RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Cavin2Q63918 418 aaKnown RBP11.55□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Bcl11aQ9QYE3 773 aa11.55□□□□□ -0.56
Cldn1-201ENSMUST00000023154 TatQ8QZR1 454 aa11.55□□□□□ -0.56
Cldn1-201ENSMUST00000023154 GnpatP98192 678 aa11.54□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Atl3Q91YH5 541 aa11.54□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Rad17Q6NXW6 688 aa11.54□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Msh6P54276 1358 aaKnown RBP11.53□□□□□ -0.56
Cldn1-201ENSMUST00000023154 HypkQ9CR41 129 aa11.53□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Wnk3Q80XP9 1757 aa11.53□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ipo8Q7TMY7 1010 aa11.52□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Amigo3Q8C2S7 508 aa11.52□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Gimap6Q8K349 305 aa11.52□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Cyp2d12Q8BVD2 504 aa11.52□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Nkx2-3P97334 362 aa11.52□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Farp2Q91VS8 1065 aa11.52□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Gli3Q61602 1583 aa11.52□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Eif2s2Q99L45 331 aaKnown RBP11.51□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Hs1bp3Q3TC93 395 aa11.51□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Dzip1Q8BMD2 852 aa11.51□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Foxp4Q9DBY0 795 aaKnown RBP11.51□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Nup153E9Q3G8 1462 aaKnown RBP11.51□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Zfp777B9EKF4 885 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 SkilQ60665 675 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Fam83gQ5SWY7 812 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Pip4k2bQ80XI4 416 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Kcnh5Q920E3 988 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Phlpp2Q8BXA7 1320 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Kdm6aO70546 1401 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 DaxxO35613 739 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Kcna6Q61923 529 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Sart3Q9JLI8 962 aaKnown RBP11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Nid2O88322 1403 aa11.5□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Phf23Q8BSN5 401 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 TnrQ8BYI9 1358 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Ltbp4Q8K4G1 1666 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Myo5bP21271 1818 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Igsf1Q7TQA1 1317 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Fmnl2A2APV2 1086 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Brd1E9PZ26 1189 aaKnown RBP11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Rapgef3Q8VCC8 918 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Kif18aQ91WD7 886 aa11.49□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Tnnt1O88346 262 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Hsp90ab1P11499 724 aaKnown RBP11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Trim27Q62158 513 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Ppp1r37Q8BKR5 712 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Triml2E9PW10 424 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Gsdma3Q5Y4Y6 464 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Sv2bQ8BG39 683 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Irx6Q9ER75 438 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Chpf2Q3UU43 768 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Rab11fip3Q8CHD8 1047 aa11.48□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Dlg5E9Q9R9 1921 aa11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Scaf1Q5U4C3 1256 aaKnown RBP11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Dixdc1Q80Y83 711 aa11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Dnai1Q8C0M8 701 aa11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Cog6Q8R3I3 657 aa11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Amotl1Q9D4H4 968 aa11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Q3TQI7 289 aaKnown RBP11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 DiexfQ8BTT6 772 aaKnown RBP11.47□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Col15a1O35206 1367 aa11.46□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Arhgef1Q61210 920 aaKnown RBP11.46□□□□□ -0.57
Cldn1-201ENSMUST00000023154 Brwd3A2AHJ4 1799 aa11.46□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Atf3Q60765 181 aa11.46□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Aldh1l2Q8K009 923 aa11.46□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Atf5O70191 283 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 CarsQ9ER72 831 aaKnown RBP11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Aox2Q5SGK3 1345 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Hsp90aa1P07901 733 aaKnown RBP11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Prkar2bP31324 416 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Tmc1Q8R4P5 757 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Pnpla7A2AJ88 1352 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Cyp2d11P24457 504 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 LifrP42703 1092 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Tm6sf1P58749 370 aa11.45□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Tbc1d32Q3URV1 1296 aa11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Mfap1aC0HKD8 439 aaKnown RBP11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Mfap1bC0HKD9 439 aaKnown RBP11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 4933416C03RikQ3V063 378 aa11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Wwc1Q5SXA9 1104 aa11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Ppm1gQ61074 542 aa11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Fam13aQ8BGI4 693 aa11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 FanclQ9CR14 375 aa11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Chmp4bQ9D8B3 224 aaKnown RBP11.44□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Cc2d1aQ8K1A6 943 aa11.43□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Gm21698A0A087WQP8 267 aa11.43□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Gm10471E9Q1C7 252 aa11.43□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Gm21671G3UY31 267 aa11.43□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Map7O88735 730 aa11.43□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Eif4a1P60843 406 aaKnown RBP11.43□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Smarca5Q91ZW3 1051 aaKnown RBP11.43□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Disp3A3KFU9 1347 aa11.42□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Wdr63B2RY71 923 aa11.42□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Ppp1r9bQ6R891 817 aaKnown RBP11.42□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Nol11Q8BJW5 723 aaKnown RBP11.42□□□□□ -0.58
Cldn1-201ENSMUST00000023154 OptnQ8K3K8 584 aa11.42□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Kif2cQ922S8 721 aa11.42□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Fgd1P52734 960 aa11.41□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Abca15E9PWH4 1668 aa11.41□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Simc1E9Q6E9 1354 aa11.41□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Abcc12Q80WJ6 1366 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms