Protein–RNA interactions for Protein: Q8C2S7

Amigo3, Amphoterin-induced protein 3, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Amigo3Q8C2S7 Gm25239-201ENSMUST00000174915 86 ntBASIC56.27■■■■■ 6.6
Amigo3Q8C2S7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC52.52■■■■■ 6
Amigo3Q8C2S7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC51.51■■■■■ 5.84
Amigo3Q8C2S7 Gm24109-201ENSMUST00000175489 103 ntBASIC49.31■■■■■ 5.48
Amigo3Q8C2S7 Gm15042-201ENSMUST00000120212 883 ntBASIC48.13■■■■■ 5.3
Amigo3Q8C2S7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC47.59■■■■■ 5.21
Amigo3Q8C2S7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC47.41■■■■■ 5.18
Amigo3Q8C2S7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC47.27■■■■■ 5.16
Amigo3Q8C2S7 Gm15045-201ENSMUST00000117359 883 ntBASIC47.05■■■■■ 5.12
Amigo3Q8C2S7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC46.98■■■■■ 5.11
Amigo3Q8C2S7 Gm23366-201ENSMUST00000175022 89 ntBASIC46.73■■■■■ 5.07
Amigo3Q8C2S7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC46.34■■■■■ 5.01
Amigo3Q8C2S7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC45.88■■■■■ 4.94
Amigo3Q8C2S7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC45.81■■■■■ 4.92
Amigo3Q8C2S7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC45.8■■■■■ 4.92
Amigo3Q8C2S7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC45.7■■■■■ 4.91
Amigo3Q8C2S7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC45.09■■■■■ 4.81
Amigo3Q8C2S7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC45■■■■■ 4.79
Amigo3Q8C2S7 Gm25238-201ENSMUST00000174914 89 ntBASIC44.83■■■■■ 4.77
Amigo3Q8C2S7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC44.67■■■■■ 4.74
Amigo3Q8C2S7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC44.66■■■■■ 4.74
Amigo3Q8C2S7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC44.65■■■■■ 4.74
Amigo3Q8C2S7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC43.7■■■■■ 4.59
Amigo3Q8C2S7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC43.61■■■■■ 4.57
Amigo3Q8C2S7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC43.51■■■■■ 4.56
Amigo3Q8C2S7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC43.25■■■■■ 4.51
Amigo3Q8C2S7 Gm25262-201ENSMUST00000174934 133 ntBASIC43.21■■■■■ 4.51
Amigo3Q8C2S7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC43.16■■■■■ 4.5
Amigo3Q8C2S7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC43.06■■■■■ 4.48
Amigo3Q8C2S7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42.98■■■■■ 4.47
Amigo3Q8C2S7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC42.93■■■■■ 4.46
Amigo3Q8C2S7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC42.91■■■■■ 4.46
Amigo3Q8C2S7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC42.72■■■■■ 4.43
Amigo3Q8C2S7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC42.67■■■■■ 4.42
Amigo3Q8C2S7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC42.65■■■■■ 4.42
Amigo3Q8C2S7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC42.62■■■■■ 4.41
Amigo3Q8C2S7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC42.55■■■■■ 4.4
Amigo3Q8C2S7 Gm26115-201ENSMUST00000175605 87 ntBASIC42.54■■■■■ 4.4
Amigo3Q8C2S7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC42.44■■■■■ 4.38
Amigo3Q8C2S7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC42.43■■■■■ 4.38
Amigo3Q8C2S7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC42.41■■■■■ 4.38
Amigo3Q8C2S7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC42.31■■■■■ 4.36
Amigo3Q8C2S7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC42.29■■■■■ 4.36
Amigo3Q8C2S7 Gm8109-201ENSMUST00000194076 746 ntBASIC42.29■■■■■ 4.36
Amigo3Q8C2S7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC42.23■■■■■ 4.35
Amigo3Q8C2S7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC42.22■■■■■ 4.35
Amigo3Q8C2S7 Gm27325-201ENSMUST00000175467 74 ntBASIC42.06■■■■■ 4.32
Amigo3Q8C2S7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC42■■■■■ 4.31
Amigo3Q8C2S7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC41.88■■■■■ 4.29
Amigo3Q8C2S7 Rab21-202ENSMUST00000218831 843 ntBASIC41.87■■■■■ 4.29
Amigo3Q8C2S7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC41.86■■■■■ 4.29
Amigo3Q8C2S7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.82■■■■■ 4.29
Amigo3Q8C2S7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC41.78■■■■■ 4.28
Amigo3Q8C2S7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC41.67■■■■■ 4.26
Amigo3Q8C2S7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC41.66■■■■■ 4.26
Amigo3Q8C2S7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC41.58■■■■■ 4.25
Amigo3Q8C2S7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC41.47■■■■■ 4.23
Amigo3Q8C2S7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC41.44■■■■■ 4.22
Amigo3Q8C2S7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
Amigo3Q8C2S7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC41.24■■■■■ 4.19
Amigo3Q8C2S7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
Amigo3Q8C2S7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Amigo3Q8C2S7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
Amigo3Q8C2S7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
Amigo3Q8C2S7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Amigo3Q8C2S7 Gm24804-201ENSMUST00000174982 85 ntBASIC40.87■■■■■ 4.13
Amigo3Q8C2S7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC40.86■■■■■ 4.13
Amigo3Q8C2S7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC40.74■■■■■ 4.11
Amigo3Q8C2S7 Gm17082-201ENSMUST00000166043 1091 ntBASIC40.73■■■■■ 4.11
Amigo3Q8C2S7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC40.7■■■■■ 4.11
Amigo3Q8C2S7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC40.68■■■■■ 4.1
Amigo3Q8C2S7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC40.67■■■■■ 4.1
Amigo3Q8C2S7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC40.59■■■■■ 4.09
Amigo3Q8C2S7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC40.55■■■■■ 4.08
Amigo3Q8C2S7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40.52■■■■■ 4.08
Amigo3Q8C2S7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC40.48■■■■■ 4.07
Amigo3Q8C2S7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40.28■■■■■ 4.04
Amigo3Q8C2S7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Amigo3Q8C2S7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC40.21■■■■■ 4.03
Amigo3Q8C2S7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
Amigo3Q8C2S7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC40.17■■■■■ 4.02
Amigo3Q8C2S7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
Amigo3Q8C2S7 Gm27322-201ENSMUST00000184007 104 ntBASIC40.08■■■■■ 4.01
Amigo3Q8C2S7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC40.08■■■■■ 4.01
Amigo3Q8C2S7 Zfp131-205ENSMUST00000223812 663 ntBASIC40.05■■■■■ 4
Amigo3Q8C2S7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
Amigo3Q8C2S7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
Amigo3Q8C2S7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC39.97■■■■□ 3.99
Amigo3Q8C2S7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC39.97■■■■□ 3.99
Amigo3Q8C2S7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC39.95■■■■□ 3.99
Amigo3Q8C2S7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC39.93■■■■□ 3.98
Amigo3Q8C2S7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC39.92■■■■□ 3.98
Amigo3Q8C2S7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
Amigo3Q8C2S7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC39.84■■■■□ 3.97
Amigo3Q8C2S7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC39.84■■■■□ 3.97
Amigo3Q8C2S7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC39.83■■■■□ 3.97
Amigo3Q8C2S7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC39.83■■■■□ 3.97
Amigo3Q8C2S7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC39.82■■■■□ 3.97
Amigo3Q8C2S7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC39.81■■■■□ 3.96
Amigo3Q8C2S7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms