■■■■ 4,17
Amigo3Q8C2S7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC40,96■■■■■ 4,15
Amigo3Q8C2S7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC40,93■■■■■ 4,14
Amigo3Q8C2S7 Gm24804-201ENSMUST00000174982 85 ntBASIC40,87■■■■■ 4,13
Amigo3Q8C2S7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC40,86■■■■■ 4,13
Amigo3Q8C2S7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC40,74■■■■■ 4,11
Amigo3Q8C2S7 Gm17082-201ENSMUST00000166043 1091 ntBASIC40,73■■■■■ 4,11
Amigo3Q8C2S7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC40,7■■■■■ 4,11
Amigo3Q8C2S7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC40,68■■■■■ 4,1
Amigo3Q8C2S7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC40,67■■■■■ 4,1
Amigo3Q8C2S7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC40,59■■■■■ 4,09
Amigo3Q8C2S7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC40,55■■■■■ 4,08
Amigo3Q8C2S7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40,52■■■■■ 4,08
Amigo3Q8C2S7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC40,48■■■■■ 4,07
Amigo3Q8C2S7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40,28■■■■■ 4,04
Amigo3Q8C2S7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC40,27■■■■■ 4,04
Amigo3Q8C2S7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC40,21■■■■■ 4,03
Amigo3Q8C2S7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC40,2■■■■■ 4,03
Amigo3Q8C2S7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC40,17■■■■■ 4,02
Amigo3Q8C2S7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC40,09■■■■■ 4,01
Amigo3Q8C2S7 Gm27322-201ENSMUST00000184007 104 ntBASIC40,08■■■■■ 4,01
Amigo3Q8C2S7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC40,08■■■■■ 4,01
Amigo3Q8C2S7 Zfp131-205ENSMUST00000223812 663 ntBASIC40,05■■■■■ 4
Amigo3Q8C2S7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC40,04■■■■■ 4
Amigo3Q8C2S7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC40,02■■■■■ 4
Amigo3Q8C2S7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC39,97■■■■□ 3,99
Amigo3Q8C2S7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC39,97■■■■□ 3,99
Amigo3Q8C2S7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC39,95■■■■□ 3,99
Amigo3Q8C2S7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC39,93■■■■□ 3,98
Amigo3Q8C2S7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC39,92■■■■□ 3,98
Amigo3Q8C2S7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC39,9■■■■□ 3,98
Amigo3Q8C2S7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC39,84■■■■□ 3,97
Amigo3Q8C2S7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC39,84■■■■□ 3,97
Amigo3Q8C2S7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC39,83■■■■□ 3,97
Amigo3Q8C2S7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC39,83■■■■□ 3,97
Amigo3Q8C2S7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC39,82■■■■□ 3,97
Amigo3Q8C2S7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC39,81■■■■□ 3,96
Amigo3Q8C2S7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC39,78■■■■□ 3,96
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms